Neodiprion pinetum (white pine sawfly): 124216436
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Entry
124216436 CDS
T08966
Symbol
obe
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npt03400
]
124216436 (obe)
Enzymes [BR:
npt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124216436 (obe)
DNA repair and recombination proteins [BR:
npt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
124216436 (obe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
AAA_19
Helicase_PWI
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
124216436
NCBI-ProteinID:
XP_046476901
LinkDB
All DBs
Position
4:28238240..28251087
Genome browser
AA seq
2136 aa
AA seq
DB search
MRELPRLTRSLRAFTDLGRLKKLDNEKNNLIAKRLERAAKSNKGPTWSEICKFVDKNAVP
YLHQIHHEASSFCEGQTSELKDEAAIFILKLLINENNVSQKNLKILRQTFGSITLEKANT
IMQLIKAIRERISEASMEYILNSEEKENGLLDFPPHMFGLDIPFFPAKVTWPETKKLQDM
SAKNPIKITSKFTMAYNAETVSSNKTEFEKSRFTKGLKKCYEKYSAEMIYEDFGHMIVDK
LKCGGDNLQTELFDLLGYENIEFIEYVLEHQKSIVALFTIQKTQKNNTPILRPQVGCQVI
VQSEKEKQLMKQYRKEEKKLNKITNKLENGEDDDEETFDPVELRLKRQEALMRQAMQAPI
LNTTQRNIFPSGIRAERYPFVFDSKLTARAAAGFVSGQKVMLPENVERKDSQLCEEVHIP
VPPAAVLDVGNNPVIISSLDEVGQMAFHGIKSLNRIQSIVFDAAYHTNENLLICAPTGAG
KTNVAMLTVIHQIKLHIAQGVLKRDQFKIVYIAPMKALAAEMTSSFNKRLGCLGVSVREL
TGDMQLTKVEIQQTQMIVTTPEKWDVVTRKGTGDIALTSIVKLLIIDEVHLLHGDRGPVV
EALVARTLRQVESSQSMIRIVGLSATLPNYTDVAKFLRVNPHKGLFYFDHRFRPVPLGQT
FIGVKAVKPLQQMADMDLVCYNHVVDMVRKGHQVMVFVHARNATIRTATVLKEMALQNGT
QKLFMSDGNTGLAQKALAKSRNKHLGELFSYGFSVHHAGMLRTDRNLVEKYFADGLIKVL
VCTSTLAWGVNLPAHAVVIRGTEIYDSKHGTFIDLGILDVLQIFGRAGRPQFDTSGHGTI
ITTHNKLSHYLSLLTNQFPIESNFITYLADNLNAEITLGTISNVEEAVEWLSYTYLFVRM
RLNPQVYGINYQDVIEDPNLERKRKELIDTAAKALDKAKMIRYITRTGDLSVTDLGRTAS
HFYIKYDTVEIFNEHMKPIMTEADVLGMISRSQEFEQLKVRDDEMDELDNLTTDYCEVLV
QGGAENIHGKVNILLQTYLSRGRVNSFSLLSDQSYITQNAVRICRALFEMVLRKNNAIMA
GRLLGIAKMLELQQWDHMSPMRQFCCLPQDIITKIEDRHLTMEKLKDMDIKEIGNILRNQ
KMAGLIKKCCSEFPSLELEANLQPITRTVLRIRLKITPDFRWNDRVHGKSSEAFWIWIED
PDSNFIYHHEYFLVTRKMVYEKADQDLVMTIPLSEPLPTQYFVKAVSDRWLGCEMVLALS
FQGLILPETHPPHTDLLELQPLPVTALKDPKFENLYKFSHFNPIQTQIFHCLYHTDNNVL
LGAPTGSGKTIAAEIAMFRVFKEYPGQKVVYIAPLKALVRERINDWKVRIEEKLGRTVVE
LTGDVSPDVRAIASASVIVTTPEKWDGISRSWQTRNYVQKVALIIIDEIHLLGEDRGPVL
EVIVSRTNFIASHTSKALRIVGLSTALANAVDLANWLGIEQMGLYNFRPSVRPVPLEVHI
SGFPGKHYCPRMATMNRPTFQAIRQHAPCSPSLVFVSSRRQTRLTALDLIAYLAAENDPK
QWLHMLDDEMDNILVNIKDTNLKLTLAFGIGLHHAGLQDRDRRTVEELFVNNKIQVLITT
ATLAWGVNFPAHLVVIKGTEYYDGKSKRYVDMPITDVLQMMGRAGRPQFDDSGVAVVLVH
