Neodiprion pinetum (white pine sawfly): 124216629
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Entry
124216629 CDS
T08966
Symbol
slo
Name
(RefSeq) calcium-activated potassium channel slowpoke isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
npt04040
]
124216629 (slo)
Ion channels [BR:
npt04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
124216629 (slo)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
124216629
NCBI-ProteinID:
XP_046477294
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Position
4:complement(3823366..3936670)
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AA seq
1161 aa
AA seq
DB search
MTCDVTTESPPVDDCLKVRKWWCFLLSSIFTFLAGLLIVLLWRAFAFLCCRKEPEFAPND
PKQKEQKAARQGKEFEGTFMTEAKDWAGELISGQTTTGRILVVLVFILSIASLIIYFIDA
SNCSEKVERCQKWSNNITQQIDLAFNIFFMVYFFIRFIAASDKLWFMLEMYSFVDYFTIP
PSFVSIYLDRTWIGLRFLRALRLMTVPDILQYLNILKTSSSIRLAQLVSIFISVWLTAAG
IIHLLENSGDPFEFTNPQHLSYWTCVYFLIVTMSTVGYGDVFCQTVLGRTFLVFFLLVGL
AIFASCIPEIIDLIGTRNKYGGTLKNERGRRHIVVCGHITYESVSHFLKDFLHEDREDVD
VEVVFLHRKPPDLELEGLFKRHFTTVEFFQGTIMNPIDLQRVKVHEADACLVLANKYCQD
PDAEDAANIMRVISIKNYSDDIRVIIQLMQYHNKAYLLNIPSWDWKQGDDVICLAELKLG
FIAQSCLAPGFSTMMANLFAMRSFKTKWLVDWNQSPDMQAWQNDYLRGTGMEMYTETLSP
TFIGMPFAKATELCFTKLKLLLLAIEIKGDAGNDSKISINPRGAKIAANTQGFFIAQSAD
EVKRAWFYCKACHDDIKDETLIKKCKCKNLATFRKGVRAVQMVGRASEDFSYANDHHPPP
TFTPPELPKMVHVRGEISRERDDLNAMRNHRNSVGMTLMNSTKQVNKVKPNVNRTPNDSL
SSPNQSYNNQRSQEESAYSGYHLAYEVKKLMPTSRGSGGNNVNNNGGLQVGIADDQAKDF
DFEKTEMKYDSTGMFHWSPARNLEDCILDRNQAAMTVLNGHVVVCLFADPDSPLIGLRNL
VMPLRASNFHYHELKHVVIVGAVDYIRREWKMLQNLPKISVLNGSPLSRADLRAVNVNLC
DMCCILSAKVPSNDDPTLADKEAILASLNIKAMTFDDTIGVLSQVGSPIVLQRRGSVYGA
NVPMITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSTTYFNQNAL
TLIRSLITGGATPELELILAEGAGLRGGYSTADSLSNRDRCRVGQISLYDGPLAQYGEGG
KYGDLFVAALKSYGMLCIGLYRYRFRDTSSSCDASSKRYVITNPPDDFTLLPTDQVFVLM
QFDPGLEYRPSRGARGKDDAS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgcgacgtgaccacggagtcgcctccggtagacgactgcctcaaggtacggaaa
tggtggtgcttcctgttatcaagcatattcaccttcctggcggggctcctcatcgtctta
ctctggcgggccttcgctttcctctgctgtcgaaaggagcccgaattcgctccaaatgac
ccaaagcagaaggagcagaaggccgcccgccaggggaaggagttcgagggcaccttcatg
accgaggcgaaggactgggccggcgaactgatatccgggcagacgacgacgggacgcatt
ctcgtggtccttgtcttcatacttagtatagcatcgctcataatatacttcatcgacgct
tccaattgcagcgagaaggtggaacggtgccagaagtggagtaacaacattactcagcag
atagacttagctttcaatatattttttatggtctacttttttatacgctttatcgccgcc
agtgacaagctgtggttcatgctagagatgtactcgttcgtcgactactttacgatacca
ccgtctttcgtctcgatttatctcgaccggacgtggataggactgaggttccttcgagcc
cttcgactgatgaccgttcccgacatcctacagtacctaaacatattaaagacgtcgagc
tccattcgtctcgcccagctcgtgtcgattttcatctccgtatggctaactgccgccgga
atcattcacctgcttgaaaattctggagatccgttcgagttcacgaatccacagcacctg
tcttattggacctgcgtttacttcttgatcgttactatgtcgacggttggatacggcgac
