Neodiprion pinetum (white pine sawfly): 124214001
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Entry
124214001 CDS
T08966
Symbol
Gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npt04131
]
124214001 (Gapvd1)
Membrane trafficking [BR:
npt04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
124214001 (Gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
124214001
NCBI-ProteinID:
XP_046471872
LinkDB
All DBs
Position
3:complement(29336457..29351317)
Genome browser
AA seq
1575 aa
AA seq
DB search
MKNGSFHEPSQELSSCLHMYGLFHVTDFTTMSSVNSVDSLGTLQWDMIELAGHLRQERLF
VSAEQQTLQNLNQKVLYVSSDLAQQAWVTAQQRVNLNRLIVSRPNCTPASCCQRANTLEN
SQFVDAYKHLRHQACSAYGEFLQALRKSPKLLASCLVEGDRLIQESMQSVIQSLSAGLFG
SCLLPEDKILVLQLLRQLMFLQIIPSDNPRRLLRHGTCAFSRFYSVFHESLFSAKLFLTA
ALHSPIMQLLMEDEMFLDIDPEKAPIRFPPAERLKKFGKEGTLEYQSKLQRYRLWTINSL
ERITNRFIISIRENMHCFPTSVCWLVRQMAGLLAKSGNVDPKEVHAMCTDLVFTYFICPA
IVNPEPYGITDAPISYVARFNLMQVGQILQMMSLVKYQNVDSKVIDLYRKFEKDSVSSLL
DGMLEGATDELEDEPAMVDGSKLQGLARSAALFTESELNALITFLQTVAGDHGDNDFILA
SSIDKKQLNELISQLPCGAPSAQKNANHISPETPSKRGGLLGKVGKGRATRATTSSALNT
TTDGGEDANSASGTEDELLDKTPQNVLVIPFVSNLGETVGLLSEQKVLCMEMQDNIEGGT
VRLNLSGDLQNGHNRNDNGNVERIETQEKRTRFSISHDEVLFEGSIGNTSDNLEAVSEAA
SNHSVASSLELETEDQNDNLSDMVSANVSGRGTPNISGRDTPSSQITEGDDGRAVGEVRQ
LDLPPPAIPTKQSRSEIDDKFCKFEIKKLIEGYFLGDETISLVSDTWSTDVLASDSETVE
QVERFPFPPPPESVQPVLPVEPSQTMLDVSETASEAWSTDVLASDSERMTEVDTDDTASV
ARSDDTARSEIEVESRGDAEIEAETPPPLNPHIVGGVGSPGALFRPIRGEPIAQPSLPVP
PSPTASLTPSLWNVTGRGGAKSDYRRRTLEYIDNNANNINDGDDKSGGDDRLVHLMDKLH
IDNGKTNSECSASSSNHTSAAAVAPALLLANHISAPALPNEKLTNGDVKAEELDIEMTTG
GDVVVRLSTASLTSSSSSGSESRTKNTTATSDSPLPAPMVNGGTDTIDGINSTTSKPSLS
TGAIPKSISFDMTAERGDKELLDEEQKNKRGFFGKLKLSLRNRRGKSLRGADDLSRCYDR
EPAGDGVDIGRIRIRRIMSEETNSSSSINNDTSDDILAKYRRKPSATSDTASIESSHSRT
KEAEDERLAIDLNNVELSFAFADAKRKLRMVLSTADLQHIPWSTASARNAWMQKENELVA
FLQLQLAEAINLQDRALIAHLHETLRCVRLFNDDGCRKLFKSLRDDYQKRSPYIAYLIRC
RQGLLSTLAHLDRLGERVKCDRDAVSSHLVSVCVRVFLEKRETSLLRFCDEFKKLTLADE
KQDMVDNFLGSIHMEMDRDPIWQVASEGQLELARMVLERTVMARVYHNALYPNGEGDIHR
DQLLQDHIKKLAKVVTPNHKDLRIPRIYHYECPWPWAQAELAAISAYKTPRDKLQCVFRC
ATTIMNLLSMASERGIPAADDLIPVLVFVVIKTNPPSLLSTIQYVDSFYANRFEGEEQYW
WTQFCSAIEFIKTMD
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatgggtcttttcatgagccgagccaggagctgagctcctgtctccacatgtat
ggactgttccatgttacagatttcaccactatgtcttcagtaaatagtgtcgactccctt
ggaactttgcagtgggacatgatcgaattagctgggcaccttagacaagaacgtttattc