DIKKNFYKKFLYEPFPVESSLLEVLPDHINAEIVAGTIKNKQEFLDYLTWTYFFRRLMKN
PRYYELEVLDPAEVNLYLSGLVEKTLSVLIDSYCIDYDEGEKCLSPLSMGRIASFYYLSH
QTMLLFNNNLKQNLTLEQLLRIACDAYEYNQLPVRHNEDLLNEELAKMCRHAVDSSTLDS
PNTKTFLLLQAHFSRLPLPCADYLTDLKSVLDQAIRILQAMIDIVADRGWLGAALRLMQV
LQMIIQARWADESALLTLPRLEKEHLRLFSTLPKSLPMLCTVTHGNYSRLANALQEEFVD
SEIQQIHQVIKEMPVISVELTLQGWWADGSTEKKIPQPAGPNCWIDVHESSDYTLIVGMK
RKNHSHNLKAHCPKFPRGKDEGWFLILGDEIETELLALKRASGIRGQRKCSQLFFSTPPC
IGRKKLTFYLMSDCYMGLDQQYDVHLNVIPSSSTDQ
NT seq
6411 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaactgcctcggctcacacgttcactgcgtgccttcacagacttaggacgatta
aagaaacttgacaatgagaagaataatcttattgccaaacgactagagagagctgcaaaa
tcgaacaaagggccaacctggtcagaaatatgcaaattcgtagacaaaaatgctgttcca
tatttacatcaaatacatcacgaagcttccagtttctgcgagggacagacttccgaacta
aaagacgaagctgcaatattcatattaaagcttttgattaatgaaaataatgtcagccag
aaaaatctcaagatcttacgacaaacattcggttcgattacactggaaaaagctaataca
ataatgcagttaataaaagcaatccgagagcgaatatcagaggcatcaatggaatacata
cttaattcagaagaaaaagagaatggtttactggattttccaccccacatgtttggtctt
gatattcccttttttccagcaaaagtcacttggcccgaaactaagaaactgcaagatatg
tctgcaaaaaatccaatcaaaattaccagcaaattcactatggcatataatgctgagact
gtttcatcaaataaaactgagtttgaaaagagtcgattcacaaaaggactgaaaaaatgt
tatgagaaatactcagcagaaatgatatacgaagattttgggcatatgatagtggataag
ttaaaatgtggcggtgataatcttcaaacagaactctttgatcttcttggctatgagaat
atagaattcattgaatatgttcttgagcatcagaaaagtatcgttgccttattcactatt
caaaagactcaaaaaaacaacacacctatactaaggccgcaagtaggatgtcaagtaatt
gttcagtctgagaaagaaaagcaactgatgaaacagtatcgcaaggaagagaaaaagcta
aataaaattacaaacaaattggaaaacggtgaagatgatgacgaggaaacttttgatcct
gttgagctacgtctaaaaagacaagaagcattgatgagacaagccatgcaagctccgatc
ctcaacacgactcaaagaaacatttttccgtctggtattcgagcagagaggtatccattc
gttttcgattcaaagcttactgcgagagctgctgcaggctttgtttctggacaaaaggtc
atgttaccagaaaatgttgagagaaaagattctcaattatgcgaggaagtacatatacca
gttcctccagccgcagttctggatgttggcaataatcctgtgataatatcttcattggat
gaggttggtcaaatggcgtttcatggtataaaatcattgaatagaatacaaagcatagtc
tttgacgctgcctatcatacaaacgaaaacttgttgatttgtgctccaactggagctggt
aaaactaatgttgcaatgttaactgtgatacatcagattaaactgcatattgcacaagga
gttttgaaaagagatcaatttaaaatagtatatatagcacctatgaaagctttggcagct
gaaatgacatccagtttcaataaaagattaggatgtttgggtgtttctgtgcgagaactc
actggtgatatgcagctaacaaaagttgagattcagcaaacacagatgattgttactacg
ccagaaaaatgggatgttgttacaaggaaaggaactggagatatagcgctcacaagtata
gttaagttactaattattgatgaagttcatttgcttcatggagatcgtggacctgttgtt
