Neodiprion pinetum (white pine sawfly): 124215009
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Entry
124215009 CDS
T08966
Symbol
htt
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npt03019
]
124215009 (htt)
04131 Membrane trafficking [BR:
npt04131
]
124215009 (htt)
03029 Mitochondrial biogenesis [BR:
npt03029
]
124215009 (htt)
Messenger RNA biogenesis [BR:
npt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124215009 (htt)
Membrane trafficking [BR:
npt04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
124215009 (htt)
Mitochondrial biogenesis [BR:
npt03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
124215009 (htt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_N-HEAT
Htt_C-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
124215009
NCBI-ProteinID:
XP_046473802
LinkDB
All DBs
Position
3:8394770..8408723
Genome browser
AA seq
2911 aa
AA seq
DB search
MATINGILKAVDTLKNLQLQDTSHDCAARKKEKIAYCTTVADGICSSAARLTPKFSQVLN
VAIETLLMLCDDSESDVRMVADECLNRIIRGAMTDGNIVKVQIVLYCEIKKNGTARTLRT
ALWRFAQLGHMIRPLKGKAYVANLIPCIVAIAQRSEESVIETLANSLPLILKTLGNFTTD
SNVKTLLNAFCQNIPSTQAVFRRTAANMILTTCLNSRNPQAFLLHVLQYMIDTLVPITDD
EDRVTTVIGVFGCLRIIIPHIDETSNLSQPDVPLHSFIQVYELCLHFARWHSDHNVVNAA
LETLAQLLQFPLKELVPILVSCQGITRSRIAMNENTARLSLGPMSGSNVTISGRNLDSTL
NLFDPDIPEIKPTVEKWIVDSENVLPVIQRPHIKQADTNQVIGKKEKSLENYSSLIIGSL
DSEGIEEESDTGSDIGKAERSPDLSLPSLQSKEDEYLDEVSSSVTSLHRTSSGVLYHECD
IGMFTDADVPLKYCCRYLVSSFLLTGIPGQLIPDKIFRVSVKSLALTCIGHILRLYPNLL
LSTIDKTPNSNAEQQYISDILLFANHMDPQIRGNVAMVIGYFLKAVFLQSGDKYRNMEIF
LRSTVPDRMKDNILSLENLTALLLEGLKDESATTCRQTLLALNLCLTELIESANNKYALP
ILKALPLLVKNPYFLVKIKLVEVLSNLPYTTVEYITGGPHFQKNVISVMVELLGDQDQRV
RHATATAIVQIVPLLYYQHPHENTVTRKASKLTERYLSDMISNPLENSSFQTGSNSSFNS
LPKPFDSLCQQDGDEYDERIESVLSRIISLLTQKLVVGSSKYLNYGCCETLSLLSETFLT
TIYPRAWDCLIPKPIVKKTYKRSNSRGDTINEAQPAGGPVAPTSNALISLTVSFLSSSPL
SLDLSTHRHLMILAGNLASGMAVCNLKPNEPVNKSDSEPVKLWGLFKEKQIHQHFEQLLT
HVVRILNTFVHVIDEVHLQHPNTKSALPPLPTAQALSPKRKLISDQKSKDKEEKTSSSKF
GREQMGVFTNFPHYMKLYEILKAANTNYKSTLESEASKMYLSLLNATLQVLSQILEIATI
HEAGRIAEEILHYLQTTVILSPTATVQCVQQLLKCLFGSNLSVRWIDPDYQKNFERINIF
RDDSKGFYTQCFQTPARQMADMIKTIGNNCQSGNDPSSGWIGLIQRKGDRKMSSVFRSLS
RYPDQKASVASFIRLFEPMVIKSLKQYTVTSCVSLQCRVLLLLSQLVQLRVNYCLLDQDQ
IFIGFVLKQFEFIEDGYIQETEELIPKIFNFLVQLSYEKYHSKVIIGIPKIIQLCDGLMA
SGQSPLTHCIPALVPLIEDIFLIRGSSSTVAEQKELETTRDVLVSMLLRLVEYHQVIQLL
AACLTESRYSSDGNGEEKWTRWSRLTIDSILPVLASGKVRLESKEAHIALVKLFSAVSPT
VFRPVDPLLKVLFIQTPMAQDSVLTMERWLGMVNVVLLALISYAKEEAMLARLSDLSLYN
ANFYSGSLYTSKEPMSDPLNVRSASAYDIAPEKVLARFLFKVIGLITSKVYDLVGLINYK
NHDCYLGAANCVGSDNYLIQQFSFFLQLSIHMFESGSHCKVANAAMQMMQGRNVLQEDRL
