Neodiprion pinetum (white pine sawfly): 124213854
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Entry
124213854 CDS
T08966
Name
(RefSeq) DDB1- and CUL4-associated factor 8 isoform X1
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npt04121
]
124213854
Ubiquitin system [BR:
npt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124213854
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
124213854
NCBI-ProteinID:
XP_046471505
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Position
3:43692522..43700428
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AA seq
745 aa
AA seq
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MECEDDDELMCGTGKSKSHETELNGINKVIAETVANKNENNAAQAICTENKDDRVHITEK
SHYSLKTDDSKEGEMWPQPSEMVTNDSQQQVELSEESNLMKSGLDSKDQGTTTSIGEFTQ
SKRGISEGQEDGDRLSNNESKYSLDTDSSKRQKTDENVNGSREANSRNEVPTQFHKLKSK
VRKRNYRVKQNVQDEAHDSSDDLLTGESTGEETEAIDGDVAQSEYDLPSTVNEESNLSSH
LDIAEDTNDESEENSEGQEDDHTGDDNSNEWTSASESMSSNEPVHPVLSKEKPKPQWFIV
PELINRQLGCNRLFQSRLYGSLHTVERLELMYKLKEHKGCVNTLSFNQRGNYLASGSDDL
MVVIWDWPLGKKHESFKTGHTSNVFQASWLPLPSEHLMVTCARDGHVRLTDLHKSSVDYS
RRLAAHQGPATKLSIHPEIPHVILSVGEDAKVFAIDIRQNKPTTLLTVKEGQSQVALYSI
NSNPFNSNEFCLGGRDQYVRLYDKRKVSTPVYKLCPKHLKNNKSHAHVTSVKYNYNGSEI
VASYNDEDIYLFDTLFPFSIGDFAHRYQGHRNNATVKGVNFFGPKSEFVISGSDCGNIFI
WEKNTEAIVQWMTGDENGVVNRLEPHPHIPILATSGLDYDVKVWVPSCEKPPVMKDLETC
IKYNMRSRERDMSRDPDAFDGQLLWFLWRHVRESEEPRVRARGSGRGSGDAQDGEDAGTS
SDNTSSHSNSASEDESDERPQCSPS
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgaagacgatgacgaacttatgtgcggaacaggaaaatcaaaaagtcatgaa
actgagttgaatggaatcaataaagtgatagcagagactgttgccaataaaaacgaaaat
aacgcagcacaggcaatatgtactgaaaataaggacgacagggttcacattacagagaag
tcacattattctctgaagacagatgatagtaaggagggcgaaatgtggccgcagccttca
gaaatggttacaaatgacagtcagcaacaggtagaactatctgaggagtcgaatttgatg
aaaagtgggctggattcaaaggatcaaggaacaacaacttctattggcgagtttactcag
tcaaaaagaggaatttcagaaggccaagaggatggtgatagactttcaaataatgaatcg
aagtacagtttggatacagactctagtaaacgtcaaaaaacagatgaaaatgtaaatggg
tcccgagaagctaattctaggaatgaggttccgacacaatttcacaagctgaagtcaaaa
gtcaggaaacgaaactatcgtgtcaaacagaatgtacaggatgaggctcacgatagttcg
gatgatttactcactggtgaatcaactggtgaagagacggaagccattgatggggatgtt
gcccaaagtgaatatgatctaccgtcaactgtgaatgaagagtcaaatttgagttcacat
ctggatattgccgaagacaccaatgatgaatcggaagaaaatagtgaagggcaggaggat
gaccataccggcgatgacaactccaatgaatggacgtcagccagtgagtcgatgagctct
aatgagccagtccacccagttctgtctaaagaaaaaccaaaaccccagtggtttattgtt
cccgaactgatcaaccggcaacttggttgcaacagactgttccagagcagattgtatggc
tcgcttcatactgtagaacgactagaacttatgtataaactaaaggaacacaagggctgt
gtcaatacgttaagttttaaccaaagagggaattatttggctagtggttctgacgatttg
atggtagttatatgggattggccattaggaaagaaacatgaatcgtttaaaactggtcat
acaagtaatgtatttcaggcatcgtggttgcctttgccatctgaacatttgatggtaacg
tgtgcacgtgatggacatgtcagattaacggatctccataaatcatcggtagactattcg
cggcgacttgcagctcaccaaggcccagctacaaaactctcaattcatcccgaaatacca
cacgtaatactttctgttggtgaagatgccaaagtattcgcaattgatatacgtcagaac
aaacctacaacactcttgacagtgaaggaaggccaatcgcaagtcgcgttatacagcatc
aattcgaatccattcaatagtaacgaattttgcctaggtggacgagatcaatatgtgcgt
ttatatgataaacggaaagtttctacacccgtgtacaagctttgcccgaaacatttgaaa
aataacaaaagtcatgcccatgtcacttcagtgaaatacaactataacggatcagaaatc
gtagcatcctataatgatgaagatatatacttgtttgatactcttttcccattttcaatt
ggagattttgctcacagatatcagggccatcgaaataatgcaacggtaaaaggagtgaat
ttctttgggccgaaaagtgaatttgttatctcaggttctgactgtggtaacatttttatt
tgggagaagaatactgaggcaattgtgcagtggatgactggagatgagaatggcgtggtg
aatcggctggaaccacatccgcacattccaattctagctactagtggattagactatgat
gttaaagtgtgggtcccatcatgcgagaaaccaccagttatgaaggatttggaaacgtgc
atcaagtataacatgaggagcagagagcgagacatgtccagggatccagatgcatttgat
ggacagttgctctggtttttatggagacacgttagagaaagtgaagaaccaagagtccgt
gctcgggggtcaggtcgagggtctggtgatgcgcaagacggtgaagatgctggtacatcc
agtgacaatacgtcaagtcacagtaacagcgcatcagaagatgagagtgatgagaggccg
cagtgttctccgtcttaa
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