Neodiprion pinetum (white pine sawfly): 124216099
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Entry
124216099 CDS
T08966
Symbol
DNApol-theta
Name
(RefSeq) DNA polymerase theta
Organism
npt
Neodiprion pinetum (white pine sawfly)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
POLQ_helical
DEAD
HTH_61
Helicase_C
ResIII
Helicase_dom4_arc
IstB_IS21
nSTAND3
SWIRM-assoc_1
Motif
Other DBs
NCBI-GeneID:
124216099
NCBI-ProteinID:
XP_046476185
LinkDB
All DBs
Position
1:complement(5165330..5177171)
Genome browser
AA seq
2402 aa
AA seq
DB search
MSGTTIGSFGEQTLDALLEAECCSNTKNNTVNKKEADNLRNCKPFFIRLQEIKENLTDSR
LKNNHPPCKNYSAKLVTNDDTNIEKYFQESILLSKADTSGLPSKIICGNDNVKSKKNNEI
DLIEDASGNNKFLYNQKGQSSRKESVGVSLSKQDLVKLSEEFLIVESSADKRSNNNSRAV
TNVRGLRKKCISNNTALNDVNFIHSSSNDKIVNNNLVNMVNKKTQDVQIEKRTQSGQLND
LLQVCAQPVNNDLNSIPESVSEYSIVNTQYRCKLSAWGLPPDILQKYELRGMTKMFPWQV
ECLSNYRVLEENKNLVYSAPTSAGKTFVAEMLVIKTVLERQKKVIFILPFVSVVREKMFY
FQDLLSSSGIRVEGFMGGIAPAGGLAAAHIAIATIEKANSLINRLMEEGDLSSLGAVVVD
ELHLLGDPHRGYLLELLLTKLKYMTLREEHVKIQLIGMSATLPNLSVLAEWLDAELFSTE
FRPVPLNEQYKVRTTIYDNKFVPVRELDPSPELPNDSDNILQLCIETISNGHSTLIFCPT
KNWCEKLAHQVAAIFFKLGSEETTLGKILRNQLDSNAIEETLSQLKRCPAGLDDILKSTV
SFGVAFHHAGLTMDERDIIEGSFRTGSLRVLIATSTLSSGVNLPARRVIIRSLMFHGKVI
DTLTYRQMIGRAGRMGKDTAGESILICKPNEKKAAESLLSAPLDPVESCLEGSGPLIRAL
LEAVASEVACTPVDINLYGRCMLASFNPENNVGTHTKEAMDYLTTHEFITVQETKEKEQR
WVATALGKACLASSVSPGEGLFLFEELQRARKCFVLETELHIIYLVTPFNSGSLTGQIDW
MIFFNLWKSLSECERRVGQMVGIEERFVMSAIRGIAKHGKQQNIHRRFFTALALHDLVRE
MPLTTVSEKYGCSRGVLQSLQQSASTFAGMVTQFCKQLGWDCMELLFCQFQARLQFGVCR
ELLDLLRLPMLNGLRARSLYKEGIKCVADLATADELCVERALHKALPFESEKEQDGEHVL
DAAKRNKVRSIFVTGRDGLTPYQAAVLLVQEARTLVQHELGVTEVHWKQDNVTSRNKLGT
ILDDKSNASAIQDHDINQINNQIAMNIPAPIRTASSIAKDATSQDCTENSKTIKDVWKSD
NDSVDAIQQTQNCETGNVVSTVISELHSHRIEYREIKMDGSKITHHIRNEEIDLRNKLQG
ETMQTELNNHKITRGEKHVNEIVKNKPKFSLLGAKRKIRAKDSVTSISSDNFQQIISETA
TFGSPKSLKTPDNERSKSKILNNGPDDTKTNITERNLQENCENICNKISEKSSPAKMVLP
DFKLSISPVVTLKWLSFNEKMSSKQSSEELRKSLRPESFSEQGKKDLRLNDEKKVSLSRS
PSLFGDSLYLDSQFCNELEKNVYGSLDITKVKGTECSAIDSPSISLQKPIAAIETKGKTP
EIIMKQTSSSGVKFSSNTNAMQNRAVTENPDLNNHIFNSEEINFSWNSTTWDHLKESNNA
SNLDSGKKKLNLQMTSNDFDISDEIAATPMMQNTRLKSISLKSNIQNVRNVKLIDNSGTR
KRKFNETHSLSDSSPVLNVLNLSHNRRLSFGSNKSDSDDLIAASQNLESIKNTTKSRTRI
KLESSKRIMINKKQHNSTLTKCNGQSNAIKTKNIELIRTGNASAKKVLYQENCSTDSVVS
NSEEDSPIQRMRATQNLHKRTVNSSFIVQKIENLQKCKKRCLRSDVREEQLNSEQTVNWN
VLDIINVTLNDNIFKLFSNELKQKTEIAIALAHNKFVNDTIGIGSKLVSGSASRMKNKFK
KNESCVYLDTVVNGVAISWGRNVIYWISFENRKEGSITLKDRLQLLRDVFTDSSVNVRCY
GSKEVYKKLHQCCKITPNCRFLDPKVAEWLLQPETDESNICDMAKMYFPQGATILQHASS
LKSSAGTSSGNDDYFFDRHKAAAVATVTWHVTSKLIEELHKQSQTLLNTFEDVETKVVST
LARMELTGIGLNLESLQELSAVLQEEMSSLEQRAYSLAGRKFSFTSSKEVAQVLGMYKGV