gtcagtgcggagcaacaaactttgcagaacttgaatcagaaagtcttatatgtttcctca
gacttggctcaacaggcctgggtcactgctcaacagagagttaatttaaatcgtttgata
gtatcgaggccaaactgtacacctgcgtcgtgctgtcagcgggctaatactcttgaaaac
tcacagttcgttgatgcttataagcatttgcgtcatcaagcatgttcggcttacggcgaa
tttttacaggccttaagaaaatctccaaaacttttagcatcatgtctagtagaaggggac
agattaatccaagagtctatgcagagcgtcattcagtcgctatctgcggggttatttggt
agctgtttattgccagaagacaaaatactggttctgcagttgctcaggcagttgatgttc
cttcagataattccatctgacaatcctagaagattactcagacatggcacctgtgcattt
tcacgattctactcagttttccacgaaagcttattttcagcaaaattattcctcacggca
gctttgcacagtccaattatgcagttattaatggaagacgaaatgttcttggacattgat
ccagaaaaagccccaatccgatttccacccgctgagcgtctgaaaaaatttgggaaagag
ggaactcttgagtatcaatctaaattgcaacgctacagactttggacaatcaattctctc
gaacgcattaccaacagatttataataagcattagagaaaacatgcattgctttcctacc
agcgtttgctggctggtaagacaaatggcagggcttctagctaaaagtggaaacgttgac
cctaaggaagtacacgcaatgtgcactgaccttgtattcacttactttatttgtccagca
attgtaaatccggaaccatacggaatcactgatgcaccaataagttacgttgctcgattc
aacctgatgcaggttggtcagatattacaaatgatgtccctcgtcaaatatcaaaatgtc
gacagtaaggtgatagatttatatcggaaatttgaaaaagattctgtatcatcgttgctc
gatggtatgctggaaggtgcgacggatgagctagaagatgaaccagccatggttgatggc
tcgaaactgcaaggacttgccagatctgctgctttattcacagaaagtgaactcaacgct
ttaattacattcttacaaaccgtagccggagaccatggggacaatgattttattcttgca
agtagtattgataaaaaacagttgaacgaattaatatcgcagctaccgtgtggcgcgcca
agtgctcaaaaaaatgcaaaccatatttcacctgaaacacccagcaaacggggcggactt
cttggaaaagttgggaaaggacgtgcaacgcgtgcaactacatcatccgcactaaataca
acaacagatggcggtgaagatgctaatagtgcctctggcacggaagatgagctgctagac
aagactccacaaaatgttctggtcataccttttgtctcgaatttaggagaaactgttggt
ttactcagtgagcaaaaggttctttgtatggaaatgcaagataacattgaaggtgggact
gtgagattaaacctctcaggagatttacagaatggacataatcgcaatgataatggtaac
gtggaacggattgaaacacaggagaaacgaactagattttcgatatctcatgacgaagtg
ttgtttgaaggatcaattggcaatacatcagataatctggaagcggtatctgaggctgcc
tctaaccatagtgttgcttcatcacttgaactggaaactgaagatcaaaatgacaacctt
tctgacatggtttcggctaatgtctctggacgtggtacaccaaacatttctggtcgtgat
acaccttcgtcacaaatcacagaaggtgatgacggacgagctgttggggaagtgaggcag
ctagatctacctccaccagctataccaacaaaacagagccgttcagaaattgacgataag
ttttgcaagtttgagatcaagaagctcatcgaaggatactttttaggggatgaaacgatc
tctttggtgtccgatacatggtccactgatgtactcgcatctgacagcgaaacagttgaa
caagttgaacgatttccatttcctccacctcctgaatctgtgcaacccgttctacctgta
gaacccagccagactatgcttgatgtcagtgaaactgcatctgaagcttggagtaccgat
