Neodiprion pinetum (white pine sawfly): 124214579
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Entry
124214579 CDS
T08966
Symbol
brm
Name
(RefSeq) ATP-dependent helicase brm isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124214579 (brm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npt03021
]
124214579 (brm)
03036 Chromosome and associated proteins [BR:
npt03036
]
124214579 (brm)
Transcription machinery [BR:
npt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124214579 (brm)
Chromosome and associated proteins [BR:
npt03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
124214579 (brm)
Chromatin remodeling factors
BAF complex
124214579 (brm)
PBAF complex
124214579 (brm)
GBAF(ncBAF) complex
124214579 (brm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
ResIII
QLQ
DEAD
HDA2-3
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
124214579
NCBI-ProteinID:
XP_046472928
LinkDB
All DBs
Position
3:complement(28247521..28380527)
Genome browser
AA seq
1910 aa
AA seq
DB search
MASPSPQSSPMPPPQAPSPMGPPQQAPSPSNPQGSPMGPPQHHPHSPTQGYQGGPPMPQQ
QQPPPQQQGYPPHPQQMPPNMGPQGPGGPGSGPQQGPATPMGPGGPGQMGPNGPQGGPHM
GQGGPVQMGPGGPGGMGPGGPGLMGPSGPGQMGPGGPGPMGPGGPGGQMGPSGPGGQMGP
GVPSQMGPGGPGPQMGHSAPGQMGPGGPGQMGPGGGPGQHGPGGPGQQMGPAGLGQQMGP
GGPGQQMGPVGPGQQMGPGGPGQQMVSGNPGQQMGPGGPSQQMTPAGPGQQMGPGGPVQQ
IGPGQQMGPSGPGQMGPGGPGQQMGPGQQMGPGGPNQMGPGGPNQMGPGGPNQMGPGGPG
QQMGPSGPQGGPHMGPGGPGQMGPGSGQGAPQGGPHIGQGAPQGGPHIGQGAPQGGPHIG
QGQMGPGGPQGGNQIGPGGPSHMSGPPGSLHMGPTGPGSHIGPGGPGQMTSSSGHSMGPG
GPNQMGPTGPSSIPGGPSPMGPGGQGSQIGQNPPGSMGPSSQGQGQMGPSGPGQMGPTGP
GQMGPSGPVNQLNQTAPGQMGPGGPPVPGSTSGPVQENLNALQRAIDSMEEKGLQEDPRY
SQLLALRARQGNSMGEKQAFSTQQLQQLRVQIMAYRLLARNQPLSQQLALAVQGGAPPPG
IGQRPVDQTQGPVTPGPSPQMAGPPVVGPPGPPRPGPQTPQQQQPQQPGTKTNRVTSIAK
PAGLDPLLILQERENRVAARISLRMEQLSNLPTNMPEDLRLQAQIELRALRVLNFQRQLR
SEIIACTRKDTTLETAVNVKAYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLS
SVLQHGKDFKEFHRNNVAKLARLNKAVLNHHANAEREQKKEQERIEKERMRRLMAEDEEG
YRKLIDQKKDKRLAFLLSQTDEYIGNLTEMVKQHKMEQKRKQVEEQKRKKKKKKLQESEG
GEDGNGNGDRRVSVTETSTGRKLTGEDALPLSQLPAFLESHPGWEVLDSESEEEDSEDEE
NEGKFECKDKYKGDSEDDKVKKTLHKAKVEDDEYKTEEQTYYSIAHTVHEVVTEQASIMV
NGKLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTHLMEKKKVNGPFLIIV
PLSTLSNWVLEFEKWAPSVVVVSYKGSPAGRRAIQSQMRATKFNVLLTTYEYVIKDKGVL
AKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLP
SIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPD
KVEYIIKCDMSGLQKVLYKHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPF
MFQAIEEKYCEHVGIQGSTVTGPDLYRASGKFELLDRILPKLKATDHRVLLFCQMTQLMT
IMEDYLGWRGFMYLRLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADT
VIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQ
AGMFDQKSTGSERQQFLQSILHQDDADDEEENEVPDDETVNQMIARSEGEFEKFQKLDLE
RRREEAKLGPNRKSRLLEEAELPDWLVKDDDEVERWTYEEDEERFLGRGSRQRKEVDYTD
SLTEKEWLKAIDDDGNEFEEEEEDDKKKKKTRKRRKKGEEDEEPIMKKRRGGSSGTSVDP
KLKRSMKKLIAVVVNYTDSTNGRLLSEPFMKLPSRRELPDYYEIIRKPLTINKLRQKIDE
GKYSDFDELEKDFMQLCKNAQIYNEEASLIHEDSIVLQSVFTNARQRIEAEGDNSDGDDK
GDGDDGSDGDSSVKMKIKFKGKKSGENRGGRRKRVTRKYISDDDEDGEDN
