KEGG   Neodiprion pinetum (white pine sawfly): 124216056
Entry
124216056         CDS       T08966                                 
Symbol
RfC3
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
npt  Neodiprion pinetum (white pine sawfly)
Pathway
npt03030  DNA replication
npt03410  Base excision repair
npt03420  Nucleotide excision repair
npt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:npt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124216056 (RfC3)
   03410 Base excision repair
    124216056 (RfC3)
   03420 Nucleotide excision repair
    124216056 (RfC3)
   03430 Mismatch repair
    124216056 (RfC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:npt03032]
    124216056 (RfC3)
   03036 Chromosome and associated proteins [BR:npt03036]
    124216056 (RfC3)
   03400 DNA repair and recombination proteins [BR:npt03400]
    124216056 (RfC3)
DNA replication proteins [BR:npt03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    124216056 (RfC3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    124216056 (RfC3)
Chromosome and associated proteins [BR:npt03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    124216056 (RfC3)
DNA repair and recombination proteins [BR:npt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     124216056 (RfC3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    124216056 (RfC3)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RuvB_N AAA_22 AAA_11 AAA_14 AAA_assoc_2 ResIII RCF1-5-like_lid AAA_16 DUF815 AAA_24 DEAD AAA_5 AAA_30 AAA_7 TIP49 AAA_19 ATPase_2 Mg_chelatase PhoH BrkDBD AAA_3 Glyco_hydro_57
Other DBs
NCBI-GeneID: 124216056
NCBI-ProteinID: XP_046476082
LinkDB
Position
4:complement(2978363..2981428)
AA seq 328 aa
MTQETPAVANLPWVEKYRPTKLEELISHEEIIKTINKFIKEDQLPHLLFYGPPGTGKTST
ILASAKQLYTPAQFTSMVLELNASDDRGIGIVRGQILNFASTRTIFKHGFKLIILDEADA
MTNDAQNALRRIIEKYTENVRFCVICNYLSKIIPAVQSRCTKFRFGPLAPEQIMPRLEYV
IDKENLTVEEDGKKALMTLSGGDMRKVLNVLQSTWLAYGSVTEETVYSCVGHPLPKDITS
IANWLLNENYVLAYCKIQDLKIKKGLALQDILTELHSFVNKIEFPDGILINLVVKMADIE
RRVATGCTEAVQLNALVAAFQCAREIQC
NT seq 987 nt   +upstreamnt  +downstreamnt
atgacgcaggaaacaccagcagttgctaatcttccatgggtcgaaaagtatcggccaaca
aaattagaagaacttatatcgcatgaggagataataaaaacaatcaacaaatttatcaaa
gaggaccagttacctcatcttttgttttatggaccaccaggaacagggaaaactagtacc
atactagcatcagccaaacagctctatactccggctcaatttacttcgatggtattggaa
ctgaacgcttccgacgacagaggaatcggtatagttagaggacaaattctgaactttgcc
agcacgcgaacaattttcaaacacggatttaaattaattattcttgatgaggcggatgcc
atgacaaacgacgctcaaaatgctcttcgcagaatcattgaaaagtatacagagaacgtc
cgattttgcgtgatctgtaactatctaagcaagattattccagcagtgcaatcgcgttgc
actaaatttagatttggtcctctggcacccgaacaaataatgcctcgtcttgagtacgtg
attgataaggaaaacctaacagtggaagaagacggaaaaaaggcgttgatgacgttaagc
ggaggagacatgaggaaagtcttgaacgtactccaaagtacatggcttgcttatggatcg
gtaactgaggaaacggtttactcttgcgtcggacatcctcttcccaaggacataacgagc
atcgccaattggctactgaatgaaaactacgtactcgcctattgcaaaatccaggacttg
aaaatcaagaaaggattagctttgcaagatattttaacagagcttcattcctttgtaaat
aaaatcgagtttcccgatggtatactcatcaatttggtggtgaaaatggctgatatagag
cgaagagtcgcgactggatgcactgaggctgtgcaattgaatgctcttgttgcagcattt
caatgtgctcgagaaatacagtgttaa

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