Neodiprion pinetum (white pine sawfly): 124214720
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Entry
124214720 CDS
T08966
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npt03041
]
124214720
Spliceosome [BR:
npt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124214720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
DUF5558
Motif
Other DBs
NCBI-GeneID:
124214720
NCBI-ProteinID:
XP_046473259
EnsemblRapid:
LOC124214720
LinkDB
All DBs
Position
3:19664165..19684402
Genome browser
AA seq
1000 aa
AA seq
DB search
MAQNNYFGFTHGGTQYGATSAAAYQTGQAGYAVTPAATAATYTQRPAAAAATGYETYQAA
AAAAATGTTYAVANAGTVAQTYDYGYGRAAPAPTYDATKTYYQQPAAAPATYTTTETHYQ
AAKPAYSTTSAYTGTARQATTTGQAKTYQASSTAYQQPNPAQNPTYSTGYTAPATPAATA
STPTNKTASTTYSGYDAALYSAATMYVAQQSANSNTNNQKSGGWQGYGRKGFGAGGGAMK
SMRPKQTPKPQQLHYCDVCKISCAGPQTYREHLEGQKHKKKEASLKVPQQPPARGAGNSL
RCELCDVTCTGNDAYAAHIRGAKHQKVVKLHTKLGKPIPSADPTVLNPKPAAVVKATVTK
KATVTATPKINFVASGNLGTVAQPPVTGEVKVEEPVADDTSEDATIDEKDIQPVGQEYIE
ENKSEDGKIISFNCKLCECRFNDPNAKDMHMKGRRHRFAYKKKVNPDLVVDMKPSLKQRK
MLEEKLRRQQMRDEYMRRREEINQLGPIGPMGPMMDEEMLYWEERRRYEDECEYYEWYRR
YGRGPGAPPLPRPFPGPPPMMMFPGPQRRPESSDDKHVLSHHSTIYPKEEELQAVQKIVS
HTEKALKFVSDTLAEGGKKPAPAVAVPAPVATTPATATTPVAKDDAAVKKDGEADKKQPQ
APQKEDGSDGNLFSFQKEKEDSRILRGVMRVGNLAKGLLLSGDNHVCLVVLCAEKPTKTL
LNKVAEILPTQLKTVAPDDTYNVGKHPESAALTVSGGSVTVSVTLTSPLMRETPKVVAPA
ENAGQQQQGAAQPQATPATPAATKPDPPDVLPKAKCLEALAALRHAKWFQARATSLQSCV
MVIRIMRDLCNRVPTWGPLNAWALELLAEKVISTAGGPLSPGEALRRLLECVAGGILLPG
SPVISPGLLDPCEKEPVDAIGNMTAQQREDITSSAQHALRLVAFRQIHKVLGIEQLPPPK
YKGRFARKRRRDNSNCEGTDSEASKKDKKAEEIKMETDAK
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaataattatttcgggtttacacacggtggaacacaatatggtgcaactagc
gctgccgcttatcaaaccggacaggcgggatacgcggtaacaccagcagccacagcagct
acatacactcaacggcccgccgcagcggctgcaacgggatacgaaacttaccaagcagct
gcagctgcggccgcaaccggcacgacttacgccgtagcaaacgcgggaacggtagcgcag
acctacgactacggctacgggcgtgcagcaccagcacctacatacgacgcgaccaaaacc
tactaccaacagcccgcagcagcgcctgcgacttataccacaaccgagacacattaccag
gctgcaaagccggcttacagtaccaccagtgcctacacaggcacggcgcgtcaagccacc
acaacaggacaagccaaaacctatcaggcatccagcactgcttaccaacagccgaatccc
gcacaaaacccaacgtattccactggatacaccgcacctgctacgccagctgccacagca
tccactccaactaacaaaacggcgagtacaacgtattccggctacgacgcggcgctttat
agcgccgcgaccatgtacgtagcccaacagagcgcaaacagcaacacaaataaccaaaag
tctggaggttggcagggttatggcaggaagggatttggcgccggaggcggagcgatgaaa