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcccctcgccccaatcgtctcccatgccacccccacaagcaccaagtccaatg
ggccctccccaacaagctccatccccgtccaatcctcaaggcagtccaatgggtcctcca
caacatcatcctcatagtccaactcaaggatatcagggcggtccaccaatgccgcagcaa
cagcagcctcccccacagcaacaagggtatcctccacacccgcagcaaatgccaccaaat
atgggacctcagggccctggtggtccaggatcaggaccacaacaaggtccagctacgcca
atgggacctggtggcccaggacaaatgggtccaaatggtccgcagggtggacctcacatg
ggtcaaggcggtcctgtgcaaatgggacctggtgggcccggtgggatgggtccgggaggt
ccgggcttgatgggtccaagtgggcctggtcaaatgggccccggaggcccagggccgatg
ggtcccggaggacctgggggtcagatgggtcctagcggaccgggaggtcaaatgggccct
ggggtaccaagtcaaatgggtcctggaggaccaggtcctcagatgggccatagtgcgcct
ggacaaatgggcccaggaggtccaggtcagatgggtccgggaggagggcctggacagcat
ggacctggaggtccgggacagcaaatgggacctgctggcctaggtcaacagatgggccct
ggggggcctggacaacaaatgggacctgtagggcctggtcaacaaatgggtccaggaggg
ccagggcaacaaatggtttccggaaatcctggtcaacaaatgggaccgggaggccccagt
cagcagatgacccctgcaggccctggccagcaaatgggcccaggcggacctgttcaacag
atagggcctggacaacaaatgggtcccagtgggcctggacaaatgggccctggtggacct
ggacagcaaatgggacctggacaacagatgggaccaggtgggcccaaccaaatgggtcct
ggtggtcctaatcaaatgggccctggtggtcctaatcaaatgggtcctggcggacctgga
cagcaaatgggtccaagtggccctcagggtggaccccatatgggacctggaggtcctgga
cagatgggaccgggaagcggacaaggagcgccacagggtggaccacatataggacaagga
gcgccacagggcggaccacatataggacaaggtgccccacagggtggaccacatatagga
caaggacaaatggggcctggtgggccacaaggaggtaatcaaatcggaccaggtggccct
agtcacatgagtggtcctccagggtcattgcacatgggtcccactggacccggcagtcat
attggtccaggtggaccaggacaaatgacttcaagcagcggacactcgatgggacctgga
ggaccaaatcaaatgggtcctactggtccaagctcaatacccggaggtccgagtcccatg
ggaccaggaggacagggatcacagataggacaaaatcctcctggatcgatgggaccaagc
agtcagggtcaaggccaaatgggcccgagtggaccaggacaaatgggaccgacaggtcct
gggcaaatgggtccaagtggcccagtcaatcagctgaatcagacagcaccaggacagatg
ggacctggagggccccccgttccgggcagtacatcaggacccgtacaagagaacttgaat
gctttacagagggcgattgattccatggaagaaaaaggacttcaagaagatccacgttat
tcgcagctgcttgcgctgagagctcggcagggcaatagtatgggagaaaaacaggctttc
agtactcagcaattgcaacaacttcgcgttcaaattatggcatacagattattagcaagg
aatcaacctttgtctcaacaattagcactcgctgttcaaggcggagctcctcctccaggt
attggccaacgtccagttgatcaaacccaaggtcctgtcacgccgggtcccagcccacaa
atggctggcccacccgttgttggaccccctggtcctccaagacctggaccacaaacacca
cagcaacagcaacctcaacaacctggaaccaagactaacagagttactagcatcgcaaaa
ccagctggacttgatcctctgctgatattgcaagagcgtgagaatagagttgctgcgcgt
atcagtcttcggatggaacaactcagtaatctaccaactaatatgccagaagatcttcgt
cttcaagcacaaattgaattgagagcattgcgtgttctcaacttccagcgtcagcttaga
tctgagataatagcctgtactcgtaaagatactactttggaaacagcggtaaatgttaag
gcctacaaaagaacgaaacggcagggtttgcgggaagctagagctacggaaaagttggaa
aagcaacagaagttagaagccgagcgtaagcgcagacagaaacatcaggaatttttgagc
tctgttctccagcatggcaaggactttaaggaattccatcgcaataatgttgcaaaattg
gcacgtttgaacaaagccgtactgaatcatcatgccaatgccgagcgagagcaaaagaag
gaacaagaacgtatcgaaaaggaacgtatgcgtcgtttgatggctgaggacgaagagggt
tacagaaaattgatcgatcagaaaaaagacaaacgtttggcatttttgctctcgcaaact
gacgaatatattggaaaccttaccgaaatggttaagcaacataaaatggaacaaaaaaga
aaacaagtcgaagaacaaaaacgtaaaaagaagaaaaagaagctccaagaaagtgaaggc
