Neodiprion pinetum (white pine sawfly): 124215071
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Entry
124215071 CDS
T08966
Symbol
Snr1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03082
ATP-dependent chromatin remodeling
npt03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124215071 (Snr1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124215071 (Snr1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
npt01009
]
124215071 (Snr1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npt03021
]
124215071 (Snr1)
03036 Chromosome and associated proteins [BR:
npt03036
]
124215071 (Snr1)
Protein phosphatases and associated proteins [BR:
npt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124215071 (Snr1)
Transcription machinery [BR:
npt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124215071 (Snr1)
SWI/SNF complex
124215071 (Snr1)
Chromosome and associated proteins [BR:
npt03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124215071 (Snr1)
PBAF complex
124215071 (Snr1)
SWI/SNF complex
124215071 (Snr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
124215071
NCBI-ProteinID:
XP_046473936
LinkDB
All DBs
Position
3:complement(36685827..36687890)
Genome browser
AA seq
369 aa
AA seq
DB search
MALRTYGDKPISFQVEENGEYYCIGSEVGNYLRLFRGSLYKRYPGMFRRSITNDERKKLV
ELGLSQHVLASSVSLLRASEVEDIIEGNDDKYKAVSVHSTEPPAPREGKSKKSMSWVPSL
PNSSHLDAVPQATPINRNRVHTKKVRTFPLCFDDTDPSANLENAAQQEMLVPIRLDMEIE
GQKLRDTFTWNKNESLITPEQFAEVLCDDLDLNPLTFVPAIAQAIRQQIEAFPQETILED
QCDQRVIIKLNIHVGNTSLVDQVEWDMSEKENNPEKFAMKLCAELGLGGEFVTAIAYSVR
GQLSWHQRTYAFSEAPLPTVEVPFRPPSEADQWAPFLETLTDAEMEKKIRDQDRNTRRMR
RLANTTPGW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcattacgaacgtatggcgataagcccataagttttcaagttgaagaaaatggagaa
tattattgcatcggttcagaagtcggtaattatttgcgtctctttcgtggttctttgtac
aaaagataccctggcatgttcagaagatctataacaaatgacgaaagaaaaaaacttgtg
gaacttggtcttagtcaacatgttctcgcctccagcgtgtctttgttacgtgccagtgaa
gttgaagacattatagaaggcaatgatgataaatacaaggctgtttcggtccattcaacc
gaaccacctgctcctagggaaggaaaatctaaaaaatctatgtcctgggttccaagttta
ccaaacagctcgcatctcgatgctgtaccgcaagctacgcccattaatcgcaatagagtt
catactaaaaaagtcagaacttttcctctatgcttcgatgatacagatccatctgcaaat
ttagaaaatgctgctcaacaagaaatgcttgtcccaatacgtttggacatggaaattgaa
gggcaaaaacttagagatacttttacatggaacaagaatgaaagccttataacaccagaa
cagtttgcagaagtcttgtgtgacgacttggatctgaatcccttaacatttgtccctgct
atcgcacaagcaattagacaacaaattgaagcattccctcaagagactatcttggaagat
caatgtgatcagagagtcattattaagttaaatatccacgttggaaatacgtcattggta
gatcaagttgaatgggatatgtctgagaaagagaataatccagaaaaatttgcaatgaag
ctttgcgcagagttggggctcggaggagaatttgtcaccgccattgcttatagcgttaga
ggtcagttgtcatggcatcaaagaacatacgcattttctgaagcaccactgccaactgtt
gaagtaccatttagacctccttcagaagccgaccaatgggctcctttccttgagaccttg
actgacgcagaaatggaaaagaagatacgagatcaagacagaaacactcgacgaatgcgg
agattggccaatactacaccagggtggtaa
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integrated database retrieval system
