Neodiprion pinetum (white pine sawfly): 124215928
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Entry
124215928 CDS
T08966
Symbol
RpII15
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
KO
K03017
DNA-directed RNA polymerase II subunit RPB9
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03020
RNA polymerase
npt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124215928 (RpII15)
09124 Replication and repair
03420 Nucleotide excision repair
124215928 (RpII15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npt03021
]
124215928 (RpII15)
03400 DNA repair and recombination proteins [BR:
npt03400
]
124215928 (RpII15)
Transcription machinery [BR:
npt03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
124215928 (RpII15)
DNA repair and recombination proteins [BR:
npt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
124215928 (RpII15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_TFIIS
Zn_ribbon_RPB9
Zn_ribbon_recom
Ogr_Delta
DUF4892
SR1P
RIM2a_ZnF
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
124215928
NCBI-ProteinID:
XP_046475817
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All DBs
Position
4:36032163..36033140
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AA seq
130 aa
AA seq
DB search
MSKITGYDTHDDGPGFVGIRFCQECNNMLYPKEDKENKVLMYACRNCDFKQLADSNCIYV
NKIMHEIDELTHIVADVISDPTLPRTEEHPCPKCNHRESVFFQAQTRRAEEEMRLYYVCT
NQHCSHRWTE
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaataactggatacgacacgcacgacgatggcccaggttttgtgggcattaga
ttttgccaagaatgtaataacatgttgtatcctaaggaggacaaagagaacaaagtgttg
atgtacgcgtgcagaaattgcgacttcaagcagctagccgacagcaactgcatttacgtg
aataaaattatgcacgaaattgacgaactgacccacatcgtcgccgacgttatatcagat
ccgacactgccaagaactgaggagcacccctgtccaaaatgcaatcaccgagaatctgta
ttcttccaagcacaaaccagacgagctgaggaggaaatgagactttattacgtctgtaca
aatcagcactgttcacacagatggacagaataa
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