Neodiprion pinetum (white pine sawfly): 124216988
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Entry
124216988 CDS
T08966
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124216988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npt03009
]
124216988
Ribosome biogenesis [BR:
npt03009
]
Eukaryotic type
Pre-60S particles
GTPases
124216988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
EFG_IV
GTP_EFTU_D2
MMR_HSR1
SRPRB
Motif
Other DBs
NCBI-GeneID:
124216988
NCBI-ProteinID:
XP_046478136
LinkDB
All DBs
Position
4:19526456..19631351
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AA seq
1045 aa
AA seq
DB search
MRLVSSEKLSMLQRDPDNVRNICILAHVDHGKTTLADSLVASNGIISGKLAGKLRYLDSR
TDEQQRGITMKSSSIALYHTQNGREFIVNLIDSPGHVDFASEVSTAVRLCDGAIVVVDVI
EGVCPQTRSALSIAYIEGLKPILVFNKIDRLITEVKLTPLDAYVHLMQVLEQVNAVMGEL
FASDVMEREEKEEAASSESRNLNERDLADWQSALEEADDSNLYFSPERGNVLFASAVDRW
GFGLKEFAKMFSEKLGFSKNVLLKTLWGDFYINSKTKRIMKGAQEKAKKPLFVQLILENI
WALYDTVVVRKDKDKITSMVDKLQIKLTTRDLRHTDSKAQLQAICSQWLPLAEACLDITC
ANVPSPKNLTNEKIERLMSGNTDFSALPQETQLLKDAFLACDSSPNAPVIVFISKMFPVD
RKTLPENKSKPLTQEELAQRREIARQRHAAQLEQQKSGITAVTEKTEALDLDNIQKPVEE
ISEDALVAFARVYSGTLSEGSEVFVLGPKHNPALALERLKSGEEVDESAVLKDLKPGRHA
TKAKIERLYLLMGRELEPLESVTAGNVVGIGNLEDHVLKTATLSSTIACPSFAELTSLTD
PILRVALEPKHPNDLQKLMKGLKLLNQADACAIVHIQETGEIVLNTAGEVHLERCLEDLK
LRYAKVEVNVSEPIVPLRETVVPPPKVDMTNEVIEKKEQECSLESWTANRQCSFEIDARP
LPDEVTKTLEKYVDLIKLLDRHVERLGKEVEDVNTSTESLVLPERTQKAVDSFKAELKLA
FQEGEEELDLRKIWCFGPKKCGPNMLVNETSYERKPFWERQAKSNDPRAAYDSSIVNGFQ
LATLAGPLCEEPMMGVCFVLKKWELHDTASGDGGSQSQGHLGGQLMSACKEACRRALSLR
RPRLVTPMYSCSVLVNSDVLGKLYAVFGRRQGRVVAADSVSGFGGQFRVLATLPVPESFH
LARELRTQTSGLASPQLVFSHWEVIEQDPYWVPSTEEEYLHFGEKPDSGNRAKRYMDLVR
RRKGLPVDSQLVTHGEKQRTLSKNK
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcgtcagttctgagaagctttccatgctgcagcgcgaccctgacaatgtccgc
aacatctgcatcctggcacatgtcgaccacggcaaaacaacgctggctgactctcttgta
gcaagtaatggaataatatctggtaagcttgccggcaagctgcgataccttgacagcaga
acggacgagcagcaacgcggcataactatgaagtcgagctctatcgctctctaccacact
caaaacggacgtgagttcattgttaatttaatagactcccccggtcatgtagatttcgcc
tctgaagtatcgactgcggtgaggctctgcgacggggcgatagtggtggtcgacgtgatc
gagggcgtctgtccgcagacccgcagtgccctttcgatagcctacatcgaagggttgaag
cccattctagtctttaacaagatagacaggttgataacggaagtgaaattgacgcctcta
gatgcctacgttcacctgatgcaggtattggagcaggtgaacgcggtcatgggtgaactg
tttgcaagcgatgtgatggagcgagaggaaaaggaggaggctgccagcagtgagagccgt
aacctgaacgagagagacctggctgattggcagtcagcattagaggaggcggacgattct
aatttgtacttttcaccggaacgtggaaatgttttatttgccagtgccgttgaccgctgg
ggatttggtctaaaggagtttgccaaaatgttttctgagaagctgggattcagtaagaac
