Neodiprion pinetum (white pine sawfly): 124216081
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Entry
124216081 CDS
T08966
Symbol
swm
Name
(RefSeq) RNA-binding protein 26 isoform X1
KO
K13192
RNA-binding protein 26
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
npt01009
]
124216081 (swm)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npt03019
]
124216081 (swm)
03041 Spliceosome [BR:
npt03041
]
124216081 (swm)
Protein phosphatases and associated proteins [BR:
npt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124216081 (swm)
Messenger RNA biogenesis [BR:
npt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
124216081 (swm)
Spliceosome [BR:
npt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124216081 (swm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup35_RRM_2
RRM_Nup35
PWI
RRM_1
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
124216081
NCBI-ProteinID:
XP_046476140
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All DBs
Position
4:33002426..33012507
Genome browser
AA seq
1018 aa
AA seq
DB search
MIIENPDQFKAWLTAVLEPLCDADPAALAKYVYALVKKDKTLEELRGGMVEQLDVFLQQE
TKNFVELLFKTLETQEYVLPPPKGAPEGGGTPPSINPPPPVEKQVEIIIPPPPPTGSPPQ
PAQVNGATPAIVIKRETRKSDSEKDVQEKEKRSRSRSGRIRSRTRSRSRSWERDRRRSRS
REHIRRDRERDRSRPWRNKSPPPNTRRHDRRRTRSRSTSPLRSRIRDGPDTRDHRARFRN
RSPTPLRSRSRSRSTDRKKVDRSERNEAARVERGDGSPGGGTPTQDSNHGDVDMRLSTTS
QSIQSVVAVGANPPNSQSGTLQPKRRCRDFDEKGYCMRGDLCPYDHGTDPVVLEDVALSR
VLNFGPHGPQAPGTVPVSSVPEPPPGPNGNAPPPHLPLASLPPPHLRNQHHSNMVAFAEY
NPDAPSMEPRMPWGRHPPPGPGIYGRGQRELISVPVIPHSNPSEMPHTPNNPLKRKQAFD
FNRLGPKQRVVHNPANCSLELKKVPRSLNNITQLNNHFSRFGKIVNIQVNFGGDPEAALV
TFQIPSEAKAAYRSTEAVLNNRFIKVFWHNNVNNNSTSGAIENVPPGEKNGSRPSVKERL
GATINQPIKTEENEYVPTRRATEEPVTPTVIPVSPKAPPIPSREDKVLAIKKSQEMLAAK
ETLKKKQEEKRKEAIKLTADLRKRKQELLDKQLVEIRSLIERAEKNPDQKDAIMVTIKTM
QQSIDSLRKDLATNGQVGANKSQIKTREQTQKEILDAELDLMTAQQEGQDPGELQKRLNE
LKAQAAALGLNAGLGVGRGARPTKVTRGSHVLSYRGRGRGSFAHVSVDHRPTSLLISGYE
SEEKEEVLAHFQQYGEIVNQMVDDATPSIVINFKSRKEAEVALVKGRTFQDRLLSVTWVT
GHHLHRGGGGNANSNIPQPARSEQAPATADEELELEVRTLSNLNISDDNYNMGSRELQKL
YFWRKTKRRKTRMESLAVGDDSSVNVLCDAMSILAIVTVGLYGRISVVYHSHDHWTEF
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgatcatagagaaccctgatcagtttaaggcgtggctcactgctgtcctggagccgcta
tgcgatgcagatcctgctgccctggcaaagtatgtctatgctctagtcaagaaagacaaa
acactggaagagttgcgtggcggcatggttgaacagttggatgtatttttacaacaagaa
acaaagaatttcgttgaacttttattcaaaaccttggagacacaagagtacgtattacct
cccccaaaaggagcacctgagggtggtggaacaccacctagtataaacccaccacctcct
gttgaaaagcaagtcgagattattattcccccgcctccacctactggtagccctccacaa
ccggctcaagtgaatggagctacccctgcaatagtaattaaaagagaaactagaaaatct
gactctgagaaagatgtacaagaaaaagagaagcgatcgcgaagcagaagcggaaggata