gaagcattggttgcccgtaccctcagacaggtcgaatcatctcaaagtatgatcagaata
gttggactctctgcaactctacccaattatacagatgtggcgaaattcctccgggtaaat
ccacacaagggtttgttttactttgatcatcgatttcgacctgtacctctcggccagact
tttataggtgtgaaggcagtgaaacctttacagcaaatggctgatatggaccttgtatgt
tacaatcacgttgtcgatatggttcgcaaaggtcatcaggtaatggtgtttgtacatgct
cgtaatgctacaatccgaacagcaacggttctcaaagaaatggcattacaaaatggcacg
caaaaattatttatgtccgatggtaacactggactcgcccaaaaagcactggcaaaatcc
cgaaacaagcatctcggagagttattttcctatgggttttctgtacatcatgctggaatg
ttacgtacagataggaatctggtggaaaaatattttgcagatggtttgataaaggttctt
gtgtgcacatcgacactagcttggggtgttaatttaccagcacatgccgtcgttatacgt
ggtacagaaatatatgattcaaaacatgggacattcattgacctaggcattttagatgta
ttgcaaatatttggtcgcgctggtcgaccacaatttgatacatctggacatggtacaata
atcacaacccataacaaattgtcccattatctttcgttactgaccaaccaatttccgatt
gaaagtaactttattacctatttggcggacaatttgaatgctgagattacactaggaacg
atatcgaatgtagaagaagcagtcgagtggctaagttacacatatttgtttgttcgaatg
agactcaaccctcaagtatatggaatcaattatcaggatgttattgaagatcccaacttg
gaacgaaaacgaaaggagttaattgacacagctgcaaaagccttggataaagctaaaatg
attcgttacattactcgtactggagatctcagtgtaactgatttgggtagaacggcgagt
catttttatattaaatatgatactgtggaaatattcaacgaacatatgaagcccatcatg
actgaagctgacgtactgggaatgatatctaggtcacaagaatttgagcagcttaaagtc
agagatgatgagatggacgaattggacaatttaacaacagactattgcgaggttttagta
caaggtggagcagagaatattcatggaaaagtgaatattttactgcaaacatacctgtca
cggggtcgtgtcaattctttttctttgttatcggatcagtcctacatcacacagaatgct
gttcgtatctgtcgagctttatttgagatggtattgcgaaagaataatgcaattatggca
ggacgtttgctaggcatagcaaaaatgttggagttacaacagtgggaccatatgagcccc
atgcgccagttctgttgtttgcctcaagatattatcacaaaaattgaagatcgtcacctt
acaatggaaaaacttaaagatatggatattaaagaaattggaaatattttgagaaaccaa
aagatggcaggtttgattaaaaagtgttgcagtgaattcccttccctagaattagaggca
aacttgcaaccaatcacacgaacagttcttcgcattcgtttaaaaattactccagatttt
cgctggaatgatagagtgcatggaaaaagttcggaagccttttggatttggatagaagac
ccagacagtaattttatctatcatcatgaatactttttggtaacaaggaaaatggtttat
gagaaagcagatcaagatcttgtgatgacaattccactctcagaacctttgccaactcaa
tactttgtgaaggctgttagcgatcgttggttaggatgtgaaatggtactagctttatca
tttcaaggtctgatccttccagagactcacccaccacatactgatttattagaactacaa
ccactgccagtaactgcattgaaggatccgaagttcgaaaatttatataaattttcccac
ttcaatccaatccaaacgcagattttccactgcctttaccataccgataataatgttctt
ctgggagctccaacgggttcgggaaaaacaattgctgcggaaattgctatgttcagggta
ttcaaagaataccctggtcaaaaagtagtgtacatagctccactcaaagctttagtcagg
gaaagaatcaacgactggaaagtgagaatagaagaaaaattaggaagaactgttgtcgag