MLTELNFLMLQLASKCPILTCQWAYLMTLLSYSEMYFWEEILAKQSPNNAVRSTLSRYNP
SAVNSDQTELTSNLCNINGEIVRKGSTILFCDYVCENINDAEPLTWLLVNHIEETISLAR
EPPVKELLAAAVHRNPAASGLLVQAIAARCLDLSKPSFVKRLLQCLEGTHQSQSGALILA
MVPRLLTSKHLALCRLAAKIASRRAEVLLTLNTEDIKTQLPRDDFIEMMNILLSTRLAKK
YGSLVSLLNKLGAQHYDLSPLELEQRRPFNPSSIKGIQLDRNWFYLQTKLRCCHNNRKYS
LLESAELLGNMNYEDSLQIMSSNDFNSKIVKECFKLGIRYTVKKCQELGFSRNGEETDIV
FEENDLYKAAKECLLQHVQNINELVPKQREIFHPVGRDMSTKEAKYAAKLSELMNDNVYW
NTLLTIIPSVTVYIETLPVLVKYGLSEIDTKFEDVLAKFGLLCFEVIHWMIKECQNDKRK
LNPEELESALRCAEAVLKNQNLHKAFGSNHYWVCTASATLTRIVEHFLASNQRLPVVNSC
GLKPALENNETRPYAQACIEMAMLVAWLEKYQGEGTPDNIPLFLFNPIKSLIITVSREPL
VNSFVLTPPLVWKHGWHVVGSGPTKCLVPLLSSESNLLHEVEVLEQFIYRLTLLGWTSRL
QFEETWMALLSLLNITQNEGMSFDELAVSIQATSLAVQAITNLLTQTLLLPCPGNPVNSI
FIHQSRDPQLSVHKINSQKLYLIQETLISKFEYVNESKSMHGLTLDHIFRRGNIERVSNR
HQYSYSQFSLPYLWASCSLHEDKLSSSVLELKKYRNNVLESLSLDLNSCLHFLLELYSSW
TMPRVNTPLRLLNEVTKSILAISELFTERFQYQWMLDTCLDLSRVHPIENEILHQYLVIA
VCKATAVLTPLNGETLEKVKRLVETSLKSGFLPARVFALQGTLYLLQSAVFAGCEETMNI
IHPLAIEYIQKHIDAQDSQGVLSQSEEHQGVMWALVFFLLEHAEDTPPDAEAPAVLELVL
SLVNTQNISTSLHQTLLQGLERLVATRSVVGKVAEQIVKVAVDRLKQASPILALPALQLL
LTCMYTGAAEKLNNPEIEEPLPDEEPEVLVQSIERTSAIFDRIKKGYPMEVEVLCAVLPG
VLGDFFPPWEILTKVIGEFLSPQQPHPRLLSAVVFQVCERACNSAQLGLLQEWVVFSLPN
FIQSLPIAMSTWCLSCFFISASTNPWLRAFFPHVQSRIGKYEYEDKKILCISAADFYQKL
SNTNQKMAFVETFETAAKEPGTPFSDILASL
NT seq
8736 nt
NT seq
+upstream
nt +downstream
nt
atggctacgattaacggaatactcaaagcggtggatacattgaaaaatttgcaacttcaa
gatacttcccacgattgtgccgccagaaaaaaagaaaaaatcgcgtactgcactactgtg
gcagacggcatatgctcttctgccgctagactcactccaaaattttctcaagttcttaac
gtcgctatagagacgctgctaatgctttgtgatgactcggaatcagatgtcagaatggtt
gccgacgaatgcttgaacaggataatacgaggggctatgacagatggcaacatagtgaag
gtacaaatcgtgttatattgcgaaataaaaaagaacggtactgcccgaacattaagaact
gcactatggaggttcgcgcagctggggcacatgatccggccgctgaaaggaaaggcttac
gtggcaaatctgataccttgcattgtagctattgctcagcgttccgaagaatctgttatc
gagacactagccaattctttaccattgattttgaaaactctggggaattttacaacagat
agcaatgtgaagactctactcaatgcattctgtcaaaacataccttcaacacaggctgta
ttccgcagaacagcagctaatatgattcttacgacttgcttgaactctcgaaatcctcag
gctttcttattgcacgttttacagtatatgatagatactcttgtgccaataactgatgac
gaagaccgtgttacaacggtaattggagtatttggctgtctaaggataataatacctcat
attgatgaaacatcaaatttgagccaacctgacgtcccccttcatagctttatacaggtg
tatgagctatgtctacactttgccaggtggcattccgatcacaatgtcgtcaatgcagcg
ttggagaccttggctcaattactacaattccctttaaaagaattggttccgatcttggtt
tcctgtcaagggattacacggagcaggatagcaatgaatgaaaatacagcccgcctttct
ttgggaccgatgagtggttccaatgtaacaatatctggaagaaatttggattcgacatta
aatcttttcgatccagatattcctgaaattaaaccaaccgtagagaaatggattgttgat
tcggagaatgtattaccagtgattcaacgaccccatatcaaacaagccgacaccaatcaa
