Neodiprion pinetum (white pine sawfly): 124214205
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Entry
124214205 CDS
T08966
Symbol
RpL40
Name
(RefSeq) ubiquitin-ribosomal protein eL40 fusion protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03010
Ribosome
npt04120
Ubiquitin mediated proteolysis
npt04137
Mitophagy - animal
npt04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
124214205 (RpL40)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124214205 (RpL40)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124214205 (RpL40)
04137 Mitophagy - animal
124214205 (RpL40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
npt03011
]
124214205 (RpL40)
04121 Ubiquitin system [BR:
npt04121
]
124214205 (RpL40)
Ribosome [BR:
npt03011
]
Ribosomal proteins
Eukaryotes
Large subunit
124214205 (RpL40)
Archaea
124214205 (RpL40)
Ubiquitin system [BR:
npt04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
124214205 (RpL40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Ubiquitin_5
DUF2604
TBK1_ULD
Plexin_RBD
Dsc3_N
UBL_UBAC1
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
124214205
NCBI-ProteinID:
XP_046472330
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All DBs
Position
3:complement(40908428..40910077)
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGVIEPTLRILAQKYNCDKMICRKCYARLHPRATNCRKKKCGHTNN
IRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtaaagaccctgacgggcaagaccatcacccttgaggtggaggcgtcc
gataccatcgaaaatgtcaaggctaaaatccaggacaaagagggaatccctccagaccag
cagcgactcatctttgccggcaaacaactcgaggatggtcgtactctttcagactacaac
atccagaaggaatctacgcttcacttggtgctgagactccgcggtggtgtcattgaaccc
acgctccgtattcttgcccagaaatacaactgcgacaagatgatctgtcgcaaatgctat
gcacgactccatccccgtgctaccaactgccgcaagaagaagtgtggccacacaaacaac
atccgccccaagaagaagctgaagtag
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integrated database retrieval system
