Neodiprion pinetum (white pine sawfly): 124217176
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Entry
124217176 CDS
T08966
Symbol
Rrp5
Name
(RefSeq) rRNA biogenesis protein RRP5
KO
K14792
rRNA biogenesis protein RRP5
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npt03009
]
124217176 (Rrp5)
Ribosome biogenesis [BR:
npt03009
]
Eukaryotic type
90S particles
Other 90S particles
124217176 (Rrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
HAT_Syf1_CNRKL1_C
S1
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
OB_RRP5_4th
TPR_14
TPR_19
Spt6_S1
HAT_Syf1_M
ARM_TT21_5th
TPR_6
Motif
Other DBs
NCBI-GeneID:
124217176
NCBI-ProteinID:
XP_046478494
LinkDB
All DBs
Position
4:complement(33185377..33191194)
Genome browser
AA seq
1431 aa
AA seq
DB search
MTLKNFPRGGRKPLKNVHANNELKKKPRSKLRIHKDNFAITNYEDSHTTNILATSADCLN
YTTLTQGMVVLGRIREARDYDLIVSLPGRLIGRLELTDISNSYTKLLQSMISVQDDKPEG
YKPLTELFKPGDYLVCYVKQLHLTEKWRVSLSLEPELINQNLDRTRIIPKSKIVGTVSSI
EEHGYIIDTGVANVRAFLTSKDVDEEKEYFIGQQLFLAIKTVETSESASTLKLSAKEKHS
SKAVSQDTQLLDALVPGTKLVLTIKSVLSNGLQVLYNESNIGYINQIYLDNPLSSYETDE
SVHGTLLYVLPTVKFAYFSLLTEESETEKLNIGDIITNATVMCKEQKGILLELQKKFRGY
IPMRRTEVDFEKINSTFKPKSKHKCRVLNYDCFDRVYICSMEKNILNEEYFTATSFAPGE
LVTAEVTKIDVAYGSVTLKVNKSKGYVPPEHVSDIDKNMIYELKVGQSVKVRALNRDDQR
NRVLFTMKQSLVNSNLPILNNIKDAAVGSQHHGTIVQVKNTGLLIKFFGDLKGWAPPNLL
GCKKTEIKQKFSIGQVVPATIVTIDKKDNKMSLSLIGIQKNPSNKLRVGETVECIITESS
SQGVYVEIHSTCNHKDLETGFLPAAHMSPSLEVASLLAARCTPGDEIIASVFSTTPSIIL
TTTFVPLDELTAFKNLRVGHYLPCSVREIGENSLKVLLPIDNYSELGVVPYIRSSELELI
YVNQVLFGKIISIDENSKKIELQTDLYELWMDSVNQNTEMTNAVDILGFYLRKVKELSNY
DFYQSRPISKVSLGQQVSGIIEKVTEDGLVLRLDNDLHGTVRKDQYKQNFKVGDKVSGII
IWLNYVHEIVEITLKSTVVNYITTHKSDSSSIPLGTKLKGEIILVTNWFILIVLKGQGKG
RLAALPARRHLNDVQPDLRPYFIGGKVNCYVIIEAVESDLLPVCVLSSTFEPRKLSASVK
SEKSLKKRKTDDAPKVNLQSKKAKLDQKDLSKDIDHDIVDESINDNTSTNSRSKTKSKKS
KRKVTTEVERETNVDNEIIQNSSCDNQGMKDSTSGIESKKNKMKESKREETNVNEIPIID
IRQEEKVTDKSLKPDDLSIPACGFYWNTEPTPQEELAVESSSDSDEEAESPQKKKKLSAA
ERREQERQKEREIREREEALASNQLPNSVDQFDRLVMSSPNSSVVWVQYMAYHLQATEIE
KARAVAKRAIKTINFREENEKLNVWQAWLNLESRFGTLESMNEVFQEAVRTNDAFKVYTH
MLTLHANANRQAALDKTITTITGKFKQNPLAWIESGIALLKMRLKDRSRHIMQRALQSLP
AHQHVDLMVRFAQLENKYGDKERAQTLFEKILSSYPKRVDVWSAYVDALIKSADIPIARQ
VLERAAAQTLPARKMKTIFKKYIAFEEHHGTAENVIKVQEMARNYIENQSQ
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atgacgttaaaaaattttccacgcggaggccgcaaacccctaaaaaatgtacacgcaaat
aatgaattgaaaaaaaagccaagatccaaactaagaatccacaaggataattttgccatt
actaattatgaagattcgcataccacaaatatattggcaacatcagcggactgtttgaat
tatactacgttaacacaaggaatggttgtcctgggtcgtattcgagaggccagggattat