ttaacgggtgatgtttctccagatgtacgagcaatagctagtgcaagcgtaatcgtaaca
actcctgaaaagtgggacggaattagcagaagttggcagacaagaaattatgttcaaaaa
gtagcactcatcataatagatgaaatccaccttctgggtgaagacagaggtccggttctg
gaagtgattgtctcacgaacaaactttatcgcctctcatacttctaaagcattgagaatc
gtgggcctttctacagcgttggctaatgctgttgacttggcaaattggctaggaattgaa
cagatgggactttataatttccgaccatcagttcggccagtgccattagaggttcacatt
agtggattcccaggcaagcactattgtccacgaatggcgacgatgaatcgtccaactttc
caagcgatcaggcagcatgctccctgtagcccttctcttgtttttgtgtcttcgcgaagg
cagactcgtttaacagcattagatttgattgcttatcttgctgccgaaaatgatccaaaa
caatggttacatatgcttgacgatgaaatggacaatattctggtcaacatcaaagacact
aatttaaaattgaccttagcttttggaattggactccatcatgctggtctgcaggatagg
gatagaagaactgtagaagaactctttgtaaataacaaaatacaggtactaataacaact
gcgactttagcttggggagtaaactttcctgctcacttggttgtaataaaaggtactgaa
tattacgatggaaaatcaaaacgatacgttgacatgccaataacagatgtactacagatg
atgggtcgagctggtagacctcaatttgatgattctggggtagctgtagttcttgttcat
gacatcaagaagaacttctacaaaaaattcttgtacgagccatttccagtcgaatcaagc
ctactagaagtattaccagatcacattaatgccgagattgttgccggcacgataaagaat
aagcaagaattccttgactatttaacgtggacgtacttctttagaagattgatgaagaat
ccgaggtattacgaactcgaggtgttagatccagcagaagttaatttatatctttctggg
ctggttgagaagactctcagtgtattaatagattcgtattgtattgactatgatgagggt
gaaaaatgtttgtctcctctttcaatgggcaggatagcatcgttctattatctatcccat
cagacaatgttattgttcaacaataatttgaaacaaaatctgacactggaacaactcttg
cgaatcgcatgcgatgcctatgaatacaatcaattaccagtgcgacacaatgaagactta
cttaacgaggaattggcaaaaatgtgtcgtcatgcggtggattcatcaactttagattct
ccaaatactaaaacatttctactactgcaagcacatttctccagattgcctttaccctgt
gcagactatctaactgatcttaaatctgttcttgaccaagctatcaggatactgcaggca
atgatagatattgtggccgaccggggttggcttggagcagcattgcgtctcatgcaagtg
cttcaaatgattattcaagcaagatgggctgatgagtctgcgttgctaactttaccacgt
ctggagaaggagcatttgcggttattctctacgttgccaaaatctttgcccatgttatgc
actgtcacccatggaaattacagccggctagcaaatgctctacaagaagaatttgttgac
agtgaaattcagcagatacatcaagttatcaaggaaatgccagtaatatccgtagaactg
acattacaaggctggtgggcggatggtagtacagagaagaaaatacctcagcctgccgga
cctaattgctggatagatgttcacgaaagcagtgattacacactaattgtgggcatgaaa
agaaagaatcactctcacaatctcaaagcacattgccctaagtttccaagaggaaaagat
gagggttggtttttgatattaggtgatgaaatcgaaacggagttattagctctaaagaga
gcatcgggtattagagggcagcgcaagtgtagtcagctatttttttccactccaccatgc
ataggtcgcaaaaaattgacgttttatctgatgtctgattgttacatggggctggatcaa
cagtacgacgtacatttgaatgtcattccatcgtcaagtactgatcaataa
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