Neodiprion pinetum (white pine sawfly): 124216697
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Entry
124216697 CDS
T08966
Name
(RefSeq) cyclin-H isoform X1
KO
K06634
cyclin H
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03022
Basal transcription factors
npt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124216697
09124 Replication and repair
03420 Nucleotide excision repair
124216697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npt03021
]
124216697
03400 DNA repair and recombination proteins [BR:
npt03400
]
124216697
Transcription machinery [BR:
npt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124216697
DNA repair and recombination proteins [BR:
npt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124216697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
Pox_A_type_inc
Cyclin_C
HopW1-1
Tox-REase-2
Motif
Other DBs
NCBI-GeneID:
124216697
NCBI-ProteinID:
XP_046477489
EnsemblRapid:
LOC124216697
LinkDB
All DBs
Position
4:complement(35617373..35644041)
Genome browser
AA seq
331 aa
AA seq
DB search
MFPMSSQKMYWIFSDENDITELREKTNSEFIDKHGVNVPRDQREEHFLTTSEERILLKFY
ELQLRDFCRRFVPPMPRPTVATALHYFKRFYLRNSVMDYHPKEILVTCVYLGCKVEEFNV
SISQFVANIKGDREKASDIILNNELLLMQQLNYNLTVHNPFRPVEGLMIDIKTRCTALEN
PEKLRPHIDDFLERVFLTDSILIYAPSQIALAATLHAASRAAANLDNYVTDTLFSREHLP
GIIEAVRKIRSMAKCVEPPTREVVRSLEKKLDKCRNQANNPDSEIYKQRMQDMLDEDDLR
DNEKYAKIIQDQAEHDEKVLGVSKSLSPSAL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaatgagctctcaaaagatgtactggatattcagtgatgaaaatgacatcacg
gaacttcgcgagaagactaactcggaattcatcgacaagcatggcgtgaacgtgccgcgc
gatcaaagagaggagcatttcctaacgacttcggaagaacggatattactcaaattctat
gaattacaactccgagacttctgtcgcagatttgttccgcccatgccaagacctaccgta
gcaactgcgcttcactacttcaagaggttctatttaaggaacagcgttatggattaccat
cctaaggaaatccttgtcacgtgcgtctaccttggctgcaaggtagaagaattcaatgtc
tcgatatcccagttcgtagcgaatatcaaaggagacagagaaaaggcatcagacatcatt
ttaaacaacgaattgttactcatgcagcagctcaactataacctgactgtccataatcct
ttcaggcctgtagagggcttgatgatcgatataaagaccagatgcacagcacttgaaaat
ccagagaagctcagaccgcatatcgacgattttcttgaaagagtgtttctcacagatagt
attctgatttacgctccgagtcaaattgctttggctgccaccttgcacgcagcgtcgaga
gctgctgctaatctagacaattacgtaacagacacactgttctcgagggaacatttgcca
ggaatcatcgaggctgttagaaaaataagatcaatggccaagtgtgttgagcctccaaca
agagaagtggtccggtctcttgagaagaaactggacaagtgccgaaatcaagcgaataat
ccagacagcgaaatttacaaacaaagaatgcaggacatgctggacgaggatgatttacgg
gataatgaaaaatacgcaaaaatcattcaagaccaagcagagcatgacgagaaagtattg
ggcgtgagtaaatctctatctccatcggcgttgtag
DBGET
integrated database retrieval system