gtactgctcaagacactgtggggggatttttacataaacagtaagaccaagcggataatg
aagggtgctcaagagaaagctaagaagccgcttttcgttcaactcatcctagagaatatt
tgggcactgtatgacaccgtcgtcgtccgcaaagacaaggacaaaataacatccatggtc
gataagctccaaataaaactcaccactcgggaccttaggcacaccgactccaaggctcag
ctacaggcgatttgttcgcagtggctaccactggcggaagcctgcctcgatatcacctgc
gctaatgttccctcacccaagaatctcactaacgaaaagattgaacgacttatgagtggg
aataccgatttctctgcgcttccgcaggagacgcagttgctgaaggatgctttcctggct
tgcgacagctcgccgaacgcgcctgtgatagtgtttatatcgaaaatgtttccagtggac
agaaaaaccctgcctgaaaacaagtccaagcctctgacgcaggaggagctcgctcagagg
cgagaaatcgccagacagcgacacgccgctcaactggagcagcaaaagtcaggaatcact
gcggtaacggaaaagacagaggctttggacttggacaacattcaaaagccagtggaggaa
atatctgaagatgctttggttgcttttgccagagtttattcaggaacgctgagtgaaggt
agcgaggttttcgtccttgggccgaaacacaaccctgcattggctctggagcgcctgaag
agtggagaggaagtcgacgagagcgcggtgttgaaagatctcaagcctggccggcatgcg
accaaggcaaagattgagcggctgtacctcttgatgggacgagaattggagccattggag
agcgtgacagccggtaacgtggtgggaatcggaaatttggaggaccatgtcctgaagacg
gcaactctgtcctccacgatagcttgtccctcttttgctgagctgacgtcattgacggat
ccgattctgagggtggcactggagccgaagcacccgaatgacctccagaagctgatgaag
ggcctgaagctgctaaaccaagcagatgcctgcgctattgtccacattcaggagaccggt
gagatagttttaaacacagcgggcgaagtccaccttgaaagatgtctcgaggatcttaaa
ctgcgctatgccaaggtcgaggtgaacgtttcggagccgatagttccgcttagggagacc
gttgtccctccgcccaaggtcgacatgaccaacgaggtgatagaaaagaaagagcaggag
tgcagtctcgagtcttggaccgctaacaggcaatgcagcttcgaaattgacgcgaggcca
cttccggatgaggtgactaagacgttggagaaatacgtcgatctcatcaagctgctggat
cggcatgtcgagaggcttggcaaggaggtcgaggatgttaacacgtctaccgaatccttg
gttcttccagaacgaacccagaaagccgtcgattctttcaaggctgagcttaaactcgca
tttcaagagggtgaagaggaactggacctcagaaagatttggtgctttggaccgaagaaa
tgtgggccaaatatgcttgtcaatgaaaccagttatgagaggaagccattctgggaacga
caggctaaatctaatgatcctagagctgcgtacgacagcagcatcgtaaatggctttcaa
cttgccacgctggctggacctctttgcgaagaaccaatgatgggcgtatgctttgtgctt
aaaaaatgggagctccacgacaccgcgtctggcgacggaggaagtcaaagtcagggtcac
ttgggaggtcagcttatgtcagcctgcaaggaagcctgtagacgagcactcagcctgcgc
agacctcgactagttaccccgatgtattcttgcagtgtcctggtcaactcggacgttctc
ggcaagctttacgcagtttttggacgaaggcagggaagagttgtggctgcggatagtgtc
tcaggttttggtggtcagtttcgcgttctagccacgttacccgtacccgagagctttcat
ctagctcgagagctccgaacacagacttccggcctcgccagtccgcagctggttttcagt
cattgggaggtgatcgagcaagatccgtactgggtgccgtcgacggaagaggagtacctc
cactttggcgagaaaccagacagcggtaaccgagcgaagcggtacatggacctcgtccga
cgtaggaaaggacttccggtcgactcccagctagttacacacggcgagaagcagcggact
ctttcgaagaataaataa
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integrated database retrieval system