gttctggctagtgactcagaaagaatgactgaagttgacacagatgatacagcaagtgtt
gcgagatccgacgacacagcaagatcagagattgaagtggagagtcgcggtgatgctgag
atcgaggcagaaaccccaccaccgttaaatccacacattgtaggtggtgttggtagtcca
ggtgctctgtttagaccaattcgtggagagccaattgctcagcccagtcttcccgtacct
ccatctccaaccgcttctcttacaccttccttgtggaatgtcactggacgaggaggagct
aaatctgattatcgtcgacggacgctagagtatatagataataatgcaaacaatatcaat
gacggagatgacaagtcaggtggagatgatagactcgtgcatttaatggataaattgcat
atcgataatggaaaaactaatagcgaatgttcagcttcaagtagtaatcacacaagtgca
gctgccgtagcaccagcattattattggccaatcatatatcagcaccagccctcccaaac
gagaagctcacaaatggagatgtcaaagctgaagaattagatatcgaaatgactactggt
ggagacgttgtagtcagactgagtactgcgagtttgacgtcaagcagcagttctggttct
gagtcaagaacaaagaacactaccgcaacatcagattcgcccttaccggcgccaatggtt
aatggtgggactgatacaatcgacggtatcaattcaactacttcaaaacctagcctatct
acaggtgctataccaaaaagtatcagttttgacatgactgctgaacggggggacaaagaa
ttactggatgaagagcaaaaaaataagaggggctttttcgggaaattgaaattatcccta
agaaatcgtagaggaaaatcgttaaggggtgctgatgacctcagtagatgctatgatcga
gaacctgctggtgatggggttgacatcggtagaatcagaatacgcaggataatgtcagag
gaaactaattcgagcagcagtatcaacaatgatacatctgatgatattttagcaaagtac
agacgaaaaccaagtgcaactagtgatacagcatctatagagagtagtcattcaagaacg
aaagaagcagaagacgaaagattagcaatagatctcaacaatgtagaactatcttttgca
tttgcggatgctaaacgcaagttacgcatggtactgagcacagcagatttgcaacatatt
ccttggagtactgcatctgctagaaatgcttggatgcagaaagaaaatgaattggttgct
tttctccaactacagcttgctgaagcaatcaatttgcaagatagagcattaattgcacat
ctccatgaaactttgcgctgtgttaggctttttaatgatgacggttgtagaaaactcttc
aagtctctgagggacgattatcaaaaacggtctccatatattgcatatttgatcagatgt
cgtcagggattgttgtctacactggcccatctggacagattgggtgagcgagtgaagtgc
gaccgtgatgcagtaagtagccatttggtatctgtatgcgtcagagtatttttagagaag
agggaaacatctctattacgtttttgcgatgaattcaaaaaactcactttggctgatgag
aaacaagatatggtggacaatttcttaggatctattcatatggaaatggacagagatcct
atctggcaagttgctagtgaaggtcaactagaactagccagaatggtattggaacgaact
gtaatggctcgagtttaccataatgctctgtatcccaatggggaaggtgatatacatcga
gaccaattacttcaagatcacataaaaaaattagccaaagttgtaacaccaaatcacaaa
gatctacgtattccacgaatctatcattacgaatgtccatggccatgggcacaagcagag
ttagctgctatctcagcatataaaactccgagggataaattgcaatgtgtgtttagatgt
gcgacaactattatgaatttactgtctatggcatccgagagaggcattccagcagcagat
gatctaattcctgtacttgtattcgtcgtcatcaagacaaatccaccatcgttactgtca
acgattcagtatgtggatagtttttatgcaaacagatttgagggtgaagagcaatattgg
tggacccagttctgttctgcgattgaatttatcaagaccatggattaa
DBGET
integrated database retrieval system
