Neodiprion pinetum (white pine sawfly): 124216371
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Entry
124216371 CDS
T08966
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npt03009
]
124216371
04121 Ubiquitin system [BR:
npt04121
]
124216371
Ribosome biogenesis [BR:
npt03009
]
Eukaryotic type
90S particles
Other 90S particles
124216371
Ubiquitin system [BR:
npt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124216371
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
eIF2A
WD40_RFWD3
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
124216371
NCBI-ProteinID:
XP_046476778
LinkDB
All DBs
Position
1:complement(913644..918048)
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AA seq
445 aa
AA seq
DB search
MKVKVLCRNPDEYLRETKRDIHKVPRNYDPSLHPFEAAREYTRALNAVKLERVFAKPFIG
SLDGHKDSVSCLSKHPLKLSMLLSGAFDGEIKVWNLSQRVCERSFLAHDGIVRGIAFSSD
GESFLSIGDDKTIKTWKAESSITGEQEDPINTIVSKTVLTGLSHHRKDPVFATCGEVCQI
WEETRNEPVRTLKWGVDSLHDVKFNPIQTNLLVACASDRSTILYDTRESGPLRKVVMKLR
NNKISWNPMEAFVFTCASEDYNLYTFDTRKLKSPVNVHMDHVGAVVDVDYAPTGKEFVSG
GYDKSIRIFDVAKGHSRDVYHTKRMQRLTCVGWSLDDKYILCGSDEMNIRIWKSRASEKL
GVLKPREKAALNYSAALKDKFASHPQVRKIARKRHVPKHIYNAQAELRTVREKVKRKESN
RRAHSKPGAVPFVSERSRHVVREDE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcaaggtgctctgcagaaatcccgatgaatatctgagagaaaccaaacgagat
attcataaagttcccagaaactacgatccatccctgcatccgtttgaggctgcgagagag
tatacaagggctttaaatgcagtcaagctagagagagtattcgccaagccattcataggg
agtttggatggccacaaagacagtgtgtcttgtctttccaagcaccctctaaagttatcg
atgcttttgagcggagcatttgatggagagattaaagtgtggaatttatcgcaacgcgta
tgcgagcgctcgtttctggctcacgacggtatagttcgaggcattgcattttcatcggat
ggggaaagctttctgagtatcggcgatgacaaaactataaagacctggaaggcagaaagt
tcaataacgggagaacaggaggatcctattaacaccattgttagtaagactgtcctaacg
ggcttgagtcatcatcgaaaagaccctgtgtttgcaacctgtggcgaggtatgtcaaatc
tgggaagagaccagaaatgaacctgtgcggactttgaagtggggtgtggacagtttacac
gatgttaaattcaatcctatccaaacgaacttgttagttgcctgtgccagcgacagaagc
acaattttatatgatacgagggaatctggtccactgcgaaaagtagtcatgaagctaaga
aacaataagatatcgtggaatccgatggaggcttttgtttttacctgcgccagcgaggat
tataacctctacacgtttgatacgcgaaaattgaagtctcctgtgaacgtgcacatggat
cacgttggtgcagttgtagatgtagattacgccccgacgggtaaggaatttgtctctgga
ggatatgataaatcgatccgaattttcgatgtggctaaaggtcattcgcgagacgtttat
cacactaaacgtatgcaaaggcttacttgtgtcgggtggtcactagacgacaagtacatt
ttgtgtggtagtgacgagatgaacatcagaatttggaagtctagggcttccgaaaagctt
ggagtgttgaaaccaagagagaaagcagccctcaattacagcgcagctttgaaagacaag
tttgccagtcatccgcaagttcggaaaatcgctcgtaaaagacacgtacccaagcacata
tataacgctcaggctgagcttcgtacagtgcgagagaaagttaagcggaaggaaagcaac
agacgggctcactctaaaccgggcgcagtgccattcgtgtctgaaagatcaagacatgtt
gttcgtgaagatgaataa
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