KVSTNKAVLENCDNPISKQIMSWRKLNTTQTKMVFPLLNLAQQGPRVRGCCLTRTATGRI
SMHEPNLQNVPRDFNSENNSYVISMRMAFVPTCGNIMLSADYCQLELRILAHLSKDPVLC
EIMKKDSDIFKNIAAQWNYITINEVDDDMRQRTKQLCYGIIYGMGSRALAKQLSVTELEA
SRFMESFMGTYPNVNNWLNQVITESRENGYVTTLMERRRLLPSLNSEIKSERSQAERQAV
NTKIQGSAADLAKKAMVLIDERLQKEYSDTSRVISEMKTRKLRSSKDSQNRGAYLVLQLH
DELLYEVNAADLDRVAAIVKISMEEAYQLTIPLPVKIRVGPTWGSLTEYTVQKPIESSEC
IF
NT seq
7209 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaacgacaataggctcatttggggagcagaccttggatgcattattagaagcc
gaatgttgcagcaatacaaagaataataccgtaaataagaaagaagcggataatttacgc
aactgtaaaccattttttattcgtcttcaagaaataaaagagaatttgactgatagtcgt
ttgaaaaacaatcatccgccttgcaaaaactactctgcaaaattggtgacgaatgatgat
accaatattgagaaatattttcaagaaagtatacttttatctaaagctgacacttcaggt
ttaccaagtaaaataatttgtggaaacgataatgttaagtcaaagaaaaataatgaaatt
gatttgattgaagacgcgagtggtaataataaatttttatacaaccagaaaggtcaaagt
tccagaaaagaatctgttggagtatctttatccaaacaagatcttgtcaagttatctgaa
gaatttctcatagtcgaaagttcagctgacaagaggtcaaacaataattcacgtgcagtt
accaacgtgagaggcttgcggaaaaaatgtatctcaaataacacagcattgaatgacgtt
aattttatacattcatcatccaatgacaaaattgtaaataataatctagtaaacatggtc
aacaagaagacccaagatgtgcagattgaaaaaagaactcaaagtgggcaactcaatgac
ctgttacaagtgtgtgcacaaccagtaaataatgatttaaattcgatacctgagtcagtc
agcgaatactccatagttaacacacagtatcgttgcaaattatctgcatggggattgcca
ccagatattctccagaaatatgaattgagaggcatgacaaagatgtttccctggcaagtg
gaatgtttatccaattaccgagtgctcgaggaaaacaagaacttagtttattccgcacca
acatcagcagggaagactttcgttgcagaaatgcttgtcataaaaacggtcttagaacgg
caaaagaaagtaattttcatcctaccatttgtctcagtggttcgagagaaaatgttttac
tttcaagatttgctatcgagcagtggaattcgagttgaaggtttcatgggaggtattgct
ccagcaggagggctggctgctgcccatatagcaatagcaaccattgaaaaagcaaattcg
ttaattaaccgattaatggaagaaggagatctttcatctttaggagccgtagttgttgac
gaacttcatctacttggagatccgcatcgcgggtacttgctcgaattgctgctaacaaaa
ctgaaatacatgactctaagggaagagcatgtgaaaatccaactcattggtatgtcagct
acacttccgaatctctcggttttagctgaatggttggatgcagagcttttcagcacagaa
ttcagacctgtccctctgaatgagcaatacaaggtacgcacaactatatatgacaataaa
ttcgtacctgtaagagagttagatccttcacctgaactaccaaacgattcggacaatatt
cttcaactttgcattgaaaccatatcgaatggacacagtacattgatattttgtcctacc
aaaaactggtgtgagaaactagcccatcaagttgctgcaatattcttcaagttgggtagc
gaagaaacaaccctggggaaaattcttaggaaccaattagattcgaatgcaatagaggaa
acactgtcacaactgaaaaggtgccctgctggtttggatgatatcttgaagagcacggtt
tcatttggtgtcgcatttcatcatgcaggtcttaccatggatgagcgcgacattattgaa
ggctctttcagaactgggtcactcagagttctcatagccacgtcaactttgagtagtgga
gtcaatctaccagcccgaagagtaattatcagatcgctaatgtttcatgggaaagtaatc
gatactttaacatacagacagatgattggacgtgctggtcgaatgggaaaggacactgca
ggtgaaagcatattaatatgtaagccaaatgaaaaaaaagcagcagaaagtttattgtca
