Neodiprion pinetum (white pine sawfly): 124215314
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Entry
124215314 CDS
T08966
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npt03019
]
124215314
Messenger RNA biogenesis [BR:
npt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
124215314
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3730
Motif
Other DBs
NCBI-GeneID:
124215314
NCBI-ProteinID:
XP_046474515
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Position
1:complement(32079271..32084792)
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AA seq
1188 aa
AA seq
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MDEVECKLATNNAILISHAISKIVGLIKDRSDELNGGDVSGVPELATLISKCESSNALIS
VTACHALTTLVENGVLSIGTTLSRFIALLGSTKNYTAVTAAISNLLLLALKIYDDKNPYM
CPFTLKTPQHPLITVLNLNKDIWRDILNQMQFMVNHYEKEIAQNSIELLRPVFLFILCNP
TSTLSESCKQQTWHLLIKTNHAVYLQIEALLWLQTSNANSCINTNYRLLELTELALLNKD
KKLYVALTLLISSLALELVKHGCDPRANLEILSEIFKDNDNEASSVTIALLAELILICPA
VYLNNVIRLCTTIIDTSCSITSMHMLLASLLQWMAYPSLLSCDGLETAKDVINSIKTRKT
WSSHTKRLYANKTFSTLKYFDSNVPFYVETCCCVETLCNENMILWLENISKAPQDFKYKL
KLFLSGIFLQTESSKVAIKVCQILLGIVKENNSFASHLLSLVLYKLTNSQNYNETKALLF
SLPELAIAKENVPLIIHNLETLLGYGKPLKQLAIELYLKTWKNEPRSHRYLQAALVDASK
NDHSWETSITCARAMKYICETRPEHGAELVPLLSQILNRCNDLKGSAPSALALKGISALC
ESGVIDICSTWKILSPKLNKDKRSIVLQSLCELLGDIPSYPRRPSENFDKLVIEVITKLW
SYVAASETTEVVTSALRALSAYNLELIPLKSLPENFRKDLKLPDIYCQTPADAARKPELV
LPYIPGTCWIQMLENINSSALRAAGDLLISFIKSEVNSFRGNIYSPPQGEPNNFRYLPDK
SVIKAIGDYIRLSSVSPKGHREPIIVECLRILSQKYPKPLPPINWVFLQGLLQLNDEAKK
YVIALACHQMTISPSAKRFIENYLTTFEAVTQFQEYVLIYANLQDLCKGVPPNILRPVLE
KTLNYTLEKALMGNDESVDMYKEIMVCYKHTLKDETIHDANRTLLSIILEGLLDRIEGDS
KLFEFYVDTVVELSSKHIERMTSPSVWWEVTGQRLKKAISIRAELTLKKDVELPLAWMNE
VIDTAITMPGEQVFVLRTMLYVQSKMRSESSTSKWVLELMGRIQAILADLLLEDNDQRAI
FLSDVLFISCICLSGNDCLLTNSESIVLSRGLRVSMFSQAIADLVQNEHWRRFVTQIMEW
LHHMRSSILPELYTIAYHNALVSLKHERYFNDAWTKYLSHKPRMHLPL
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagttgaatgtaaattggcaactaataatgccatattaatttcacatgcaatt
tcgaagattgttggactaataaaagaccgcagcgatgaactgaacggtggggatgtgtct
ggggtaccagaattggcaacgttgatttccaaatgcgagagcagtaatgccctgattagc
gtcacggcatgccatgcactcacgactcttgtggagaatggcgtacttagtatcggtacc
acattgtccagattcatagctttgttaggatcaaccaagaattacacggctgttacggcg
gcaataagtaaccttctgttacttgcattaaaaatttacgatgacaaaaatccttatatg
tgccccttcacacttaaaacgccacaacatccattaattactgttttgaatctgaataaa
gatatctggagggacattttgaatcaaatgcagtttatggtaaaccattatgaaaaagag
attgcacaaaacagcatagaactcttacgtccagtatttctcttcattttatgtaaccca
acatcaacactctctgaaagctgtaaacagcaaacttggcatctcttgataaagacgaat
catgcagtttatctgcaaatcgaagcattactctggctgcaaaccagcaatgcaaattct
tgtatcaatacgaactatagacttcttgaactgactgaacttgctttacttaataaggat
aaaaaattgtacgttgctctgactttgctgatatcatctcttgctcttgaattagtcaaa
catggctgtgatccgagagccaatttggaaatactttcagagattttcaaagataatgac
aatgaagccagcagtgttactatagctttattggctgaattgattttaatatgtcctgcc
