Neodiprion pinetum (white pine sawfly): 124214074
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Entry
124214074 CDS
T08966
Symbol
Ski6
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124214074 (Ski6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npt03019
]
124214074 (Ski6)
Messenger RNA biogenesis [BR:
npt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124214074 (Ski6)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
124214074 (Ski6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
124214074
NCBI-ProteinID:
XP_046472006
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All DBs
Position
3:42660312..42661963
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AA seq
275 aa
AA seq
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MSGQDLVSDQGLRVDGRRANELRQIRVRMGVFGQSDGSAYLEQGNTKVLAAVYGPHQPRG
GGRGGNRSGTGIINCQYSMAVFSFSAGERKKRPRGDRKTQETSLQLRRAIEAIVQVELYP
RSQIDVFVEVLQSDGSDYCAAVNAATLALIDAGIPIKDYSVGCTATIASMGASEEVDSKD
ETGSGTGIVDANHMEECTGATTLTVVALPGAPGSNYESDTDNSGLVVVAQGTGARLHLSR
LEGLRQRALQGCRDTRVILDQAVRFHLTTHDPHFI
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtctggccaagacttagtgtcggaccaaggactaagagtcgatggacgacgagcaaat
gagttgagacagattcgagttcgaatgggtgtcttcgggcagtcggatgggagtgcttac
ctagaacagggcaacacaaaagttttggctgcagtgtacgggccccatcagccaagagga
ggggggcgtggtgggaacagaagtggcacgggaattataaattgccagtacagtatggct
gtgttcagttttagtgccggtgagcgcaagaaacgaccacgcggtgatcgcaagacccaa
gaaacgtctctgcagctacgcagggctatcgaagctattgtacaagtagaactgtaccct
cgctctcaaatcgacgtgtttgtcgaagtccttcagtccgacggcagtgattattgcgca
gcagtaaacgcagcgactctcgctctaatcgacgctggtattcccattaaggattactct
gtaggatgcacagcaacgatagccagcatgggagcttcggaagaagttgacagtaaggat
gaaacaggatctggaacaggaatagttgatgcaaatcatatggaggaatgtacaggagcg
acgacattaactgtcgttgctttaccaggagcccctggctctaattatgagtcagatacc
gacaattccggtttagtagtcgtggcgcaaggaactggtgcacgactccatctctccagg
ctcgaagggctcaggcaacgggcgttgcagggctgtcgggatacaagggtgattcttgat
caagcagttagattccatttaacgacacatgatcctcattttatttag
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