gcacctttagatccagtagaatcttgtttagaaggttcgggaccacttattagagcactt
ttagaagctgtggcaagtgaagttgcctgtacacctgtggatattaacctttatggcaga
tgcatgctggctagtttcaatcccgaaaataacgttggtactcatacaaaagaagctatg
gactatttaactacgcatgaatttattacagttcaagaaactaaagagaaagaacaacgg
tgggtcgcaacagcacttggcaaagcctgtcttgcgtcatcagtttctcccggagaggga
ttatttttgtttgaagaattacaaagagcaagaaaatgtttcgttcttgaaacagaattg
cacattatatatctggtgactccatttaattctggtagtttaaccggtcaaatagattgg
atgatattttttaacttatggaaatctttgtccgaatgtgaacgcagagtcggacaaatg
gtaggaattgaagagcgtttcgtcatgtcagctattcgtggaattgctaagcatggaaaa
cagcaaaatatacacagaagattctttactgcattagccctacatgatttggtaagagag
atgccattgaccactgtgtcagaaaaatatgggtgcagtcgaggggttttgcaaagctta
caacaatccgcttcgacatttgctggaatggtgacacaattctgtaaacaactaggatgg
gattgcatggagttgttattttgtcagtttcaagcaagattacagtttggcgtttgcaga
gaattattggacttgcttcgtctcccaatgctcaatggtcttcgtgctagaagtctttac
aaagagggaattaagtgtgtcgcggatctagctactgctgacgaactctgtgttgaacgt
gctttacacaaagctttaccttttgaaagcgaaaaagaacaagatggtgaacacgtatta
gatgctgccaagagaaataaagtacgaagtatttttgttactggaagagatggtctaact
ccataccaagcagcagtcttgttggtgcaagaagcacgtactttagtgcagcatgaatta
ggtgtcacagaagtacactggaaacaagataatgtgacttcaagaaacaaacttggaaca
atattagacgataagagcaatgcatcggctattcaggatcatgacattaatcaaataaac
aatcaaattgctatgaatattccggcacctattagaacggcaagttcaatagcaaaagat
gctacttcacaggattgcacagagaatagtaaaactataaaagatgtatggaaatctgac
aatgattcagtggacgcaatacagcaaacgcaaaattgcgaaactggcaatgtcgtgtcg
acggttatttctgaactacattcacatcgaatagaatacagggaaattaaaatggatggc
tcaaaaatcactcatcatatccgtaacgaagaaattgatttacgaaacaagttacagggg
gaaacaatgcagacggaacttaataatcataagataacgcgaggagaaaagcatgtgaat
gaaatcgttaaaaataagcccaaattcagtcttctaggcgcgaaacgaaaaatacgagct
aaagatagcgtgacatcgatatccagtgataattttcaacagattataagtgaaacagcg
acttttggttccccaaaatctctcaaaacaccagataatgagcggagtaagagtaaaata
ttgaataatggtccagatgacacaaaaaccaacattactgaaagaaacttacaggaaaat
tgtgagaatatttgcaataaaatcagtgaaaagtccagtcctgctaagatggttttgcca
gatttcaaattgagtatttcgccagtcgttaccttgaagtggttatcatttaatgaaaaa
atgtctagtaagcagtcaagtgaagaattacgaaaaagtctcagaccagaatcattctca
gagcaaggtaaaaaagaccttagactcaatgatgaaaagaaagtatcactttcacgaagt
cccagtttatttggagatagtttatatttggattcgcagttctgcaatgaacttgaaaaa
aatgtttatggatccttagatatcactaaagttaaaggcacagaatgttctgcaattgat
agtccgtccatcagtttacagaagcctattgctgcaatagaaactaaaggaaagacgcca
gagataattatgaaacagaccagtagttctggagtcaaattttcatctaatacaaatgcc
atgcaaaatcgtgcagttactgaaaatccagacttgaataatcatattttcaacagtgaa
gaaattaacttctcatggaacagcactacatgggatcatttgaaggaatcgaataatgcc
tcaaatttagattctggaaaaaaaaaattaaatcttcaaatgacttctaatgattttgac
atcagtgatgaaatagcagcaacaccaatgatgcaaaatactcgcttgaaatccatttcc
ttaaaatcgaacatacaaaatgtacgcaatgtaaaacttatagacaattcgggaactcgc