gtcatagggaaaaaggaaaagtctttggagaattacagcagcctgatcatcggatctctt
gacagtgagggaatcgaggaagagagcgacactggaagtgatattgggaaggcggagcgt
tcgcctgatcttagtttgccgagtttacaatctaaagaagacgagtacttggacgaggta
tcatcgtccgtaacatctttgcatagaacatcgtccggagttctatatcacgaatgtgac
ataggaatgttcactgacgcggacgtaccactaaaatattgttgtcgatacttggtgtcg
tcgtttctgctgactggaattcctggtcaattgatacctgacaaaatatttcgagttagc
gttaaatcacttgctctaacttgcattggtcatattttacgactttatccaaacttactt
ttatcaacaattgataaaacgccgaatagcaatgcagaacaacaatacatcagcgatata
ttactttttgctaatcatatggatcctcaaataagagggaatgttgccatggtaattgga
tattttctgaaagctgttttccttcaatctggtgataaatacagaaatatggaaatattt
ctaaggtcgaccgtacctgatagaatgaaggataatatcttgtcgttagaaaatcttaca
gcgctactattagagggattgaaggacgaatcggctacaacatgcagacaaacactttta
gcattaaatctatgtttgactgaactgatagagtcggcaaataataagtatgctttacca
attctcaaagctctgccactacttgttaaaaatccatattttcttgttaaaatcaagcta
gtcgaggttcttagcaatttgccatacacaaccgtcgagtacataacaggtggtccgcat
tttcaaaaaaatgttatctcggtaatggttgagttattgggggaccaagatcaaagggta
cgtcacgctacagctactgctattgttcagattgttcccttgctgtactatcaacatccg
cacgaaaacacagtgacaaggaaggcgtctaaattaactgaaagatatttatccgatatg
atatcgaacccattagaaaattcatctttccaaacaggaagcaactcatcgttcaacagt
ctgccaaaacctttcgattcgttatgtcaacaggatggagatgaatatgacgaaagaata
gaatccgtactatcgagaataattagtttgcttacgcaaaaactggtcgtaggttcgtca
aagtacttgaactacgggtgttgtgagacgcttagtttactcagtgaaacattcttaacg
acgatttatccaagagcctgggattgtttaattccaaaaccaattgtcaaaaagacatac
aagaggtccaacagccgtggagatacaataaacgaagcacagccagctggaggtcctgtt
gcacccacaagtaatgcattgatatccttaactgtgtcttttttatcttcgtccccgttg
agcctagacctttcaactcacagacatttgatgattttggctgggaacttggcgtcagga
atggctgtgtgcaatttaaagccaaatgaacctgtgaacaaaagtgattccgaaccagtt
aaattgtggggcttgttcaaggagaaacaaattcatcagcatttcgaacagctcttgacg
catgtcgtcagaattctcaatacttttgtacatgtcattgatgaggtacatttgcagcat
ccgaatactaaatctgctctgccacctctgccaactgctcaagcattatctcctaaaagg
aaattgatttccgatcagaaatctaaagataaagaggaaaagacatccagctcgaagttc
ggtcgggaacaaatgggcgtttttaccaattttccacattatatgaaattgtacgagatt
ttaaaggctgctaatacaaattataaatctacattagaatccgaagcaagtaaaatgtat
ctctcactgttgaatgcgacgttacaagtgttatcccaaatcttggaaatagcgactata
catgaagctggcaggatagcggaagaaatattacattatttgcaaacaacggttattttg
tctccaacagcaacggtccaatgtgtacagcagctgctcaaatgtttgtttggaagtaac
ttgagcgttcgatggatagatccagattatcagaaaaatttcgagagaataaacatcttt
agagatgattccaagggtttttatacacaatgctttcaaacaccagcaaggcaaatggca
gatatgattaaaactatcggcaataattgtcaaagtgggaatgatcctagttctggctgg
ataggtctcattcaaagaaaaggggaccgtaaaatgagctcagtattcagaagtttgtca
cggtatcccgatcagaaagcatcggttgcctcatttattcgacttttcgaaccaatggtc
atcaaatcattgaaacaatacacagtcacaagttgcgtatcattacaatgcagagtgttg
