Neodiprion pinetum (white pine sawfly): 124214829
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Entry
124214829 CDS
T08966
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npt04131
]
124214829
Membrane trafficking [BR:
npt04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124214829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
DUF5050
Vgb_lyase
EGF_3
Motif
Other DBs
NCBI-GeneID:
124214829
NCBI-ProteinID:
XP_046473456
LinkDB
All DBs
Position
1:30716393..30746325
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AA seq
939 aa
AA seq
DB search
MGWSYIRRLTAAASSLLFVLAITASVNLVHGFSTESAGACPLRQYRCDNAKCIPVTWVCD
GDNDCEDNSDERTEECKSTKACTDAEFRCTNGRCILKNWQCDGENDCPDGSDENPSICRI
RRCSEREFECSPGVCITNVWVCDNHEDCADGSDEKNCRRSKNCTAEQFTCRGSIGQCVPL
TWMCDDHPDCMDRSDETDCNNTCRADEFTCDNKHCIQRHWVCDHDDDCGDGSDEKDCQPS
TCQPDTQFTCAKGYCITSRWRCDGDSDCPDGSDEMGCTDRPPKDKMNHCGVHEFSCDDHI
TCIRQSWVCDGGRDCPDGADESPSNCGSVTCRPDQFQCSDRSCISGRFFCDGIKNCPDGA
DEKNCTAADVVCDPLKQFDCGHGSCIPLSSLCDGKPDCLGWEDEPLDLCKKNECLVNNGG
CSQICVDLPIGFRCECRNGYRLINNQTCDDVDECLEPGSCSQFCKNEKGTFKCSCDAGYL
RDPRDLTRCKAAEGHASLLFARRHDIRKVALDRPEMTAIVNNTKMATALDFVFRTGMIFW
SDVSDKKIYKAPIDEGNERTVVIDRDLTTSDGLAVDWIYNHIYWTDAEKNTIELANFEGN
MRKTLIKDRVQEPRAIAVNPLEGWMFWTDWGDDARIERAGMDGSHRSIIVGTEVRWPNGL
TLDLVGKKLYWVDAKLNKIASCNYDGSGRRTVLYSPDILRHPFSITTFEDYIFWTDWDKE
AIFKANKFTGKEVEAITSVRSVQHPMAVHVYHPYRQPDGKNQCQAVNGHCSHLCLPAPKI
SAKSPLLSCACPDGLRLLPDGLMCVENVTTTVAPTTQAVTVPFKRFEPPKVTGSSRPANG
TDGNEGAGFSEENTDRGIVAGIVIGVVTVGLAVPALVAFLCYRHYLHRNVTSMNFDNPVY
RKTTEDQFSLEKNRFPLPATTVGEEAQEPLTSPGTNDYV
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggggtggagctatattcgtaggctcacggcagccgcctcgtccctgctcttcgtcctg
gctataacagcctcggtcaacctcgtccacgggttttccaccgaaagtgcgggcgcatgt
ccgctgcgacaataccgctgcgacaacgcgaaatgcataccagttacgtgggtctgcgat
ggagataacgattgcgaggacaattccgacgaacgtacggaggaatgcaaatctaccaag
gcttgcaccgacgcggagttcagatgtaccaatggccgatgtattctcaaaaactggcaa
tgcgatggcgagaacgactgtcccgatggatccgacgaaaaccccagcatctgccggatt
cgacggtgctccgaaagggagttcgagtgcagtcctggagtctgtataactaatgtctgg
gtctgtgataaccatgaagactgtgctgatgggtcagatgagaaaaattgtcgaagaagc
aagaattgcactgctgaacaattcacgtgtcgcggaagcatcggacagtgtgtaccattg
acctggatgtgcgatgatcacccggattgtatggatcgttcggacgagactgactgcaat
aatacctgccgtgccgatgaattcacctgtgacaacaagcactgtattcagcggcactgg
gtctgtgatcatgacgatgactgtggagacggaagtgatgaaaaagactgccaaccatca
acgtgtcaacctgatacacagttcacctgcgcaaagggttactgcatcacatcacggtgg
cgatgcgatggagattcagattgtcctgatggttctgacgaaatgggatgcacagataga
ccacctaaagacaaaatgaaccattgtggagttcacgaattctcgtgtgatgaccacatc
acttgtatacgtcagagttgggtttgcgatggcggtagagattgtcccgatggcgctgat
gaatctcccagtaattgtggatcagtcacttgcagaccagaccagtttcagtgctcagat
cgaagctgcatttcagggcgtttcttctgtgatggaataaaaaactgtccggatggtgct
gatgaaaaaaactgtacagcggcagacgttgtttgtgacccgttgaaacagttcgattgt
ggtcatggctcgtgtataccactgagcagtttgtgcgacggaaaacctgattgtctggga
tgggaagatgagccgctagatctatgtaaaaaaaatgaatgccttgttaacaacggtggc
tgttcacagatatgtgttgaccttccaattggtttccgctgcgaatgtagaaatggctac
agattaataaacaatcaaacttgtgatgatgtcgacgaatgtctggagcccggaagttgt
tcgcagttctgtaaaaatgaaaagggtacctttaaatgcagttgtgatgctggttatctc
agagatccacgagacttgactcgctgcaaagcagctgaaggccatgcaagtttattattt
gctagacgtcacgacattcgaaaagtagcactcgaccgtccagagatgacagcaattgta
aacaacaccaaaatggccacagctctggatttcgtctttcgaactggtatgatattctgg
agcgatgtcagtgataagaaaatatataaagctcctattgacgagggtaatgaacgaact
gttgtcattgatcgtgatctaaccacatcagatggtcttgctgtagattggatttataat
cacatatactggacggatgctgaaaaaaatacaattgaactggcaaattttgaaggtaac
atgagaaaaactctgataaaagatcgcgtacaagaaccaagagcaattgctgtcaatcca
ctggagggttggatgttctggacagactggggtgacgatgctagaattgaaagagctggg
atggatggctcacaccgttcgatcatcgtaggaaccgaagtgagatggccaaacggctta
acgttggatttagttggaaagaaattatattgggtagatgcaaaattgaacaaaattgct
tcttgcaactacgacggatctgggagacggactgtattatactcgcctgatattctcagg
catccgttcagcattacaacgtttgaagattacattttctggacagattgggataaagaa
gctatttttaaagcaaacaaattcaccggcaaagaagttgaggcgataacttctgtgagg
tctgttcaacacccaatggctgtacacgtgtatcatccgtataggcaacctgatggaaaa
aatcagtgtcaggcagtaaatgggcactgtagtcacctttgcttaccagcaccaaagatc
agtgcaaaatcccctcttctcagttgtgcttgtccagacgggctcaggcttttacccgat
ggtctcatgtgtgtcgagaatgtaacgacaacagtcgcaccaaccacccaagctgtcacg
gtgccattcaagaggtttgaacctcccaaggtcacaggttcaagtagaccagcaaatggc
acagatggcaacgaaggagctggcttttccgaagaaaacacagatcgtggaatagtggct
ggaattgtaataggagtggtaacagttggccttgctgtaccggctcttgtagcctttttg
tgctacaggcattacctacatcgcaatgtcacaagcatgaactttgacaatcccgtgtac
agaaaaacaactgaagatcaatttagtttggaaaaaaaccgtttcccacttcctgctaca
acggttggcgaagaggctcaggaaccattaacaagtcccggaaccaatgattatgtttaa
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