Neodiprion pinetum (white pine sawfly): 124214270
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Entry
124214270 CDS
T08966
Symbol
Fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03030
DNA replication
npt03410
Base excision repair
npt03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124214270 (Fen1)
03410 Base excision repair
124214270 (Fen1)
03450 Non-homologous end-joining
124214270 (Fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npt03032
]
124214270 (Fen1)
03400 DNA repair and recombination proteins [BR:
npt03400
]
124214270 (Fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npt04147
]
124214270 (Fen1)
DNA replication proteins [BR:
npt03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
124214270 (Fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
124214270 (Fen1)
DNA repair and recombination proteins [BR:
npt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
124214270 (Fen1)
Exosome [BR:
npt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124214270 (Fen1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
HHH_5
EAD7
Motif
Other DBs
NCBI-GeneID:
124214270
NCBI-ProteinID:
XP_046472455
LinkDB
All DBs
Position
3:complement(24953830..24958730)
Genome browser
AA seq
380 aa
AA seq
DB search
MGILGLSKLIADVAPSAVKEKDIKHYFGRKIAIDASMCLYQFLIAVRSEGAQLTSIDGET
TSHLMGIFYRTLRFIEQGIKPVYVFDGKPPNLKGGELAKRAEKRDEAQKALEVAEAAGNT
EDIQKFNRRLVKVTKQHAEDSKQLLKLMGVPYIDAPCEAEAQCTALVKSGKVFATATEDM
DALTFGCNVLLRRMTFSEARKMPIQEIHYDKVLEGLELNKDEFIDLCIMLGCDYTDSIRG
IGPKRAMELIKTHRSLEKILENLDTNKYPVPTDWNYKQARILFQEPEVMDPNNIELKWSD
PDEEGLVNFLCGDKQFNEDRVRNGSKKLLKARGTSTQGRLDSFFKVLPSTTPVKRKADDK
KTPAKKGKPAGRGKFRGKAK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggtattttgggattatctaaattgatcgcagacgtcgcaccgtcggctgtaaaggaa
aaagatataaagcactatttcggtcgtaagattgccattgatgcatcaatgtgtctttat
cagtttctcattgcggtgcgcagcgaaggggcccagcttacatctattgatggcgaaact
acaagtcacttgatgggtatattctacagaacgttgcgctttatagaacagggtataaag
cctgtttatgtatttgatggtaaaccaccaaacttgaaaggtggggaattggcaaaacgt
gcggagaagagagatgaggcgcagaaagccttagaagttgctgaagcagctggaaatact
gaggatattcaaaaattcaacagaaggctagttaaagttacgaagcaacatgccgaagat
tctaaacaactcttaaagctgatgggtgttccatatattgatgctccatgtgaagctgag
gctcagtgtactgctctggttaaatctggaaaagtttttgcgacagcaacagaggatatg
gatgcattgacatttggatgtaatgtactacttcgacgtatgacatttagtgaggccaga
aaaatgcctatacaagagattcattatgataaagtattggaaggtctggaattgaataag
gacgagtttattgatctatgcataatgttgggctgtgattatactgacagcattagaggt
attgggccaaagcgagctatggagctaattaaaacgcacagatctcttgaaaagattttg
gaaaatttagataccaataagtatcctgtaccgactgattggaactataaacaagccaga
atattatttcaagaacccgaagttatggatccaaataatattgagctgaagtggtcagat
ccagatgaggaaggcttggttaattttttgtgtggtgataagcaatttaatgaagataga
gttagaaatggttcgaaaaagttgttgaaagctcgtggtacttcaacccagggtcggctc
gactcgttcttcaaagtgttgcccagtacaactccagtcaagcgtaaggccgatgacaaa
aagacaccagcgaaaaaaggcaaacctgctggaagaggtaaatttcgaggaaaagccaag
taa
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