Neodiprion pinetum (white pine sawfly): 124216943
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Entry
124216943 CDS
T08966
Symbol
atms
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npt03021
]
124216943 (atms)
Transcription machinery [BR:
npt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
124216943 (atms)
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Gene cluster
GFIT
Motif
Pfam:
Paf1
DUF1416
Motif
Other DBs
NCBI-GeneID:
124216943
NCBI-ProteinID:
XP_046478024
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Position
4:35986254..35990728
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AA seq
567 aa
AA seq
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MAPTIQTNSSNDRDKRTARPIEKSGNQMTSGIQSNNNKDAIDKRPRPAENRSELLCRVKY
CNTLPDIPFDPKFITYPFESTRFIQYNPTSLERNYKYEVLTEHDLGVEIDLINRDTYAGD
INAQLDPADEKLLEEDILTPQDSKRSRHHARSVSWLRRTEYISTEQTRFQPQTMDKVEAK
VGYSIKKNFKEETLYMDRESQIKAIEKTFEDNKKLIEKHYSKPNVVPVEILPIYPDFKVW
KYPCAQVIFDSDPAPTGRSVPAQIEEMSQAMIRGVMDESGEQFVAYFLPLEETLEKRRRD
FTAEIDYADDEEYEYKMAREYNWNVKSKASKGYEENYFLVMRQDGVYYNELETRVRLSKR
RQKAGQAPNNTRLVVRHRPLNANEFRMQRYREKQLEPPCEDDEEEEEEEEEEEEGQPQET
EKAEDKAGSDNEGGSRASSRASSRASSKKSRSRSKSRSRSKSRSRSKSGSRSKSRSRSKS
RSRSKSHSKSRSRSGSAQSRSTSKSRSQSRSRSRSKSRSRSRSGSGSPIKSPSQSPSRSK
SRSRSRSGSGSGSGSGSGSSDSGSDSE
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaccattcagacaaatagcagtaacgacagggacaagcgaactgctaggccg
attgagaagagtgggaatcagatgacctctggcattcagtccaacaataataaagatgcc
attgataaacgtcctagaccagctgaaaacaggtctgaattattatgccgtgtaaagtac
tgcaacaccctaccagatattccattcgacccaaagttcatcacatatccatttgaatca
acaagattcatacagtacaatccgacatctctggaacgtaattataaatatgaagtattg
acggagcatgatttgggtgttgagattgacttaataaaccgggacacctatgctggagat
attaacgcccaacttgatcctgcggacgagaaacttctggaagaagacatcctcactcct
caagattcaaaacgttctaggcatcatgcgcggagtgtatcatggctcagacgtacggag
tacatctccaccgaacagacacggtttcaaccccaaactatggacaaggttgaggctaaa
gttggttacagtattaaaaagaatttcaaggaggaaacattatacatggatcgagaaagt
cagataaaagctatagagaaaacatttgaagacaataaaaagctaattgaaaaacattac
agcaaaccaaacgttgtgcctgttgaaatattacctatctatcctgatttcaaggtatgg
aagtacccatgtgctcaggtaatatttgattccgatccagctccgactggtcgatcagta
cctgcgcaaattgaggaaatgtcgcaggcgatgatcagaggtgtgatggacgaaagtggt
gaacaattcgttgcgtacttcttaccactagaggagacattagaaaaacgtcgcagagat
ttcactgcagaaattgactatgccgatgatgaggagtacgagtacaaaatggcaagagag
tataactggaacgttaaaagcaaagcttcaaagggatacgaagagaattacttccttgtc
atgcgtcaggacggggtttactacaatgagctggaaactcgagtacgtcttagcaagcgt
agacagaaggctggtcaggcacctaataacacaagattagttgtgcgccaccgaccattg
aatgccaatgaattcaggatgcaacgttatcgtgagaagcagcttgaaccaccctgtgaa
gatgacgaggaagaggaagaggaagaagaggaagaggaagagggacaaccacaagaaact
gaaaaggctgaagacaaagctggctctgataatgaaggcggttcccgtgcatcgtcgcgt
gcatcgtcgcgagcatccagtaagaagtcacgatctcgttcaaagtcaagatcacgttca
aaatcaagatctcgatcaaaatctggatcgcgttcaaaatctaggtctcgttcaaagtca
cgctcccgttcaaaatctcacagcaagtctaggtctcgttcgggatctgctcaatctaga
agtacttcaaaatcacgatctcagtccagatctcgatcacggtccaagtccagatcccga
tcacggtctggttctggttcgcccattaagtctccatcgcagtcaccgtcaagatctaaa
tcgcgatcaagatcaaggtctggttcaggaagtggcagcgggagtggctcgggtagcagt
gacagtggttccgatagtgagtga
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