Neodiprion pinetum (white pine sawfly): 124216349
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Entry
124216349 CDS
T08966
Symbol
beta'COP
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npt04131
]
124216349 (beta'COP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npt04147
]
124216349 (beta'COP)
Membrane trafficking [BR:
npt04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
124216349 (beta'COP)
Exosome [BR:
npt04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
124216349 (beta'COP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR75_2nd
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_LRRK2
VPS11_N
Beta-prop_WDR35_TULP_N
WD40_2
HEAT_GCN1
Clathrin
Motif
Other DBs
NCBI-GeneID:
124216349
NCBI-ProteinID:
XP_046476718
LinkDB
All DBs
Position
4:complement(42728448..42736335)
Genome browser
AA seq
955 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPSEPWMLCSLYQGNVNIWNHESQTLAKTFEVCDLPV
RTAKFVARKNWVVTGSDDMQVRVFNYNTLERVHAFEAHSDYVRSIAVHPTQPFILTSSDD
MLIKLWNWDKAWLGQQVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSSTANFT
LDGHEKGVNCVDYYHGGDKPYLISGADDKYVKIWDYQNKTCVQTLEGHTQNISAVCFHPE
LPIVLTGSEDGTVRIWHAGTYRLESSLNYGFERVWTISCMRGSNNVALGYDEGSVMVKVG
REEPAVSMDSLGGKIVWARHSEVQQVNLKALGEEAQDGERLPLAVKDMGACEIYPQTIQH
NPNGRFLVVCGDGEYIIYTSMALRNKAFGQASEFVWAADSSQYAVREGTSSVKIFKNFKE
RKSFKPDFGADGIFGGFMLGVSSGSGLSFFDWDSLKLIRRIDIQPTHVYWAENASLVALA
TADQYFILKFHADAVNNLPENTEDIEDAFEMVAEMSEAVKTGLWVGDCFIYTNSVNRINY
FVGGEVVTISHLDRPMYLLGYVPRDNRLYLCDKELSVVSYSLLLSVLEYQTAVMRKDFET
ADRVLPTVPKEHRTRVAHFLEKQGFKEQALAVSTDPEHRFELALALGDLRTAHDLAKEAS
SQQKWRQLAALATQKGKLRLAQECLHHAQDFGGLLLLATSTGNAGMIRKLGEAADDSGKN
NISFLSNFLLGDIDKCLDILIKTDRIPEAAFFARAYAPSKISSVVKLWREKLSIVSEKAG
QSLADPEQYENLFPGFRESLKVEQFLRDEAKQTIPAAAYPSVKPNVARKPLDEMQAAEEA
GNFFYRGELLPGASDEPELKDSGDLLANRLVDLDISKPTFIPAPATNQPPTSLPAAPLKP
SVAAQPLVPQQVTKPASTTRPLTVDDDDDIDFDLELDENIDTTDVNLDDDLLGED
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgcgactagacattaaacgcaagctgacggcgagatcagacagagtaaagagt
gtcgatcttcatccatctgagccatggatgctgtgttcgttataccagggaaatgtcaac
atctggaatcacgagtcacagactttggcaaagaccttcgaagtctgcgacctacctgtc
agaacagcaaagtttgttgcaagaaaaaattgggtcgtcactggctctgatgatatgcaa
gttagagtttttaactacaacacattggaacgtgttcatgcgttcgaagcacacagcgat
tatgtcagatccatcgcagttcatcccacccaaccgttcatccttaccagcagtgacgac
atgctgataaaattatggaactgggacaaagcttggctcggccagcaggtcttcgagggc
catacccactatgtcatgcaaattgtgttcaatccaaaggacaacaacacatttgccagc
gcatctctggatcgcacggtaaaagtctggcagctcggttcatcgacagccaatttcacc
ctcgacggacatgagaagggtgtgaactgcgtagattattatcacggaggtgacaagcct
taccttatttccggagctgacgataagtacgtcaagatatgggattaccaaaataaaacc
tgcgtccaaacccttgaaggacacacacagaatatatctgcagtgtgctttcacccagag
ctgccgattgttttgaccggttcagaagatgggacagttagaatttggcatgctggtaca
tacaggctagagtcgtcacttaactacggctttgaaagagtttggacgatttcctgcatg
cggggatctaacaacgtcgccttagggtatgacgagggtagcgtaatggtcaaagtcggt
agagaagagcctgccgtttcaatggattctttgggcgggaaaattgtatgggcaagacat
agcgaggtgcaacaagtaaacctaaaagcactgggagaagaggcccaggatggagagcgg
cttccgttggctgtcaaagatatgggagcgtgcgaaatttacccgcaaactatacaacac
aatccaaatgggagatttttggttgtttgcggggatggtgaatacattatttacacttcg
atggctctgagaaacaaggctttcggacaggcatcggaatttgtatgggctgctgattcg
agtcagtatgctgttagagaaggaacaagctctgtgaaaatcttcaagaatttcaaagaa
agaaaaagcttcaaacccgattttggggccgatggcatctttggtggatttatgctggga
gtatcttccggctctggtctttccttctttgattgggattccctaaagctgattcgccgc
atcgacattcagccgacgcacgtctactgggcagagaacgcatcactggtagcgctagcg
actgccgatcaatactttattttaaaattccatgcagatgctgttaataatctgccagaa
aacactgaagatatcgaagatgcattcgagatggtcgcggaaatgagtgaggcagtgaaa
accggtctctgggtaggcgactgcttcatttacaccaacagcgtaaatcgaatcaattac
tttgtcggaggcgaagtcgtcaccatatcacatttggacaggccgatgtatctgttgggt
tatgttccacgagacaacaggctttacctatgtgacaaggaactctccgtggtttcatac
tctctcttgctatccgtactggaataccaaaccgcagttatgcgaaaagactttgaaacc
gctgacagagtgctgccaactgtaccaaaagagcatcgcaccagagtggctcactttttg
gagaaacaaggtttcaaagaacaagcgctggcagtctctacggatccagagcatagattc
gaattggctttggcactaggtgaccttaggacggcgcatgatttagcaaaagaagctagt
agtcaacagaaatggcgacagctcgcagcccttgccactcaaaaaggcaaattgcgtttg
gctcaagaatgcttgcaccacgcgcaagactttggtggccttctactactggctacaagt
accggcaatgctggaatgataagaaaacttggcgaagctgccgacgattcaggaaaaaac
aacatttcgtttctctcgaatttcctccttggagatatcgacaagtgtttagatatcctg
ataaaaactgataggattcccgaggctgcattctttgcgagagcctatgctcccagcaaa
atatcttctgtggtaaaattgtggcgtgaaaaattatcgatcgtgagcgaaaaggctgga
cagagcctggcagacccagaacaatacgagaatctctttcccggatttcgagaaagtctc
aaggttgaacagtttttgagggacgaagccaaacagaccataccagcagccgcttacccg
tcagtgaagccaaatgtcgcccgcaaacctctggacgaaatgcaagcggccgaagaggct
ggcaacttcttctatagaggtgaactacttccaggagcttcagatgagcccgagctcaaa
gactcgggtgatcttctggccaatcgactggtagatcttgatattagcaagccaactttc
atccctgccccagccacaaaccaacctccgacaagccttccagctgctccgttgaaaccc
tctgtagctgcacaacctctggtaccgcaacaagtcactaaaccagcaagcacgacaaga
ccattaaccgtagatgatgacgacgacatagattttgacctcgaacttgatgaaaatatc
gataccactgatgtaaatttggacgatgacttgctaggagaagactag
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