gtttacttgaataacgttattcggttgtgtacaactataatagatacgtcttgcagtatt
acaagtatgcatatgctgttagcatctttgttacaatggatggcgtatccttcattatta
tcatgcgatggtctggaaactgctaaagatgtgataaattcaattaaaactcggaaaaca
tggtcttcacacaccaaaagactttatgcaaacaaaacatttagtacactgaagtatttc
gattccaatgtaccgttctatgtggaaacatgctgttgcgtagaaactctatgcaatgag
aacatgatcttatggctggagaatatttcgaaagctcctcaagacttcaaatacaaatta
aaactgtttcttagcggtatattcttacaaacagaaagtagcaaagtagcaataaaagta
tgccagattctcttgggtattgtgaaagaaaataattctttcgcatctcacttgctttcc
ttggttttatataagctaactaattcacaaaattacaatgagactaaagcgttgcttttt
tctttacctgaactagcaatagccaaagagaatgtaccattgataattcacaatttggaa
actttactgggatatgggaaaccattgaaacaattggcaatagagctttacttaaaaacg
tggaaaaatgagccacgatctcatcgatatctccaagctgccctagtggatgcaagcaaa
aatgatcattcttgggagacaagtataacttgtgcaagggctatgaaatacatttgcgaa
actcgaccagagcatggagctgaattagttccgttgctgtcacaaatattaaacaggtgt
aacgatctcaagggtagtgccccgagcgctttggctttgaaaggtatatcggcactgtgt
gaatctggagttattgacatatgttcaacatggaagattttatctccgaaactgaataag
gataagagaagcatcgtcttacaaagcctttgcgagttacttggggatataccatcatat
ccgcgtcggccaagtgaaaattttgacaaacttgttattgaagtaataactaagttatgg
agttacgttgccgcttctgaaaccacagaagtagttacatctgctttgcgtgccttatct
gcatacaatttagagctaataccattgaaatcattgccagaaaatttccggaaagattta
aaactgccagatatctactgtcaaacgccagcggatgcggctaggaagcctgaattagtt
ttaccgtatatccctggcacgtgctggatacaaatgttggaaaatattaattcgtcagcc
ttgcgagcagctggggatttgttaatatcttttatcaaatccgaagtcaacagttttcga
gggaatatatattctccgcctcagggagaaccgaataactttcgttacctaccagataaa
agtgttataaaagctatcggcgattacataagactttctagcgtatctcctaaaggtcac
agagagccaataattgtcgaatgtttgagaatactgtcacaaaaatacccaaaaccccta
cctcctataaactgggtgtttttacaaggactcttgcaattaaatgatgaggctaaaaaa
tatgtcatagctttggcttgccaccaaatgacaatatcaccatccgctaaacgatttatt
gaaaactaccttaccacattcgaagcagtcacacaattccaagaatatgtgttaatatat
gcaaacttgcaggatctgtgtaaaggagtaccacccaatattttaagaccagttctagaa
aaaacgttgaattacactttggaaaaagctcttatgggtaatgacgaatcggtagatatg
tacaaagaaatcatggtatgctacaaacatactttaaaagatgaaacaattcatgatgca
aatagaaccttactttccattatattggaagggcttttggatagaatagagggtgatagc
aaactgttcgaattttatgtcgatacagttgttgaattgtcgtcaaagcatatcgaaaga
atgacatcaccgagtgtctggtgggaagttacaggtcagcgtctgaaaaaagcgatttca
attagagcagaattgacgttgaaaaaggatgtagaattaccactcgcctggatgaatgaa
gtgattgacactgccattaccatgcctggggaacaggtatttgttctgagaaccatgtta
tacgttcaatcaaaaatgcgatctgaatcctctacttcaaaatgggtgttagaactgatg
ggacgtattcaagccatattagctgacttattgctggaagataatgatcaaagagctata
tttctctccgatgtattgttcatttcttgcatttgcctctctggcaatgattgcctgttg
acaaacagtgaatcgattgttctgtctagaggccttcgggtcagtatgttctcccaagcc
attgcagacttggttcaaaatgaacactggcgtcgttttgttactcagattatggaatgg
ctgcaccatatgcgatcgagtatattacccgaattatacacaattgcatatcacaatgcc
ttggtctctctcaaacacgaacgatacttcaacgacgcctggactaaatatttatcgcat
aaaccacgaatgcacttaccgttatga
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