Neodiprion pinetum (white pine sawfly): 124216891
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Entry
124216891 CDS
T08966
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npt03036
]
124216891
Chromosome and associated proteins [BR:
npt03036
]
Eukaryotic type
Meiosis-specific proteins
Others
124216891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
124216891
NCBI-ProteinID:
XP_046477921
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Position
4:complement(2615884..2620688)
Genome browser
AA seq
1099 aa
AA seq
DB search
MNVVDKRKSVNSSRGRGGRQNTRVDRGLEIFPKYQLYGASQQPVLRSNGFNAVNTKMAAL
KTPAKNNRKSSTSSSSVTRSSQRKISTPYNTGVTGSSSTPTTGAGSPFVIAITEGRGDAR
GEVGIAVVNVQHPHLILSQISDRHAYMKTLTKVLLFKPIEIIMPDTMIRKSGTGGNLYEC
IRDKFPGLNIAAVSRQHFSNTDGLDRIRTLCAPEYSSVEIYVKQKFYALAAAGALLKYIE
YTQNILYVEKSMYVEFQSSQDTTVIDIDIDSAQNLELVTYDKNFNKYTLLGMMDRCLTPG
GKRYLRASILQPSCNKRIIEDRQACVSELVEDNPLMISVQSHIRRLCNVDQLLVVGLNSP
QKDNVASAEKYLNYVLSLKTTLEVIPLLHTALRNTKANFFGKVLENLKDKRYDLMMDKIL
EVLQPDAQYVAGFNTSTMQRCFALKSGLNDMLDIARQAYCELIDDMKGMVETLALKYNLP
LILGCSASLGYHIQMDSPKYRPIKITNLPRIFIEVQKHKNSYLMTTEALLVLSQRCKDAC
EELHLMSNVMLKGVLNDIREHISCLYQLSNDIAELDLIVSLARISSLSNYTRPSFGSRTE
LKNSMHPLMDLTGTGVPVPNDVNVSPTHNFNVITGPNMGGKSVYLRQIVMLQIMAQIGCY
VPAEIAEFRITDRIFCRLCFEDSIECNASSFVLEIKETQYILQTVTSNSLVIIDELCRGT
TVEEGETIAFAICEQLLNTSAFVFFTTHFLSLTLLAELYPNVTNYHFGTMCRPVEGSTEQ
RLIYTHKLNPGIIFAKNYGLSLAETSGIRISIVKHARLLVQKSREGTKPVIQSQQIVNIE
GKICYDEVSKIHRLIQDGEFNVKTVLECVRRLENSNISVSEQENSSCNDQNTGSAQSSML
SITERYNRLRQKRLLDTPASDGDLMAQRSFVEPKAGPSNIVTNTNSLGPSPSKKSQVIEM
PHFAICLTEGKIVTDFGKQDLRRLRTYSWKEESKPIRQITSFPNPQNIEPPHSPAPTIKL
DEEPYEFSPQNSYKSESPSIIDLVSQLSTDTIMAKISARRKEAEIFRQIEGENFQEFQFY
NSVLSRTASSVTIKNIKHQ
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgtagataaacgaaaatcggtcaattcatcgagaggaagaggcggtagacag
aatactcgagttgatcgcggacttgaaatatttccgaaatatcagctttatggagcttca
caacaacctgtgctacgatcaaatggattcaatgctgtaaacactaaaatggctgcattg
aaaacaccggccaaaaataatcgtaaatcaagtacatcttcctcgtctgtcactcgcagc
agccagcgaaagatttcgacaccttataataccggcgtcactggaagctcgtcaacacct
acgacaggagcaggttcaccatttgttatcgcgatcactgaaggccgtggagacgccagg
ggggaagtgggtattgctgtggtaaacgtgcagcacccacatctaattctttcccagatc
agcgatcgtcatgcctatatgaaaaccttgacaaaagttctcctcttcaaaccgatcgaa
attatcatgccggatacaatgattaggaagagcgggactggtggaaatctctacgagtgt
ataagggataagtttcccggactcaatatcgctgctgtttctcgacagcatttcagtaat
acagacggcttggatcgcataagaacattatgtgcccccgaatattcttccgtggaaata
tacgtgaagcagaaattctatgcccttgcagccgctggtgctttgctaaagtatatagag
tacacgcagaatattttatacgtggagaagtcaatgtacgtcgagtttcagagttctcaa
gatacaactgttatcgatatagacatagacagtgctcagaacttggaactagtaacatat
