Neodiprion pinetum (white pine sawfly): 124215491
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Entry
124215491 CDS
T08966
Symbol
U2af38
Name
(RefSeq) splicing factor U2af 38 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124215491 (U2af38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npt03041
]
124215491 (U2af38)
Spliceosome [BR:
npt03041
]
Complex A
U2 snRNP components
U2 related factors
124215491 (U2af38)
Complex B
124215491 (U2af38)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
124215491
NCBI-ProteinID:
XP_046474885
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All DBs
Position
3:complement(39686128..39689112)
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AA seq
288 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK
SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR
REEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGLSIPVGDGGEIKNESAI
GECTRSGFCNFMHLKPISRELRRYLYSRKKGGKGGGGGGGGGGGGGGGGGGGGGGGGGGG
GRSRSRSKSRGRTDRKRRSRSRERRSRSKDRNRKGRDDKGRDGRSGRY
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatctcgcgtccattttcggtaccgagaaagacaaagtaaactgctccttt
tattttaaaatcggagcttgtcggcacggagataggtgctcacgtatccacaacaaacct
acgttcagccagacatgcctgcttcaaaatctttacgtcaatccgcagaactctgccaag
agcgctgatggttcccatttggtagctaatgtttccgatgaagagatgcaggagcattat
gacaactttttcgaagatgtatttgtcgagtgtgaagataagtatggggaaatagaagag
atgaacgtttgtgataacctcggagaccatcttgttggtaatgtctatatcaagtttcgg
agagaagaagacgcggaaaaagcagtcaatgatttaaacaaccggtggttcggtggaagg
cctgtttatgccgaactatcacccgtgacagatttcagggaagcctgctgcagacagtat
gagatgggattatccattccagtcggtgatggtggagaaatcaagaatgaatctgcaatc
ggagaatgcacccgttctggattttgcaacttcatgcatctgaaaccaatttcaagagag
ctgcgccgttatttgtacagccgcaagaagggcggcaagggtggtggcggaggtggcgga
ggtggaggtggtggtggaggcggaggcggcggcggtggcggcggcggtggtggcggtggt
ggtcgttcaaggtctcgatcaaagtcacgaggccgtaccgatcgcaagcgtagatctcgc
tctcgcgagagaagatccagatctaaggatcgtaaccgcaaaggaagagatgataaaggt
cgcgacggaagatctggtcgctattga
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