ggtgaagatggtaatgggaacggtgacagacgagtatcagttactgaaacttctactggc
cgtaaattgacgggcgaagacgcactacccttgagtcagctgccagcatttttagaatct
catcctggatgggaagtactagattctgagagcgaagaggaagatagtgaagatgaggaa
aacgagggcaagtttgagtgcaaagataaatataaaggagattccgaggatgataaagtt
aagaaaactcttcataaagctaaagtcgaagacgacgaatacaaaactgaggaacaaact
tactacagtatagcccatactgtacatgaagttgtgactgaacaagcttctatcatggtt
aatggaaagttgaaagaatatcaaattaagggcttggagtggttggtatctttgttcaat
aacaatctaaatggaattttggctgatgagatgggtttgggtaaaactattcagactatc
gctctagtcacgcatcttatggaaaagaaaaaagtcaatggtcctttcttgataattgtt
ccgctctcgacattgtccaattgggtgttggaatttgaaaaatgggcacccagtgtggta
gtggtttcttataaaggttctcctgctggtcgtagggctatacaatcacaaatgagagca
accaagtttaatgttcttttgactacctacgaatatgttatcaaagacaaaggtgttcta
gctaagctgcaatggaagtacatgattattgacgaaggtcacagaatgaagaatcatcat
tgcaaactgacacaagtactgaacactcattaccttgcgccacatcgtttgttgctaact
ggtaccccattgcaaaataaactcccagaattgtgggcattactgaactttttactacca
tcaattttcaagtcttgtagcacatttgaacaatggttcaacgcgccttttgctacgact
ggtgaaaaagtcgaactgaatgaagaagaaactattttgatcattcgtcgtttgcacaaa
gtattgcgtccgttcctgcttcgtcgtctaaagaaggaagttgaatcccagttgccagat
aaagttgaatatattattaagtgcgatatgtcaggtttacagaaggttctttacaaacac
atgcagagcaagggggttctactgacagatggctcagagaaaggaaagcaaggcaagggt
ggcgctaaggctctcatgaatacaattgtgcaattgaggaaactatgcaatcatccattc
atgttccaagccatagaagaaaagtattgcgaacatgtcggaattcaaggatctacagtt
actggaccggatctgtatcgagcgtctggaaagtttgagctgttggatcgcattcttccg
aaattgaaggccacggatcacagagtattgttgttctgtcaaatgacacaattgatgaca
attatggaggattatttgggctggagaggtttcatgtacctgcgtctagatggtactacc
aaggctgaagaccgaggggatctgctaaaaaaatttaatgatcctggatccgaatatttt
ctctttctcttatccaccagagctggaggtcttggtcttaatctgcaggccgcagatact
gtcatcatattcgattctgattggaatccacaccaggatttgcaagctcaagacagagct
catagaattggacaaaagaacgaggttcgcgtgttaaggttaatgaccgtcaactctgtc
gaggaacgaatattggctgctgccaggtacaaattgaacatggacgaaaaagtcattcag
gctggaatgtttgatcagaagtccacagggtcagaacgacaacaatttctccagagtata
ttgcatcaagatgacgccgatgacgaggaggaaaacgaagtgccggatgacgaaaccgtg
aatcaaatgatagcacgttcggaaggagagtttgaaaaattccaaaaactggacttagaa
cgaagaagagaagaagcaaaattagggcccaaccgcaaatcacgtcttttggaagaagca
gagctgcctgactggctggtgaaagacgatgacgaggtagaaaggtggacttatgaagag
gatgaagaaagatttttaggcagaggatctcgtcagcgtaaagaggttgattacactgat
agtttaacagaaaaagaatggttgaaagctatcgatgacgacggtaatgagtttgaagaa
gaagaagaagatgataagaagaaaaagaagacacgcaaacgtaggaaaaaaggcgaagaa
gacgaggaaccgataatgaaaaaacggcgcggtggtagctctggtacatctgttgatccg
aaattgaaacgtagtatgaaaaaattgatcgctgttgttgtcaattacactgacagtaca
aacggccgattattgagcgaaccttttatgaaattaccttcaagacgtgaattacctgat
tactacgaaataattagaaagcctctaacaataaataaactgcggcaaaaaattgatgag
ggaaaatattccgactttgatgaacttgaaaaagacttcatgcagttatgtaaaaatgcc
caaatatataacgaagaggcatcacttattcacgaggattcaatagttttacaatctgtt
tttacaaatgcaagacagagaatagaagctgagggtgacaattccgatggagatgataaa
ggtgatggagatgatggttcagacggcgattcaagcgtaaaaatgaagataaaatttaaa
ggtaagaaaagtggggagaatcgtggggggcgtagaaaaagagtgacgagaaaatatatc
tcggatgatgatgaggatggtgaggataactga
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integrated database retrieval system