tcgatgcgtcccaagcaaacccccaagcctcagcagctccactactgcgatgtctgcaag
attagctgtgctgggccacagacgtatagggagcatctggaggggcaaaagcacaagaaa
aaagaagcctctctgaaggtgccgcagcagccacctgcacggggagctgggaactcgctt
cgttgtgaactttgcgacgtcacatgcacagggaacgacgcctacgcagctcacatcagg
ggagcgaagcatcagaaagttgtcaaacttcacaccaaattgggaaagccaattccaagt
gctgatcccaccgttctcaatcctaaaccagctgctgttgtcaaggcaactgttaccaaa
aaagcaacggtcaccgcaacacctaagattaattttgttgcatctggaaaccttggcact
gtggctcaacctccagtaactggggaagtcaaagtagaagagccagttgccgacgacact
agtgaagacgctacaattgacgagaaagatattcaacccgtgggtcaagagtatatagaa
gaaaacaagtctgaagatgggaagatcattagtttcaactgtaaattatgtgaatgccgg
ttcaacgatccaaacgcaaaagacatgcacatgaaagggagacggcacagatttgcatat
aaaaagaaggtgaaccctgatctggttgttgacatgaaaccaagtctaaaacagcgaaaa
atgttggaagagaaactccgtcgacagcaaatgagagacgaatacatgcgtcgtagagaa
gagatcaatcagttgggtcctataggaccaatgggaccgatgatggatgaggaaatgttg
tactgggaagagcgacgccggtacgaagatgagtgcgaatactacgaatggtaccgccgt
tatggacgaggacctggcgctccgccacttcctcggccattcccaggacctcccccaatg
atgatgttcccaggtccgcaaagacgcccagaatcttcagacgacaaacatgtgctgtct
catcattctacgatatatcccaaagaagaggaattacaagctgtccaaaaaatcgtctct
cacacagagaaggcactcaagttcgtttctgacacgctggctgagggtggtaaaaaacca
gcgccagcagttgctgttcctgcgcctgttgcgacgacgcctgctacagcaacaactcca
gtggctaaggatgacgcagctgtaaagaaggatggagaagctgacaaaaaacagccacaa
gccccacagaaagaagatggtagcgatggcaatcttttttcttttcaaaaagagaaagaa
gattccaggattctacgtggagtcatgcgagtcggaaatcttgccaaaggtctcctgcta
tctggagacaatcacgtctgtcttgtggtgttatgcgctgaaaagcctactaaaacactg
ttgaataaggtggcagaaattctacctactcagctgaaaactgtggctcccgatgacacc
tacaatgtcggaaagcatccggaatccgcagctctgacagtttctggtggatctgtgact
gttagtgtgacattgaccagccctctgatgcgggagacaccaaaggttgtcgcaccggcc
gagaatgctggacagcagcaacagggagctgcacaaccgcaagcgacgcccgcgacgccg
gccgcgacgaaaccagacccaccagatgtacttcccaaggctaagtgtttggaggcttta
gctgcactcaggcatgccaagtggtttcaggctagagcaacttcccttcagagctgtgtc
atggttatccgcataatgcgggatctttgcaacagagtacccacctggggacctctcaat
gcatgggcattggaattgctggctgaaaaagtgatcagtaccgctggaggacctctgagc
ccaggagaagcgctgagacgccttttggaatgtgtagctggtggcatactacttccagga
agtccagttatttcaccaggtctgcttgatccatgtgaaaaggagccggtcgacgctata
ggtaacatgacagcacagcaaagagaggacataacatcatcggcacagcacgcactaaga
ttggtcgcatttcgccaaattcacaaagtgcttggaatagagcagctaccacctccaaaa
tacaagggtagatttgcgcgtaagcgcagacgtgacaatagcaattgtgaaggaaccgac
agtgaagcctcgaaaaaggacaagaaagctgaagaaattaaaatggaaacagacgcaaaa
taa
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