agatcaagaactagatcgcggtcacggtcctgggaacgagaccgaaggcgatctaggagc
cgagaacacatccgccgagacagagagcgtgacagaagccgtccttggagaaacaaatca
ccacctcctaacaccaggaggcacgataggaggcgcacaagaagccgcagtacatcacca
ttacgttcacgtattcgcgatggtcctgacactcgtgatcatagagctcggttccgaaac
agatctcctacacctcttagatctcgatctagatcacggtctacagatcgtaagaaagtc
gatagatctgaaagaaatgaagctgcgcgagtagagagaggggatggaagtcctggtggt
ggaactccgacacaagacagtaatcacggagatgtagacatgagactttctaccaccagt
caatctatccaaagtgttgtagctgtaggtgctaatccaccaaatagtcaatctggtact
cttcaacccaagagacggtgtagagatttcgatgagaagggatactgcatgagaggagat
ctctgtccgtatgatcatggtactgacccagtagttttggaggacgttgctttgagtcgt
gtattaaattttgggcctcacggacctcaagccccaggcacggtacctgtttcctctgta
cctgaacctcctccaggaccaaatggcaatgctccacctccccacttaccgcttgccagt
ctaccgccaccgcatctgcgaaatcagcatcattctaatatggttgcatttgcagaatat
aatccagatgctccaagtatggaaccccgcatgccatggggtcgacatccgccgccaggt
ccaggaatatatggccgtggacagcgtgaacttatcagtgtacctgtcataccgcattca
aatccgagtgagatgccacatacaccaaataatccattaaagcgtaagcaggcgtttgac
ttcaatcgccttggaccgaaacaacgagttgtacataatccagctaattgttctcttgaa
ttgaaaaaagttccacgcagtttgaataacattactcagttaaataatcacttttcacgt
ttcggaaaaattgttaatatacaagtaaatttcggtggtgaccctgaggcggcattagtc
accttccagataccatctgaagcaaaagctgcctatcgaagtacagaagcagttttgaat
aatagatttatcaaggtcttttggcacaacaatgttaacaataattcaactagtggagcc
attgaaaacgtacctccaggtgagaaaaacggaagtcgtccatctgttaaagagaggcta
ggcgctacaattaaccaaccgataaaaactgaagaaaatgaatatgttcccactcgtcgt
gcaacagaagagccagtgacgccaactgtgatacctgtgtcaccaaaagcacctcccata
ccatctagagaagacaaagtattggctataaaaaaatctcaagaaatgttagcggccaag
gaaacgttaaaaaagaaacaggaggaaaaacggaaggaagctataaaactgactgcagat
ctgcgcaagagaaagcaggaattacttgataaacaacttgttgaaattcgatctttaata
gaacgagctgagaagaatccagaccaaaaagatgcaattatggtaacgatcaaaactatg
cagcaatccattgacagcttacggaaagatttggccaccaatggtcaagtgggagcgaat
aagtctcaaataaaaaccagggaacaaactcaaaaagaaatattagatgctgaattggat
ctaatgactgctcaacaagagggtcaggatccaggtgaattacaaaagagattaaatgag
ttgaaagcacaggctgcagcattagggttgaatgcaggacttggtgtgggaagaggcgct
aggccaacgaaggtgacacgaggaagtcacgttttatcttatcgggggagaggacgaggt
agttttgctcatgtttctgtcgaccatagaccaacaagcctcctcatttctggatatgaa
agtgaggagaaggaggaagttttagcgcattttcaacaatatggtgaaatagttaatcaa
atggtggatgatgctacaccttccatcgtcatcaatttcaaatcaagaaaagaggcagaa
gtagcactggtaaagggacgcacgtttcaggacagattattgtctgtgacctgggtaacc
ggacaccacctacatcgcggaggtggaggaaatgccaatagcaatataccccaaccagct
cgttcagaacaagccccagcaacagcagatgaggaacttgaattagaagtgcgtactttg
tcgaatctgaacatttccgatgacaattataatatgggttccagggagctgcagaagctt
tacttctggaggaaaacgaagaggaggaagacgaggatggagagcctcgcagttggagac
gatagcagcgtcaatgtcctctgtgacgcgatgtccatactagctatagtcacagtgggg
ctatatggaagaatcagtgtcgtttaccactcgcacgatcactggacagagttttga
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