aaacgtaagtttaacgagactcactctttgagtgatagtagtccagttctcaacgtattg
aatctcagtcataatcggagactatcctttggatcaaataagtcagattcagacgatcta
attgcagcatcacagaatttggaatctattaagaataccacaaaaagtagaaccagaata
aaactggaatcctcaaaaagaattatgattaataaaaagcagcacaattcaacacttaca
aagtgtaacgggcagtcaaatgccatcaaaaccaagaacattgagttgataagaaccggc
aatgctagcgctaaaaaagttttgtatcaagagaattgtagtacagatagtgttgtgtcg
aattcagaggaggattctcctatccaaagaatgcgagcaactcaaaacctgcacaaaaga
actgtgaattcgtcatttatcgttcagaagattgaaaacctacaaaaatgcaaaaaaagg
tgtttaaggtctgacgttagggaagaacaattaaattcagagcaaacagtgaattggaat
gtcttagacatcatcaacgtaactttgaatgacaatatattcaaattattcagtaacgaa
ttaaagcagaagactgagattgcgatagctttggctcacaataaatttgtaaatgataca
attggtattggaagtaaattagtttccggatcggcaagcagaatgaaaaataagtttaag
aaaaatgaaagctgtgtttacttagacacagttgtcaacggagttgccatttcttggggc
agaaatgttatttattggatctcttttgaaaatagaaaagaaggaagtattacattaaaa
gaccgtctgcaactcttacgagacgtattcacagattcatcggtaaatgtacgctgctac
ggaagcaaggaagtatacaaaaaacttcatcaatgctgtaagattacccctaactgtaga
ttccttgatccaaaagtagcagaatggttactacaacctgagactgacgaaagcaacatt
tgcgacatggctaagatgtattttccgcaaggtgctactatcttacaacatgcaagttct
ttaaaaagctctgctggaaccagttccggaaatgatgattattttttcgatagacataaa
gctgctgcagtggcaactgtgacatggcatgttacgagtaagcttattgaagagttacac
aagcagagtcaaacattgttaaatacatttgaagatgtggaaaccaaagtggtatcaaca
ctggctcgtatggaactaacaggaataggtctaaatcttgaatcacttcaagagctgtca
gccgttctccaagaagaaatgtcatcattggaacaaagagcatattcgttagctgggcga
aagtttagtttcacctcctcgaaagaagtggcacaggttctcgggatgtacaagggagtt
aaagtcagcacaaataaagccgtactagaaaattgcgataatccaatatctaaacaaatt
atgtcttggcggaaacttaatacaacgcagacaaaaatggtatttccgttattaaacctg
gcgcaacaaggtccacgagttcgagggtgttgtctaacacgtacagccactggccgtata
tcaatgcacgaaccaaatttacagaatgttccaagagattttaattctgaaaataatagt
tatgtaattagtatgcgaatggcatttgttcccacctgtggaaatatcatgttatcagca
gattattgtcaacttgagctaagaatattggcacatctttcaaaagatcccgtcttgtgt
gaaataatgaaaaaggattctgacattttcaagaacattgctgcgcagtggaactatata
accataaatgaggtagatgatgatatgcgtcaacgcacaaaacagctttgttatggaata
atttatggcatgggttcgagggctttggcaaaacaattatcagttactgaattagaagca
agcaggttcatggaaagttttatgggaacttatccaaacgtgaataattggcttaatcag
gtgataaccgaaagccgagaaaatggatatgtaacgactctaatggaaaggcgcagatta
cttccgagtctaaatagtgagataaaaagtgaaagatctcaagcagagagacaagcagtg
aatacaaaaattcaaggttcagcagcggacttggctaaaaaagctatggttctaatagat
gaaagactgcagaaagagtattcagatacatctagagtcatttcagaaatgaaaactaga
aaactaaggagcagcaaagattcgcagaatagaggggcctacttagttctgcaactacac
gacgaactcctatacgaggtgaatgccgcagatcttgatcgtgttgcagcaatagttaaa
atttcaatggaagaagcatatcagctaacaattccattgcctgttaaaatcagagttggt
ccgacgtggggcagtctaacagaatacactgttcagaagcccatagaatcatctgaatgt
attttttaa
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