KEGG   Neodiprion pinetum (white pine sawfly): 124216272
Entry
124216272         CDS       T08966                                 
Symbol
HDAC1
Name
(RefSeq) histone deacetylase HDAC1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
npt  Neodiprion pinetum (white pine sawfly)
Pathway
npt03082  ATP-dependent chromatin remodeling
npt03083  Polycomb repressive complex
npt04213  Longevity regulating pathway - multiple species
npt04330  Notch signaling pathway
npt04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:npt00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    124216272 (HDAC1)
   03083 Polycomb repressive complex
    124216272 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    124216272 (HDAC1)
   04350 TGF-beta signaling pathway
    124216272 (HDAC1)
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    124216272 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:npt03036]
    124216272 (HDAC1)
Enzymes [BR:npt01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     124216272 (HDAC1)
Chromosome and associated proteins [BR:npt03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     124216272 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     124216272 (HDAC1)
    BRAF-HDAC complex
     124216272 (HDAC1)
    REST complex
     124216272 (HDAC1)
    SHIP complex
     124216272 (HDAC1)
    MiDAC complex
     124216272 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     124216272 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    124216272 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    124216272 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 124216272
NCBI-ProteinID: XP_046476545
LinkDB
Position
4:17674040..17679756
AA seq 492 aa
MSTAPHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDEYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKTRLFENLRMLPHAPGVQVQAIPEDGAIVEDSEADEKVNPDERLPQRDLDKRIQHENE
YSDSEDEGDGGRRDNRSFKGSRKRPRLEKGQESGDSDLKKEDDIKSEIKENEKDDKANVT
SEEVKKDGSVNP
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgtccacagcaccgcacagtaagaagcgggtctgctactactacgacagtgatattgga
aactattactatggccaaggacatcccatgaaaccgcatcgcataaggatgacccataat
ttgttacttaattatggactgtacagaaagatggaaatttatcgaccacacaaagctacc
gccgatgaaatgaccaagtttcacagcgacgagtatatcaggttcctcagatcaatcagg
cccgacaatatgtctgaatacaacaaacaaatgcaacgcttcaatgtgggggaagattgt
ccggtgtttgacggcttgtacgagttttgccagctatcagcaggaggctcagtagcggct
gcagtcaagttgaacaaacaggcatcagaaatttgcataaattggggaggcgggctgcat
catgccaagaaaagcgaggcctctgggttttgctatgtcaacgacatagtccttggtatt
ttagaattgctcaagtatcatcagagagtattatatattgacatagacgttcaccacggc
gacggcgttgaagaagccttttacacaactgatagggtaatgacagtatcgtttcacaaa
tatggagaatatttccctggtactggtgaccttcgagatattggtgcaggaaagggtaag
tactacgcagtcaatattcctctgagggatggaatggacgatgaaagttacgaatcgata
tttgtaccaataatatcgaaagttatggagacgtttcaaccgtctgcagttgttctgcaa
tgtggtgctgattcgttaacaggtgacagacttggctgcttcaatctaacggtccgagga
catggcaaatgcgtcgagtttgttaaaaagtacaatttaccgttcctcatggtaggtggc
ggtgggtacaccatccgtaacgtttctaggtgttggacatatgaaacatcagtagctttg
ggatcagaaatagccaatgaactgccctacaatgattactttgaatatttcggtcccgac
ttcaaactgcacataagtccctctaatatggcgaaccagaatacacctgaatatctggag
aaaatcaaaacgagattattcgaaaatttgaggatgctacctcacgcaccaggggttcaa
gttcaggccattcctgaagacggcgccattgtcgaggactctgaagccgacgagaaagta
aacccagacgaaagactgccgcagagagatttagacaaacgaatacagcacgaaaatgag
tatagcgatagcgaagacgagggagatggtgggagaagggataacagatcattcaagggc
tccagaaaaaggccgcgactcgagaaagggcaagaaagcggtgattcagatttgaaaaaa
gaagatgatatcaaatcagagataaaagagaacgagaaagatgacaaagccaacgtaacg
agcgaagaggtaaagaaagacggaagtgtgaatccctga

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