gataaaaatttcaacaaatacacgctgctgggtatgatggacagatgcttgactccagga
ggtaaaagatacctgcgagcctcaattttgcagccctcttgtaataagcgtataatcgaa
gatcgccaagcttgtgtctctgaactggttgaggataatccgttaatgatatctgtacag
tctcatataagaagattatgcaacgttgatcagctccttgttgtcggtctgaactcacca
cagaaagataatgtagcaagtgcggaaaaatacttaaactatgtactttcactaaaaact
actttggaagttattcctttgctgcatacagctctccgaaatacaaaggcgaattttttt
ggaaaagtcttggagaatctgaaagataaacggtatgacttgatgatggataagattctg
gaagttctgcaacctgatgcgcaatatgtggcaggtttcaatacctcaaccatgcagcgc
tgctttgctctgaagagcggattaaatgacatgctagatatcgctcggcaagcttactgc
gaactcatagatgacatgaaaggaatggttgagactctggctctgaagtataatttacca
ttgatactaggatgtagcgcttcgctcggatatcatatacagatggattccccgaagtat
agaccaattaaaatcacaaacctaccacgcatatttatagaagtgcaaaagcataagaat
agttatctcatgacaacggaagccttgctagtattgagtcaacgatgtaaagatgcttgc
gaagaactccatctaatgagcaatgttatgctgaaaggagtccttaatgatatcagagaa
catatcagttgtctgtatcagctgagtaatgacatagcagagctcgacctcatagtctca
ctggcacgtataagctcactttccaactataccaggccgtcgtttggctcaagaaccgaa
ttgaaaaattccatgcatccgctgatggatctcactggtactggtgttccggttcctaat
gatgtgaatgtgtcacctacacataatttcaatgtaataactggacctaatatgggaggg
aaatcagtttatttgaggcaaattgtgatgctacagataatggcacagattggatgttat
gtgccagcagaaatagctgagtttcgaataaccgatcgaatcttttgcagactatgtttt
gaagatagcatcgaatgcaatgcatcaagttttgttctggagatcaaggaaacgcagtat
attttacaaacagtaacatccaattcacttgtgataatagacgagctatgcagaggaaca
accgttgaggaaggagaaactattgcgtttgctatttgcgaacaactactgaatacatca
gcatttgtgttcttcactacacactttctaagtttaactctcctagccgaattatatcct
aatgtcacgaactaccattttggaaccatgtgccggcctgtggaaggctctacagagcag
agactgatttacactcacaaactaaaccctggaatcattttcgcgaaaaattatgggctg
tcattagctgagacttctggaattcgtatctcaatagtcaaacacgcacggctgttggtt
caaaagtcaagagaaggaactaaacccgtgatacaaagtcagcaaattgtgaatatagaa
gggaagatatgctacgacgaggtttcaaaaatccaccgccttattcaagatggcgagttc
aatgtgaaaacagttctcgaatgtgttagaagacttgaaaattctaacatttccgtttct
gagcaagagaattcttcatgcaatgaccaaaatacaggctctgcccagagctctatgctt
tctattacagagagatataacagacttcgccagaaaagacttctagacactccggcatca
gatggcgatttaatggcccagagatctttcgtggaaccaaaagcaggaccaagtaatatt
gtaacgaataccaattcactaggcccctcgccaagtaaaaagtctcaagtgattgagatg
cctcattttgcaatctgccttacggaaggaaaaattgtgacagattttggaaaacaagat
ttgcgaagactgaggacatattcctggaaagaagaatcaaaacccatcagacagattact
tcattcccaaacccgcaaaatattgaaccacctcattctccggcaccaacaataaaactt
gatgaagaaccgtacgagttctcacctcaaaattcatacaaaagtgaaagtccgtcaata
atagacctagtatcgcagttatcaaccgatactattatggcgaaaattagtgcgcgtaga
aaggaggcagagatatttagacaaatcgagggcgagaattttcaagaatttcaattttac
aactcggtcctttcacgaactgccagctcagttacaattaaaaatatcaagcatcagtag
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