Neodiprion pinetum (white pine sawfly): 124214812
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Entry
124214812 CDS
T08966
Symbol
Herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X2
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124214812 (Herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npt04121
]
124214812 (Herc4)
Enzymes [BR:
npt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124214812 (Herc4)
Ubiquitin system [BR:
npt04121
]
Ubiquitin ligases (E3)
HECT type E3
124214812 (Herc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
124214812
NCBI-ProteinID:
XP_046473424
LinkDB
All DBs
Position
3:25033049..25045412
Genome browser
AA seq
1086 aa
AA seq
DB search
MDPCQMASWTKKRRLESESQVIVSTSRLVRTKDMFCWGSTVHGELGLGGIEDENILVPRE
LEFKKSTQVEHIACGENYTVVITRDGQLYSCGNNDHGQLGHEKPRKRLHLIPGLDAFLFK
RAACGASHTMAVNEWGQLFSWGSNADGQLGLNLNNFDERTPRMVKTLGASVVVQIACGLK
HTLALTNNGELYAWGCNKEGQLGIGGESIKELKPKLVTSLASVPMSYIACGGYHSIAVSK
SGAVFSWGRNIYGQLGLNDTRGRGLPSQLRTLRNIKVRYVSCGEDFSIFLTMDGGVFSCG
AGMYGQLGHGNTNSDILPRQVMELMGSTVTQVSCGRRHTLAFVPSRGRVYAWGLGGAGQL
GARVSRSVSTPQVVLGPWVSPNGAAMVQPDISATPHSVDCVVRHVFTGGDHCFATVTHRK
DNIQPDDCRILPPSTQVLTVTEEQLGACQRVPKDASVDHDLLTYLETVFSSQACLNASFL
LDDDAHYGCSSKHHGVDLDKATKLFTTIADLDNNTIKELIFTCLTESLLPTLMPSPPDVE
SLRVYLVLPLYHGFDDPKLCNSLHKPFSKAVSQLKPEALKVISLWWSQAPKDYFERLVRS
YKSVVSHFLQQPKVAENKSVVWDATLQLALDFLRLLNKLNHTTADGLRVPYTSFHLPELS
ECIDVRTDYVKWLTEKHPYAYHKIFFCNYPFLFDAQAKTMLLETDQAIQMRSAMNEAATR
AITQMLFTPFPAGNISAYVTLNVSRENLVNDTLRELSQYNSSDLKKPLKVKFHGEEAEDA
GGVKKEFFMLLLREILDPKYGMFKQYEETRTIWFSEDSLEDEVMYFLIGLLCGLVIYNFI
IIDLPFPLALYKKLLQEPVGLADVKDMSPVLAKSLQDVLDYNEPDLEEVFCLHFEVTREV
FGEQRIYELITNGSNVPVTLENKQEFVDLYVDYLLNKSVDSHFQAFYQGFHKVCGGRVLE
LFHSHELMAVIVGNENYDWDELEKNAVYKNGYTKNDPTIEMFWKVFHELSLEEKKKFLLF
LTGSDRIPIQGMKAIKITIQPMSDDRFLPVAHTCFDLLDLPRYQTRERLRYKLLQAIQQT
QGFSLV
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggatccttgccaaatggcaagttggacaaaaaaacggcgcctggaaagtgaatcgcaa
gtcatagtcagtacgtctagacttgtaagaactaaagatatgttttgctggggtagtact
gtccatggcgaacttggccttggaggtatagaagatgagaatattcttgttccccgtgaa
ttggaattcaaaaagtctactcaagtagaacatattgcttgtggtgagaactacactgtt
gttataactcgagatggtcagctctattcgtgtggtaacaacgatcatggacaacttggt
cacgaaaaaccgaggaaaaggttacacctcataccgggtctggatgcatttttattcaaa
agagctgcctgcggcgcaagtcacacaatggctgttaacgagtggggccaactttttagt
tggggttcgaatgctgatggccagctaggattgaatttgaacaatttcgatgaacgcact
ccacggatggtgaaaactttaggtgcaagcgttgttgtgcaaatagcttgtggactaaag
cacacacttgcactaacaaacaatggagaactttatgcctggggctgcaataaagaagga
cagcttggtattggtggcgaatcaattaaagaattgaaaccaaagctggtcaccagctta
gcttctgtccctatgtcttatatcgcgtgtggtggttaccacagcattgcagtctcaaaa
