Neodiprion pinetum (white pine sawfly): 124216442
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Entry
124216442 CDS
T08966
Name
(RefSeq) regulator of gene activity protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124216442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npt03019
]
124216442
Messenger RNA biogenesis [BR:
npt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124216442
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124216442
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
124216442
NCBI-ProteinID:
XP_046476921
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Position
4:complement(28189645..28199308)
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AA seq
460 aa
AA seq
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MANLNFEQLPRSIANASLTSRGGGGGGLSSSTLPGHVTPTSGMFSGSSASTSSTANSTAV
GANVYPGGTGGAQPAAHPTQQQQLSPMGSRGLFGQRVFPDRRAMPAIGNSNPMGSMGSFG
IHPSRSYGSQGAINNFHSVFGSGGGGDTSTPPLLDLSEFPSLTNRGQGDSMPQPSPMPGK
QPYVGMVKQPTSEASEFTMSSEDFPALPGTQSREGPSPGGSVSGDKGMVVGLGPEIGQDV
LQVNRAPGSEKSLASKRGIQTSPDGKVTHIPASMVKDQFGMVGLLTFIRAAETDPNLVSL
ALGQDLTALGLNLNSPENLYQNFGGPWAETPCRPQDIDFHVPPEYLINASIRDKLAPVKL
NRYKDDLLFYMFYTNVGDVLQLAAAAELYSREWRYHMEEKVWITQAPGLGPVEKTSTYER
GTYYYFDAQNWRKVAKEFHLDYTKLENRPHLPATFHQSQP
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggccaacctgaactttgaacaactgccacgcagtatagcgaacgcaagccttacctcg
cgtgggggtggtggggggggcttaagctcgtcgacccttccgggtcatgtcacgcctacc
tcgggcatgttctcagggtcgtctgcaagtacatcgagtacagcaaactcaaccgctgtc
ggggccaacgtctacccaggtggaaccggaggcgcacaacctgccgcgcatcctacccaa
caacaacaactctcacctatggggagcagagggctctttgggcagagagttttccctgac
agacgtgccatgcctgctattgggaactcaaacccaatgggtagtatgggcagttttgga
attcatccaagtcgcagttacggatctcaaggtgcgatcaacaatttccactctgtattt
gggagtgggggtgggggagacaccagcacccctccccttctggacctgtcggagttcccc
tcactgacgaacagaggccagggtgactctatgcctcagccaagtcctatgccgggcaag
caaccctatgttggcatggtaaagcagccaacgtcagaagcaagtgaatttactatgagc
tcagaagactttcctgcattaccaggcacacaaagcagggaaggaccgtcacctggtggc
agtgtttctggagacaagggaatggttgtgggacttggtccagaaattggccaagatgta
ctccaagtgaatagagctcctggctctgaaaagtcactggcatcgaaaagaggcattcaa
acatcacctgatgggaaagtcacgcacatacctgcaagtatggtaaaggatcaattcggg
atggtgggactgttgacgtttatcagagcagcagaaacagatccgaatctcgtatcattg
gcgttggggcaggacctcaccgcccttgggcttaatcttaactcacccgaaaacctttat
cagaattttggtggaccttgggcggaaacaccctgtcgaccccaggacatcgatttccat
gtaccaccagagtatctcattaatgcctctatcagggataaactggcacctgttaaacta
aatcggtataaagatgatctcctattttatatgttttacacgaacgttggagatgtgtta
caacttgcggcagcagcagaattgtatagtcgagaatggcggtatcacatggaagagaag
gtatggatcacgcaggcaccgggtttgggtcctgtcgaaaagacatcaacatacgaacgg
ggtacttattactatttcgatgcgcaaaattggcgaaaggttgcgaaggagttccattta
gattacactaagttggaaaacaggccgcatctccccgccacttttcaccaatcccagcct
tga
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