ttgttgttaagtcaattggtacaactacgggtgaattactgtttgttggaccaggatcag
atatttattggcttcgttctaaagcagtttgaatttatcgaggacggatacattcaggaa
actgaagaattaataccaaaaatatttaactttcttgttcagctgtcttatgagaaatat
cactccaaggtgataattggcatcccgaagataattcagttatgcgatggactcatggcc
agtggacagtcacctctaactcactgcatcccggctcttgtacctttaattgaagacata
tttcttatcaggggttcaagttcaacggtggcagaacaaaaggaattggaaacaaccaga
gatgttttagtatctatgttgctaagattagtcgagtatcatcaggtaatccaattgcta
gccgcctgtttaacggaatcaagatacagcagcgatggtaacggtgaagaaaagtggaca
cgatggtctaggctgaccatagattcaattctacccgttctagcttctggtaaagtcaga
ctcgagtccaaggaggctcacatcgcactagtcaagcttttctcagctgtgtcgccaaca
gtattcagaccggtcgatccgttgctcaaagtattgttcattcaaacaccaatggcacaa
gattccgttctgactatggaacgctggctgggaatggtaaacgtggttttacttgcttta
atatcatatgccaaagaagaagccatgcttgctcgactctcggatttgagcttgtacaat
gccaacttttattctggttctctgtacacctcaaaggaaccaatgtccgatccgttgaat
gtgagaagtgcgtccgcatacgacattgcgccagagaaagtattagccaggttcctattt
aaagttattggcttgattacatccaaggtgtacgatctagttggtcttatcaattacaaa
aaccacgattgctatctgggtgctgctaattgtgtaggaagcgacaactatttgatacaa
caattttcattctttttacaattgagtattcacatgttcgagtctggtagccactgtaaa
gttgctaatgccgcaatgcaaatgatgcaagggcgaaacgtactccaggaagacaggtta
atgttaaccgaattgaattttctaatgctccaattagcgagcaaatgtcctatactgacg
tgccagtgggcatatctgatgacgcttcttagttacagtgaaatgtacttttgggaagag
attttagccaaacagtcaccaaataatgcggtacgttcaactctcagcaggtacaacccg
agtgctgtgaactccgaccaaacagagctaacgagcaacctgtgcaacattaatggagaa
attgtaaggaaaggcagcaccatactattctgtgactatgtatgtgagaatattaacgat
gccgaaccactaacctggctgttggtaaatcatattgaggaaactatatctctcgctaga
gaacctccagtaaaagaactcctggccgcggcggttcataggaatccggcagcgagtggt
ctccttgttcaggcgatagctgctaggtgcttagatctgtcaaagcctagttttgtaaaa
agattgcttcagtgcttggaaggtacccaccagtctcaaagcggagctctaattttggca
atggtaccaagactactcacttcgaaacatttagcattgtgtagactcgcggcaaaaatt
gctagtcgaagggctgaagttttgctaacattgaatactgaggacattaagacgcagttg
cctagagacgatttcatagagatgatgaacattttgttatcgacgagattggcgaagaaa
tatggtagcctagttagcttgctgaacaaactcggtgctcaacactacgatttgtcaccg
ttggaattagaacagcgtcggcctttcaatccgtcgagcatcaagggtatccagcttgat
aggaactggttttatcttcagactaaacttcgttgttgtcataataatagaaaatacagt
ttactagaatctgctgaactactgggtaatatgaactatgaagactctttgcaaattatg
tcctctaatgattttaattcaaaaatcgtcaaggagtgcttcaagttgggcattagatat
acagttaaaaaatgtcaagagcttggattcagtagaaacggtgaagaaactgatattgtg
ttcgaagaaaacgatctctacaaagcggcaaaggaatgcttactgcaacatgtacagaat
atcaacgaactcgtgcctaaacaacgtgaaatttttcatcccgtaggtcgagacatgagt
actaaggaggctaaatacgcagccaaactttcggagctaatgaacgacaatgtttactgg
aatactttgcttacaattattccatccgttactgtatacattgaaacattaccagtgcta
gtgaaatatggtctgtcagagatcgatacgaaattcgaggatgttttggcaaagttcgga
