KEGG   Neodiprion pinetum (white pine sawfly): 124216697
Entry
124216697         CDS       T08966                                 
Name
(RefSeq) cyclin-H isoform X1
  KO
K06634  cyclin H
Organism
npt  Neodiprion pinetum (white pine sawfly)
Pathway
npt03022  Basal transcription factors
npt03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:npt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    124216697
  09124 Replication and repair
   03420 Nucleotide excision repair
    124216697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:npt03021]
    124216697
   03400 DNA repair and recombination proteins [BR:npt03400]
    124216697
Transcription machinery [BR:npt03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     124216697
DNA repair and recombination proteins [BR:npt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     124216697
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB Pox_A_type_inc Cyclin_C HopW1-1 Tox-REase-2
Other DBs
NCBI-GeneID: 124216697
NCBI-ProteinID: XP_046477489
EnsemblRapid: LOC124216697
LinkDB
Position
4:complement(35617373..35644041)
AA seq 331 aa
MFPMSSQKMYWIFSDENDITELREKTNSEFIDKHGVNVPRDQREEHFLTTSEERILLKFY
ELQLRDFCRRFVPPMPRPTVATALHYFKRFYLRNSVMDYHPKEILVTCVYLGCKVEEFNV
SISQFVANIKGDREKASDIILNNELLLMQQLNYNLTVHNPFRPVEGLMIDIKTRCTALEN
PEKLRPHIDDFLERVFLTDSILIYAPSQIALAATLHAASRAAANLDNYVTDTLFSREHLP
GIIEAVRKIRSMAKCVEPPTREVVRSLEKKLDKCRNQANNPDSEIYKQRMQDMLDEDDLR
DNEKYAKIIQDQAEHDEKVLGVSKSLSPSAL
NT seq 996 nt   +upstreamnt  +downstreamnt
atgtttccaatgagctctcaaaagatgtactggatattcagtgatgaaaatgacatcacg
gaacttcgcgagaagactaactcggaattcatcgacaagcatggcgtgaacgtgccgcgc
gatcaaagagaggagcatttcctaacgacttcggaagaacggatattactcaaattctat
gaattacaactccgagacttctgtcgcagatttgttccgcccatgccaagacctaccgta
gcaactgcgcttcactacttcaagaggttctatttaaggaacagcgttatggattaccat
cctaaggaaatccttgtcacgtgcgtctaccttggctgcaaggtagaagaattcaatgtc
tcgatatcccagttcgtagcgaatatcaaaggagacagagaaaaggcatcagacatcatt
ttaaacaacgaattgttactcatgcagcagctcaactataacctgactgtccataatcct
ttcaggcctgtagagggcttgatgatcgatataaagaccagatgcacagcacttgaaaat
ccagagaagctcagaccgcatatcgacgattttcttgaaagagtgtttctcacagatagt
attctgatttacgctccgagtcaaattgctttggctgccaccttgcacgcagcgtcgaga
gctgctgctaatctagacaattacgtaacagacacactgttctcgagggaacatttgcca
ggaatcatcgaggctgttagaaaaataagatcaatggccaagtgtgttgagcctccaaca
agagaagtggtccggtctcttgagaagaaactggacaagtgccgaaatcaagcgaataat
ccagacagcgaaatttacaaacaaagaatgcaggacatgctggacgaggatgatttacgg
gataatgaaaaatacgcaaaaatcattcaagaccaagcagagcatgacgagaaagtattg
ggcgtgagtaaatctctatctccatcggcgttgtag

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