tctggtgctgttttttcttggggcagaaatatatatggtcagttaggattgaacgacact
cgcggtcggggtctaccttcccaattaagaacgcttcgtaatataaaagtacgatatgtc
agctgtggtgaagacttttctatatttttaacaatggatggtggagttttttcttgcggt
gcaggcatgtatggacaactgggccatggcaatactaatagtgatattttacctcgccaa
gtcatggaacttatgggcagtacagttacacaggtgtcctgcggacgacggcacactctt
gccttcgttccatctagaggtcgcgtttatgcttggggtcttggcggagctggacaattg
ggtgctcgagtttctcgaagtgtttccactccacaggtggtacttggcccctgggtttcg
cctaacggagccgccatggttcaacctgatatctcagctactccacattctgtggattgt
gttgttcgacatgttttcactggcggtgatcattgctttgccactgtaacgcatagaaag
gataacattcaaccagacgactgcagaatattaccaccatcaacacaagtactgacagtt
actgaggaacaattgggagcttgccaaagagtgccaaaagatgcatctgttgatcatgac
cttctcacatatctagagactgtattcagtagtcaggcatgtctaaatgcatcattctta
ctcgatgacgatgctcattatggatgttcaagcaaacatcacggtgtggatcttgataaa
gcgacaaaattgtttacaaccattgctgatcttgacaacaatactatcaaagaactgatc
tttacatgtctgactgaaagtctgttaccaaccctaatgccatcaccccctgatgtcgaa
tcattacgagtatatttggtgctgcctctctaccatggctttgacgaccctaaactttgt
aatagcttacacaaaccgttttctaaagcagtctcacaactaaaacctgaggccttaaaa
gtcataagcttatggtggagtcaggcacccaaggattattttgaaagattagtccggagt
tataaatcagtcgtttcacacttcttgcagcagccaaaagttgcagaaaacaagagtgtg
gtatgggatgcaacacttcagcttgctttggactttttaagattattgaacaaactaaat
cacacaacggctgatggcttacgagtaccgtatacatcgtttcatttaccagagctgtct
gagtgtatcgacgtgagaactgattatgtgaaatggctcacggaaaaacacccgtatgca
taccataaaatatttttctgcaactatccatttctgtttgatgctcaagcaaagacaatg
ttactagaaacagatcaagcaatacagatgcgatcagcaatgaacgaagcagcgactaga
gcaataactcaaatgttatttactccttttcctgctggaaatattagtgcatacgtgaca
ttgaatgtatctcgggaaaatttagttaatgacacactgagagagttgtcccaatataac
tcaagtgatcttaaaaagcccctcaaggtgaaatttcatggcgaagaagccgaagatgct
ggcggtgttaaaaaagaatttttcatgcttctacttagagaaattttagatccaaaatat
ggtatgttcaaacaatacgaggaaacgagaaccatttggttcagtgaagattcccttgag
gacgaagtgatgtattttttgatcggtcttctctgtgggctagtcatttacaattttatt
atcattgatttaccatttccactcgctttgtacaaaaagttgttacaagaacctgttgga
cttgctgatgttaaagacatgtctcctgttctggctaagagtttacaagatgtcctggat
tacaatgaaccagatttagaagaggtattttgtttgcattttgaagtgacgagagaagtt
tttggtgaacaaagaatttatgaattaatcacaaatggtagtaacgttcctgttacatta
gagaacaagcaagagttcgtcgatttatatgtagactacctgctcaacaaatcagtagat
tcgcatttccaagcattttatcaaggatttcacaaagtatgtggaggacgcgttctagaa
ttattccacagccacgaattaatggccgtcattgttggtaatgaaaattacgattgggat
gagctggaaaaaaatgcagtttacaaaaatggctacactaagaatgatcctacaattgaa
atgttctggaaagtttttcatgagctttctttagaagagaagaagaaattcctattattt
ttaacgggtagtgacaggatacccatacaaggcatgaaagctatcaaaataacaattcaa
ccgatgtcagatgaccgatttttgccagtggctcatacgtgttttgatctgttagattta
cctcggtaccaaacgcgagaaagattacgttacaaacttctccaggctatccagcagacc
cagggattctcgttggtctag
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