Neodiprion pinetum (white pine sawfly): 124215086
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Entry
124215086 CDS
T08966
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04136
Autophagy - other
npt04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124215086
04136 Autophagy - other
124215086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npt04131
]
124215086
03029 Mitochondrial biogenesis [BR:
npt03029
]
124215086
Membrane trafficking [BR:
npt04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
124215086
Others
Rab GTPases of specific organelles
Auto phagosome
124215086
Mitochondrial biogenesis [BR:
npt03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
124215086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ATG16
ANAPC4_WD40
eIF2A
NBCH_WD40
DUF4201
HOOK
DUF4407
Cluap1
Cytochrom_D1
Baculo_PEP_C
Fez1
FUSC
Motif
Other DBs
NCBI-GeneID:
124215086
NCBI-ProteinID:
XP_046473999
EnsemblRapid:
LOC124215086
LinkDB
All DBs
Position
3:complement(32324994..32562445)
Genome browser
AA seq
597 aa
AA seq
DB search
MAASNANTHHLPGEDTDWRKNIITQLRDRNRSETYCFHDLICLHNRLLESANTLKLENYQ
LSIANEKLKCEVGSGGFGGNSTLEARLLAHAEELATLHKRRGEHTQQIVDLNNKLQELRK
ELQTKESSIAESLEVNAGLRAEITRCVSRERELENVNQMLKDEHQALQLAFAALEEKLRK
VQEENRQLVERLIRYKAKDAEKMNEENDNFLNEAFTSPTTFLMHTLSKFGKRQAKMQKEL
EDAARDTRGISPDRTSLKECPAGFSPSLPTKVSSKFANAFKAVSNMPNRKHNTRLTNRYQ
RDILIQDAHDGEVNAVKWSPVDRIVATGGADRKVKLWDVSKGSYDSKGMLVGSNAGVMSV
DFDSTGSLILGASNDFASRVWTVSDLRLRHTLTGHCNKVMAAKFLGEPSKVVTGSYDRTL
KIWDLRSRACIETKFAGSSCNDVVISDGSGSTIISGHFDKTIRFWDTRAESSSNNILLQG
KVTSLDLSRDAHYLLSCVRDDTLKLLDLRMNQIIGTFSADGFKVGCDWARATFSPDGQYI
AVGSSNGSVFIWSVSSNKVESVLKDHTSSVTAVAWHPQGTYLASVDRTKQATIWGDV
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttccaatgcaaacactcaccacctgcctggggaggacaccgattggaggaaa
aacattataacccaactgcgagacaggaatagatctgaaacttactgctttcacgatctt
atctgcctacataatcgacttctcgaaagtgccaatacattaaaattggagaactatcaa
ttgtccatagctaatgaaaagctaaaatgtgaggtgggatcaggtggatttggaggtaat
tcaactttggaagctcgacttttggctcatgctgaagaactggccactcttcataaacga
agaggtgaacacactcagcagattgtagatcttaacaacaaacttcaggagttacgaaaa
gaattacaaacaaaagaatctagtattgcagaaagtttagaagtgaatgctgggctgcgc
gcagaaattacaagatgtgtcagcagggagcgagaattggagaatgtaaatcaaatgctg
aaagacgaacatcaagctctgcagcttgctttcgccgctctcgaagaaaaacttcgaaaa
gttcaggaagagaatcgtcagctggtagaacgtctgatcaggtataaggcgaaggatgca
gagaaaatgaatgaagaaaatgacaattttttaaatgaggcttttaccagcccgacaacc
tttttgatgcatacactatcaaaatttggaaaacggcaagctaaaatgcagaaggaatta
gaagacgcagcacgagatactcgtggaatcagtccagatcgaacaagtttgaaggaatgt
cccgctggattttcgccgtcgttacccaccaaagtttcttccaaatttgccaacgctttc
aaagctgtgtcaaatatgccgaataggaaacacaatacgcgtctgacgaatcgctaccaa
agggatattttgatacaggatgctcacgatggcgaagtgaacgcggtgaaatggtcaccc
gtcgaccgaatagtggcgaccggaggtgccgaccggaaagtcaaactctgggacgtatcg
aagggctcgtacgacagtaaaggtatgctggttggcagcaacgcgggcgtcatgtcggtg
gactttgactcaaccggaagtctgattttgggtgcatccaacgatttcgccagccgcgtt
tggacggtcagcgatcttcgactgaggcacaccctcactggccattgcaacaaagttatg
gctgctaaatttcttggcgaaccgtccaaagtcgtcacaggaagctatgacaggactctc
aaaatctgggaccttcgcagcagagcatgtatagagacaaagtttgctggatcaagctgc
aacgacgtggtaatatccgacggctcgggatcgacgataatcagcggacactttgacaag
acgataagattctgggacacgcgagccgagtccagttcaaacaacatcttgctccaaggc
aaagtgacgtcgctggatctatcccgagacgcgcattacttgttgagctgcgtccgtgac
gatacattgaagttgctggatttaaggatgaaccaaattatcggtactttcagtgccgac
ggtttcaaagttggctgcgattgggcacgcgctactttcagtccggacggacagtacatt
gccgttggatcttccaatgggtctgtattcatctggtccgtgagcagcaacaaagtggaa
tcggtgctcaaagaccacacgtcgtcggtgacggcggtcgcgtggcatcctcagggaacg
tacctcgcctccgtagacaggaccaagcaggcgaccatttggggcgacgtgtga
DBGET
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