gtattctgccagaccgttctcgggcgtacattcctagtgttttttctactcgtcggtctg
gccatattcgccagttgtattcccgagataattgacctgatcgggacgcgaaacaagtac
ggcggcacattgaagaacgagcgaggtcgcagacacattgttgtttgcggtcacatcacg
tacgagtcagtgtcccacttcctcaaggactttcttcacgaggatcgcgaggacgtcgac
gttgaggttgtctttttgcacaggaaaccgccggacctagagctggagggactgttcaaa
cgacacttcaccaccgtcgagttctttcaggggaccatcatgaaccccattgaccttcaa
cgggtcaaggttcacgaggcggacgcttgtctggtacttgctaacaagtactgccaggat
ccggacgccgaagacgcggcaaacataatgcgcgtcatctctatcaagaattattccgac
gacatacgcgtcattattcagctaatgcaataccacaacaaggcctatttactcaacatt
ccatcatgggattggaagcagggtgacgacgttatctgcctggccgaactgaagttgggt
ttcattgctcaatcctgcctagcaccaggtttcagcactatgatggccaacctcttcgcc
atgcgctcctttaagacgaaatggttggttgattggaaccagtcgcctgatatgcaggca
tggcagaatgactaccttcgtggaacgggaatggagatgtacaccgagacactgagccca
accttcattggaatgccatttgccaaggccactgagttgtgcttcacgaaattgaagcta
ttgctgctggcaatcgagataaagggggacgccgggaacgatagcaagatttcgatcaat
ccgcgtggggcaaagatcgcggcgaacactcagggattttttattgctcaatcagccgac
gaggtgaagcgagcgtggttttactgcaaggcttgccacgacgacatcaaagatgagact
ttgatcaagaaatgcaaatgcaaaaacttggccacattccggaagggcgtgagggctgtt
cagatggtcggacgagcaagcgaggacttctcgtatgcaaacgaccaccatcctcccccc
acattcactccgccagaactacccaagatggttcacgtgcgaggtgagataagccgagaa
cgagacgatctaaacgcgatgagaaatcatcgaaattcggtcggcatgacgctgatgaac
tcgacgaagcaagtgaacaaggtgaaaccgaacgtgaacagaacgccgaacgatagtttg
tccagtcctaaccagtcgtacaacaaccagagatcgcaagaggaatctgcatactctggt
taccatctcgcctacgaagtcaaaaaactcatgccgacgagccggggctcgggcggtaac
aacgtgaacaacaacgggggtctccaggtcgggatagccgacgaccaggcgaaggacttc
gactttgagaagacggagatgaagtacgactcgaccggaatgttccactggagcccggcg
cgaaacctcgaagactgtatcctggaccggaaccaggcggcgatgacggtgctgaacggg
cacgtagtcgtctgcctcttcgccgatccggactcgcccctgatcggactgagaaaccta
gtaatgccactgagagcttccaattttcactaccacgagcttaaacatgtagttatagtc
ggtgccgttgactatatacggcgggagtggaagatgctgcagaatctccccaagatatcg
gttctgaacggttcgccgctcagcagagcggatctcagggccgtgaatgtcaacctttgc
gacatgtgctgcattctgtcggctaaagtgcctagcaacgatgaccccaccctcgccgac
aaggaggccatcctcgcgtccctcaacatcaaggccatgaccttcgacgacactatcggc
gtactgagtcaagttggcagtccgatagttctacaaagaagaggatccgtctacggcgcc
aacgtgccgatgatcaccgaattggtgaacgacagcaacgtccagtttctcgaccaggac
gacgacgacgatccggacactgaactttacctgacgcagcccttcgcctgcggcacagcc
ttcgcagtcagcgttttggattccctcatgtcaacgacgtacttcaatcagaacgcgttg
acgttgattcgatccctcatcaccggaggggcgactcccgagttggaactgattcttgcc
gaaggtgctgggctcagaggaggatacagcacggcggacagtctttcgaatcgggaccgg
tgcagggtgggtcaaatatcgttgtacgacgggccgttggctcagtacggcgaaggtggc
aagtacggcgacctctttgtcgcggcattaaaatcgtatggaatgctgtgcattggtctg
tacaggtacaggtttcgcgacacgagttcatcctgcgacgcatcttcgaaacgatacgtc
atcaccaatccacctgacgactttactctgttaccaacagatcaggtattcgttctaatg
cagttcgacccgggtctggagtacagaccgagcagaggagcccgagggaaagatgacgcc
tcctga
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