Neodiprion pinetum (white pine sawfly): 124217172
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Entry
124217172 CDS
T08966
Symbol
RfC38
Name
(RefSeq) replication factor C subunit 3 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03030
DNA replication
npt03410
Base excision repair
npt03420
Nucleotide excision repair
npt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124217172 (RfC38)
03410 Base excision repair
124217172 (RfC38)
03420 Nucleotide excision repair
124217172 (RfC38)
03430 Mismatch repair
124217172 (RfC38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npt03032
]
124217172 (RfC38)
03036 Chromosome and associated proteins [BR:
npt03036
]
124217172 (RfC38)
03400 DNA repair and recombination proteins [BR:
npt03400
]
124217172 (RfC38)
DNA replication proteins [BR:
npt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124217172 (RfC38)
DNA Replication Termination Factors
ELG1-RFC complex
124217172 (RfC38)
Chromosome and associated proteins [BR:
npt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124217172 (RfC38)
DNA repair and recombination proteins [BR:
npt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124217172 (RfC38)
Check point factors
HRAD17(Rad24)-RFC complex
124217172 (RfC38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_16
AAA_11
TIP49
Rep_fac_C
RuvB_N
ATPase_2
Motif
Other DBs
NCBI-GeneID:
124217172
NCBI-ProteinID:
XP_046478487
LinkDB
All DBs
Position
4:27186360..27189884
Genome browser
AA seq
355 aa
AA seq
DB search
MSLWVDKYRPTNLGKLDYHIEQATRLVNMVQEGDFPHLLVYGPPGAGKRTRIMGIIKELY
GSGAEKLRMESMNFETPSRKKLEIMTISSNYHIEVNPSDVGMYDRVVVMDLIKTVAQTHQ
LDATGQREFKIVLLTNVDQLTKDAQHALRRTMEKYMATCRIILCANSTSRVLPAIRSRCL
GIRIPAPKINEITTILESICKREGLTVPHELAIRIAEASERNLRRAILMLEACKVQQYPF
TVNQNIAELDWKVYIQNTAKLIIAEQSPKKLLEVRGRLYDLLTHCIPCDLIFKGLLQELV
KNCDLELKTQIATTAAEYEHRMHHGSKAIFHLEAFVARFMAIYKKFMETSLEAFM
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggttgacaaatatcgtcccactaatttgggaaaacttgattatcatatt
gaacaagccacacgtctagtgaacatggtacaagaaggagattttccacatttattagta
tatggacccccaggagctggaaaaagaacacggataatgggaataatcaaagaattatat
ggcagcggtgctgagaaattacgaatggaaagcatgaatttcgagactccgtctcgaaaa
aaacttgaaataatgactatcagcagtaattatcatatcgaagttaatcccagcgatgtg
ggcatgtacgatagggttgttgtgatggacctcataaagaccgtagcccaaacacatcag
cttgatgcaacgggtcaaagagagttcaaaattgttctgctgacgaatgttgatcaatta
acaaaagatgcacaacacgcattacgacgcacaatggaaaaatatatggctacttgcaga
ataatactgtgcgcaaattcaacttcacgtgtcctaccagctattcgatctcgttgtttg
ggcataagaataccagcaccaaagatcaatgaaattacaacgattctggaatcaatctgt
aagcgcgagggactcactgtaccacatgaattagcaatcagaattgctgaagccagtgaa
agaaatttgagaagagctattttaatgcttgaggcctgcaaagttcaacaatatcccttc
actgtgaatcaaaatattgccgaacttgactggaaagtctatattcagaacactgctaag
ttaataatagcggaacagtcacctaagaaactgttggaagttcgcggtagactatatgat
ttactgacacattgcataccttgtgacttgattttcaaagggctgctgcaagaattagtg
aaaaattgtgatcttgagcttaaaactcaaatagccactaccgctgcagagtacgagcac
agaatgcatcatggatcaaaagctatattccacttagaagcatttgtagcaagatttatg
gcaatttataaaaaattcatggaaacctcccttgaagctttcatgtaa
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