Neodiprion pinetum (white pine sawfly): 124215132
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Entry
124215132 CDS
T08966
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npt03009
]
124215132
Enzymes [BR:
npt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124215132
Ribosome biogenesis [BR:
npt03009
]
Eukaryotic type
90S particles
Helicases
124215132
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
124215132
NCBI-ProteinID:
XP_046474107
LinkDB
All DBs
Position
1:complement(31905105..31910349)
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AA seq
815 aa
AA seq
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MSNKGTKKKVKIYHKKKYEPEEKIIEKLQAAYKTVDISKVKTFSDLPLSQRTLRGLKVNE
FLEPTEIQRQSIALALRGLDILGAAKTGSGKTLAFLIPILEILYCKQWTRLDAVGALVIT
PTRELAYQIYETLRKVGCYHDFSAGLIIGGKDLHFEKKRMHQCNIVICTPGRLLQHMDEN
PLFDCVNMQVLVLDEADRCLDMGFEQTMNSIIENLPSRRQTLLFSATQTKSVKDLARLSL
HDPMYVSVHEHATHKTPERLQQSYVVCNLEDKMSMLWSFVRNHLRQKILVFFSSCKQVKY
VNDMFCRLKPGVSLLALYGTLHQLKRMAIYEAFCKKQHAVLFATDIAARGLDFPAVNWVV
QMDCPEDVNAYIHRAGRTARFQRGGESLLVLLPSEINMIEQLQEHKVPINVIKINPNKLQ
SPHRKMEALLARDVALKETAQRAFVAYVKSVFLMKDKSIFDVHQLNTDAYAKSLGLAIPP
RIRFLQKINKAKENLRAKKLSKLTDSTNSEISQKLSNYNIESDSDSDKECGNSTSGNEPR
ENSDNEYHAVDSRDRRDTFFGNEDSDSDENILTVKRRDIDIQDGNDSLNDHTEDKYTENI
DNTNTAKKKAVTKAALAKKILKKKIVANKKTTFDDEGQVIVNPTKSKMSERAREYENEES
SGIDIEKAKAILREEDRFDKERFKERIRAKHREEKQKLKASRKKVHEEVEQEGEDAEDEG
DSDGSSDENEPDLSWLPDPDKIYGKREDTDAIQFDNASEDTDEIDRIPKRKLLDNEEING
KKNRKKAKLSDKNVGLSLLEDEELALQLLKNRFIK
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaataaagggacgaaaaaaaaagtcaagatataccataagaaaaaatatgaacct
gaagagaagatcattgaaaaacttcaagctgcctataaaacggtcgatatttctaaagtc
aagactttttccgacctcccactgtcgcagcgaactctaagaggtttgaaagtaaacgag
ttcctcgagccgacggaaattcaacgacaaagcatcgctttagcattgcgtggccttgat
attttgggagcagcaaaaacaggcagcggaaaaactttagcctttttaataccgatttta
gagattttgtactgtaaacaatggacacgattggatgctgttggagccctggttatcacg
ccaaccagggagttggcttatcaaatatacgaaaccttaagaaaagttggctgttaccat
gatttttcggctggtcttattatcggcggtaaagatctgcattttgaaaaaaaacggatg
catcagtgcaacattgtcatctgtacgcctggtagattgttgcaacatatggatgagaat
ccattatttgactgtgtgaatatgcaggtattagttcttgatgaagctgatcgatgttta
gatatgggattcgagcaaacgatgaatagcattattgagaatttgccatctcgacggcaa
acacttttattttcagcaacgcaaactaagtcagtcaaggatttggccagattgagttta
catgatccaatgtatgtatctgttcatgaacatgccacacataagacaccagagcgttta
caacagagttatgttgtctgtaatttggaggataaaatgtcaatgttgtggtcttttgtt
aggaatcatttgcggcaaaaaatacttgtatttttttccagctgcaaacaggtcaaatac
gtgaatgatatgttttgccgtttaaaaccaggagtaagtttgcttgcattgtatggtaca
cttcaccagttgaaacgaatggctatttatgaagcattttgcaaaaaacagcatgctgta
ctttttgctactgatattgccgccagaggattagatttcccggcggtgaattgggtagtg
caaatggattgtccagaagatgtcaatgcttatatacatcgagcaggtagaactgccaga
ttccaaagaggtggagaatccttacttgttttactgccaagtgagatcaatatgattgag
caactgcaggaacataaagttcctattaatgttatcaaaatcaatccgaataaactgcag
tcccctcatagaaagatggaagcattacttgctagagatgtggcgctgaaagagacggct
cagagagcctttgttgcttatgtaaaatccgtctttcttatgaaagacaagagtatattc
gacgtgcatcagctaaatacggatgcctatgccaaatcattgggattggcaataccaccc
aggatacgatttcttcaaaaaatcaataaagcgaaggaaaatctacgtgcgaaaaaactc
agtaaattaaccgattctacaaattccgaaatatcacaaaaactaagtaattataacatc
gaatcagatagtgattccgataaagaatgtggaaatagcacgagtggcaatgagccacgt
gagaatagtgacaatgaatatcatgctgttgattcgcgggatcgaagagacacatttttt
ggcaatgaggatagtgacagtgacgaaaatattctaactgtaaaacggcgagacatagac
atccaagacggcaacgattctctgaacgatcatacggaagataaatatactgaaaacata
gacaatacaaatacagcaaagaagaaagctgtcacaaaagctgcattagctaaaaaaatt
ctgaagaagaaaatagttgcgaataaaaaaactacttttgatgatgagggccaggtgatt
gtaaaccctacaaaatctaaaatgtctgagagagcacgtgaatacgaaaatgaagagagc
tctgggattgatattgaaaaagcaaaggcgatactacgtgaggaggatcgttttgataaa
gaacgattcaaagaaagaataagagcaaaacatcgggaagagaaacagaaactgaaagct
agcagaaagaaggttcatgaggaggtagaacaagaaggagaggatgcagaggatgaagga
gatagtgatggtagtagcgatgagaacgagccagacctgtcctggttgccagatccagat
aaaatttatggcaaacgcgaggataccgatgctattcaatttgataatgccagtgaagat
actgatgaaattgacagaatacccaaaagaaagctgttagataatgaagaaataaacgga
aagaaaaatagaaaaaaggctaaattgagcgataagaatgtcggtcttagtctactcgaa
gatgaagagcttgctttacaacttttgaaaaatcgatttataaagtaa
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