ctgctctgttttgaagtgatacactggatgattaaggaatgtcaaaatgacaagagaaaa
ttaaacccagaagaattggagtcggcattaaggtgcgctgaggcagtattgaagaatcag
aatctgcataaagcatttggcagtaatcattactgggtttgtactgcgtcagcgactttg
acaaggattgtcgaacattttttggcttctaatcagcgtcttccagtcgtcaacagttgc
ggactaaaaccagcactagaaaataatgaaacaagaccttacgcacaagcctgtatagaa
atggcaatgcttgttgcttggctggaaaaatatcaaggcgagggtactccggataacatt
ccattattcttattcaatccaattaaaagtctgattataactgtgagcagagaaccttta
gtcaattcttttgttctcactcctccgctagtttggaagcatggctggcacgtagtcggc
tcaggtcccaccaaatgtcttgtgccgttgttatcttctgagtcaaatttgttgcacgaa
gtcgaggtacttgaacagtttatttatcgattgacattgttaggatggacctccaggctt
cagtttgaggaaacgtggatggcgttgttgagtttattaaatatcactcaaaatgagggc
atgtcgttcgatgaattagctgtttccattcaagcgactagcttggctgttcaagctata
accaatctgttgacccagacattgcttttgccgtgtcccgggaatccggtaaacagcatt
ttcattcaccagtcaagagatccacagctttctgtgcataaaattaactctcagaaactg
tacttgatacaagaaaccctgatatcaaagtttgagtatgttaatgaatccaaaagtatg
catgggttgactctagatcacatttttcgccgagggaacattgaacgggtttctaacagg
catcaatacagttacagtcagttttctctaccttatttatgggcgtcatgctctctgcac
gaagacaaactcagctctagtgttttggagttaaagaaatatcgtaacaacgttttggag
tctttatctttggacctaaattcttgtctccactttttgctggagctctactcgtcatgg
actatgccacgcgtaaacacacccctgagattattaaacgaagtgaccaaatcaatacta
gctatctcagaattatttacagagagatttcagtatcaatggatgcttgatacttgcttg
gatttgtccagggttcatccaatcgagaatgaaatcttacatcagtatctcgttattgca
gtgtgtaaagctactgctgttctcaccccactaaatggtgaaactcttgaaaaagtgaaa
cgtttggtagagacaagtttaaaatctggtttcctaccagccagagtctttgccttgcaa
ggaaccctttatctcttgcaaagtgctgtatttgccggctgtgaagaaactatgaatatt
atccatccattagccatagagtatattcagaagcacatagatgctcaagattcgcaaggt
gttctcagccagagtgaagagcatcaaggagtaatgtgggctctagtctttttcctgttg
gagcatgccgaagatacgccgccagacgcagaagctccggcagtgctggaactggtgctt
tctctggtcaatactcaaaatatttcaacttctcttcaccaaacgttgttacaaggtttg
gagcgattagttgcaacaaggagtgtagttggtaaagttgcagaacaaatcgtgaaagtt
gcagttgatagactgaaacaggcgagtccgattctggcattacctgctttgcagttactg
ctaacttgtatgtatactggtgcagccgagaagttgaacaatccagagattgaggaacct
ttacccgacgaggagcctgaagtattggtgcagtctatcgaaagaacgtctgcaattttt
gatcgaatcaaaaagggataccctatggaagtcgaggtgttatgtgcagttctaccaggt
gttcttggcgattttttcccaccctgggaaattctcaccaaagtaattggggaattttta
tcacctcaacaacctcatcccagattattatctgctgttgttttccaggtatgtgaaaga
gcttgcaacagcgcacaactgggactactgcaggaatgggtagttttcagcttaccaaac
ttcatacagagtttaccaatcgcaatgtcaacgtggtgtttgtcttgtttctttattagt
gcatcgacaaatccctggctcagagcattctttccacatgtacagtcaagaattggaaag
tacgaatacgaggataaaaaaattctctgcatatcggcagctgatttttaccagaagctc
tcaaacactaatcaaaagatggcattcgttgagacttttgaaacagcggcaaaggaacca
ggcactccattcagtgatattttagcatctctataa
DBGET
integrated database retrieval system
