Neodiprion pinetum (white pine sawfly): 124215663
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Entry
124215663 CDS
T08966
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124215663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npt04131
]
124215663
Membrane trafficking [BR:
npt04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
124215663
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Nbl1_Borealin_N
Motif
Other DBs
NCBI-GeneID:
124215663
NCBI-ProteinID:
XP_046475281
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Position
3:43610057..43621647
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AA seq
838 aa
AA seq
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MMDWGWQFRSDSNVSLFFSQPMTPTMTGVEEQEKLLEDAVGVVKVQAFQMKHCLDKSRLM
DALKHASTMLGELRTSLLSPKSYYELYMAITDELRHLELYLLDEFQKGRKVADLYELVQY
AGNIVPRLYLLITVGLVYIKTNPCLKRDLLRDLVEMCRGVQHPLRGLFLRNYLLQCTRNV
LPDVAEGVEQEGTVSTRERFPGMLLLQVRDSIDFVLMNFAEMNKLWVRMQHQGHSRDRER
REREREELRILVGTNLVRLSQLETVTLDKYKKLVLPGILEQVVSCRDAIAQEYLMECIIQ
VFPDEFHLQTLNAFLKSCAELQNGVNVKNIIISLIDRLAAFSQRSDGVGGPGSPSQLQGI
PTDVKLFDVFSDQVATIIQTRQDMPPEDIVSLQVALINLAHKCYPDRVDYIDKVLSTTVQ
IFQKLNIERLEYNSAVSRELSRLVKIPVDNYKNILTVLKLEHFAPLLEYFDYEGRKSLAV
YIITNILDNETLIPAQEQVDAVLSMVSPLVQDQPDQPTIEEDPEDFAEEQGLLGRLIHHF
KSETADQQYMILSAARKHFSTGGNKRIKYTLPPIVFQAYQLAFTYKSLKDQDDMWQKKCQ
KIFQFCHVTITALMKAELAELPLRLFLQGAIAIGEIRFDNFETVAYEFMSQAFSIYEDEI
SDSKAQLAAITLIIATFEQMSCFSEENAEPVRNQCALYASKLLKKPDQCRGVSTCSHIFW
SGKSIATGGKEMQDGNKVLDCLKKGIRIASQCMDTSVQVQLFVELLNHYIYFYEKGNAAL
SVQILNQVIAKIREELPNLEVSEETEQIQKHLANTLEHLRNRMESPESEGPSYQGLVL
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgatggactggggatggcagttcagatctgattctaacgtatctctgtttttttcgcag
ccaatgacaccaaccatgactggcgttgaggagcaagaaaaactattggaggatgccgtc
ggtgttgttaaggttcaggcctttcagatgaagcactgcctagataaatccaggctcatg
gatgcactaaaacatgcttcgaccatgctgggagagctccgcacctcgctgctgagtccc
aagagttactatgaactgtacatggcgataactgacgagcttcgacatctggaactttac
ttactagatgagtttcagaaagggagaaaagttgcagatctctatgagcttgttcaatat
gctggaaatattgtacctagattgtatctactcataacggtcggtctagtttatattaag
acaaatccctgcttgaagagagatctactgcgtgatttagtagaaatgtgccgtggagtt
cagcatccattgagagggttgtttttaagaaattatttactacaatgcacacgaaacgtg
ttgcctgacgtagctgagggagttgaacaagagggcacggtgagtacgcgagagcgtttc
ccaggaatgttgctgttgcaggtacgagacagtattgactttgtgttgatgaactttgct
gaaatgaataagctgtgggtcagaatgcagcatcagggtcacagcagagacagggaaaga
agagaaagggaacgcgaagagctacggatcctggtcggaacaaatttagtcagactcagc
cagttagagacggttacccttgacaaatacaagaagttggttttaccaggaatattagaa
caggttgttagctgcagggatgcaatcgcgcaggaatacctcatggaatgcataatccag
gtgtttcctgatgaatttcacttacaaacgctgaatgcgtttctgaaatcatgtgccgag
ctgcaaaatggtgtaaatgtaaagaacatcattatttcattgattgacagactggccgct
ttcagtcagcgatcagatggagtcggtggaccaggaagcccaagtcaacttcaaggaatt
ccaacagatgtgaaattgttcgatgtatttagtgaccaagtggcgacgatcattcagacc
aggcaagacatgccacccgaagacattgtgtcgctccaagtagcgctcatcaatttagcg
cacaagtgttatccagacagagttgattacatcgacaaggttttgtcaaccacggtgcaa
atattccagaagctcaatattgaaagattagaatacaacagtgcagtttcgagggaatta
tccaggctggtgaaaatacctgtcgataactataagaacatactgaccgttttgaaactc
gaacatttcgcaccacttttggaatacttcgattatgaaggaaggaaatcattggctgtt
tacataatcacgaatatcttggataatgaaaccctgatacctgcgcaagaacaagtcgac
gctgtcctgtcaatggtttctcctctggttcaagaccaaccagaccaaccaactattgaa
gaagatcccgaagattttgccgaagaacagggccttcttggtagactgattcatcacttt
aaatcggaaactgctgaccagcaatacatgattttgagtgcagcaagaaaacatttcagc
actggtggaaataagagaatcaagtacactctcccacccatcgtgtttcaagcttatcag
ttggcctttacctacaagagcctgaaagatcaagatgacatgtggcagaaaaagtgtcag
aaaatctttcaattctgtcacgtgacaatcaccgcattgatgaaagccgagcttgccgaa
cttccacttcggctttttctccaaggagccattgctattggtgaaattcgctttgataac
ttcgaaacagtcgcctatgaatttatgagtcaagctttctccatttacgaagatgagatt
agcgattcgaaagcccagttagctgccattacacttataatcgcaactttcgaacaaatg
agttgcttttccgaagagaatgctgaaccagttagaaaccagtgtgcactttacgctagc
aagttactgaagaagccagatcaatgcagaggggtttctacttgttcccacatattctgg
tctggaaagtcaattgccactggtggtaaagagatgcaagacgggaacaaagtactggat
tgcttgaaaaagggaattagaatagcgagccagtgcatggatacgtctgtccaagttcaa
ctttttgttgaattgcttaatcattatatttacttttacgaaaaaggaaatgcagcgttg
agcgtacaaattttgaaccaagtgattgccaagataagggaggaattgccaaacctcgag
gttagcgaagaaacggaacagattcaaaaacatttagcaaatactctagagcaccttcgg
aaccggatggagtctcccgaatcggaaggtccatcgtatcaaggtctcgtactgtaa
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