Neodiprion pinetum (white pine sawfly): 124214899
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Entry
124214899 CDS
T08966
Name
(RefSeq) ATP-dependent RNA helicase p62-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124214899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npt03041
]
124214899
03009 Ribosome biogenesis [BR:
npt03009
]
124214899
Enzymes [BR:
npt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124214899
Spliceosome [BR:
npt03041
]
Complex A
U1 snRNP components
U1 related factors
124214899
Complex B
124214899
Ribosome biogenesis [BR:
npt03009
]
Eukaryotic type
Pre-60S particles
Helicases
124214899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
P-loop_SecA
Late_protein_L2
Motif
Other DBs
NCBI-GeneID:
124214899
NCBI-ProteinID:
XP_046473602
EnsemblRapid:
LOC124214899
LinkDB
All DBs
Position
3:22805024..22812367
Genome browser
AA seq
543 aa
AA seq
DB search
MTYGGSSGGYRSSGGRGGSSQRSGYGSSSGGGSGGSSGRFSSRGGGGGSRGGRGGGGGGS
LRKPNWDYENLKPFKKDFYVPHVNVQNRHPREVEAYRADKQITLKGDALPNPIQFFEEGN
FPDYVMTGIRKQGFSEPTAIQAQGWPIAMSGRNMVGIAQTGSGKTLGYILPAIVHINNQQ
PLNRGDGPIALILAPTRELAQQIQTVASDFGSLSYVRNTCIFGGAPKGGQARDLERGVEI
CIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSA
TWPKEVRNLAEEYLTDYTQLNIGSLTLSANHNILQIIDVCQEHEKETKLGSLLQEIGNVN
DDGGKTIIFVETKKKVENITRSIRRYGWPAVCMHGDKSQQERDYVLREFRNKKGSILVAT
DVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRSQSTGTSYAFFTPQNSRQAKDLVN
VLQEANQVINPKLTEMASRGGGGGGYGGRNRWGYGGGRGRENNFSGSHKRFDSGRSNGYG
SYN
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgacttacggaggatcttcaggtggataccgtagtagcggaggccgtgggggaagcagt
cagaggtctggttatggcagcagtagcggcggtggaagtggaggtagtagtgggcgtttc
agcagccgtggaggtggtggcggaagtcgtggaggtcgcggcggcggtggagggggcagt
ttaagaaagccaaactgggactacgaaaacttgaagccattcaagaaagacttttatgtg
ccgcatgtaaatgtgcagaaccgtcacccacgcgaagttgaagcttatagagcagataag
caaatcacactaaaaggcgatgctctgccgaaccccatccaattctttgaggagggtaat
ttcccagattatgtcatgactggaatcaggaaacagggattttccgagccaactgccatc
caagctcagggctggcctattgctatgtctggacgcaatatggtaggcattgctcaaacg
ggatcaggaaaaactcttgggtacattttgcctgctattgttcatatcaacaatcagcag
cccctaaatcgaggcgatggaccaattgcgctgatcctcgcaccaaccagagaacttgcc
cagcaaattcaaactgtcgcaagcgactttgggtctctttcttatgttcgaaacacctgc
atctttggtggggcgcccaagggaggccaggcgagagatctggagcgtggagttgagatc
tgtattgctactccaggtcgattgatcgattttcttgagagaggaactacgaacctgcgc
agatgcacttacttggtattagacgaagctgacagaatgcttgacatgggttttgaacct
cagatcagaaaaatcattgaacagatcagaccagacaggcaggtcctaatgtggtcagcc
acatggccaaaagaagtgcgcaaccttgctgaagaatatctcaccgactacacacagctg
aacatcggatccctcactctatctgctaaccacaatattctacaaataatcgacgtatgt
caggagcatgaaaaggaaaccaaattgggtagcttgttacaagagatcggcaatgtcaac
gacgacggtggaaaaaccatcattttcgtagagactaaaaagaaagtagaaaatatcacc
agaagcattcgccgctatggatggccagcagtttgcatgcatggtgacaaatctcaacaa
gaacgtgattatgttctcagagaattccgaaacaagaaggggtccatactcgtagcaaca
gacgttgctgctcgtggtctagatgttgacgacgttaagtacgtgatcaatttcgactac
ccgtcatcttctgaagactacattcatagaatcggcagaactggacgttctcaaagcaca
ggcaccagctacgccttcttcacaccacaaaacagccgacaggctaaagacttagtcaac
gttctccaagaagccaaccaagtcataaatcccaaactcaccgagatggcttcgcggggt
ggcggcggcggaggctatggaggaagaaatcgttggggctacggaggtggccgtggtaga
gaaaacaatttttctggatcacacaaacgatttgattccggtcgcagtaacggatacgga
agttataattga
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integrated database retrieval system