gacttgattgtatcgcttcctggacgattaatcggtcgattggagcttacagacatcagc
aattcgtacacaaagttattgcaaagtatgatcagcgtacaagatgacaaacctgagggt
tataaaccactgacagagttattcaaacctggtgactacttggtctgttatgtcaagcaa
ctgcacttgacagagaagtggagagtctctttgtccctggaaccagaactaataaatcaa
aatctggatcgcactcggatcatcccaaaatcgaagattgttggcactgtatccagtatt
gaagaacatggctatatcattgacactggggttgctaatgtcagagcttttttaacttct
aaagatgttgatgaagaaaaagaatactttataggacagcaactctttttggcaattaaa
acggttgaaacgtcggagtcagcatcgacactcaagttatctgcaaaagaaaaacacagc
agcaaagcagtttctcaggatacacagttattagatgctctagtacctggaacaaaattg
gttctcactatcaaaagcgttctgtcaaatggattgcaggtgctgtataatgaaagtaac
atcggttacatcaatcagatttacttggataatccattatcttcgtatgagacagatgaa
tcggtccatggtacgctcttgtatgttctgccaactgtaaaatttgcatatttcagtctg
ttgacggaagaaagtgaaactgaaaaattgaacattggtgatattataacaaacgccaca
gtaatgtgcaaggagcaaaaagggattctcctagaattgcaaaaaaagttcaggggttat
atacccatgcgaagaaccgaagttgacttcgagaagattaattccacatttaaacccaag
tctaaacataagtgtagagtattgaattacgattgcttcgacagagtctatatttgcagt
atggaaaagaatatattgaacgaagaatattttacggctactagttttgctcctggagaa
ctggtgactgcagaagtaacaaaaattgatgtagcttatggatctgtcacattgaaagtt
aataaaagtaaagggtacgtgccccctgaacatgtttctgatattgataagaatatgata
tatgaactcaaagtcggccagtcggtgaaagtaagagctttaaaccgtgacgaccaacga
aatagagttttattcacaatgaagcagtcattagttaatagcaatttaccaatcttaaat
aatattaaggatgcagctgttggttcccagcatcatggcaccattgtgcaagtaaaaaat
actggacttttgataaaatttttcggagacttgaagggctgggcccctccgaatttgctt
ggctgcaaaaaaactgagattaagcagaaattttcgatcggccaagtagttcctgcaaca
attgtgacaatagataaaaaagataataaaatgagcctgagcttgattggcatacagaag
aatcctagtaataaattacgtgttggtgaaactgtcgaatgtatcatcacagaatcttct
tcacaaggagtctacgttgagattcattccacgtgtaatcacaaggatttagaaactgga
tttctgccagctgcgcacatgtcacctagcttggaagtagcgagcttattagctgccaga
tgcactccaggggatgaaataatagcaagtgtgttctccaccactccaagtataattttg
actacaacattcgtaccgctcgatgaattaacagcctttaaaaacctaagagttggacat
tacttaccatgttctgtcagagagataggtgaaaatagtttgaaggtccttttacctatt
gataattacagtgaacttggtgttgttccttacattagatcatctgaattggaattgatt
tatgtcaaccaagtgctgtttggaaaaattatttccattgacgagaatagtaaaaaaatt
gagttgcaaaccgatttatatgaattgtggatggattctgtgaatcaaaatactgaaatg
actaatgcggttgatattttgggcttctacctcagaaaagttaaagagctttcaaattat
gatttttaccaaagtagaccaatatcaaaggttagtttggggcaacaagtatctggtata
attgaaaaagttactgaagacggcctggttttacgtctagacaatgatttacacggtaca
gtgcgcaaagatcagtacaaacagaattttaaagtgggagacaaggtttctggtataatt
atatggttaaattacgtccacgaaattgttgagataacactcaaatccacagtggtaaat
tatatcactactcataaaagtgactcatcttccattcccttgggtacaaaattaaaaggg
gaaataatcttggtcacaaattggttcatccttatcgttttaaaagggcaaggaaaagga
agattagctgctcttccagcccgaagacacctcaacgatgtccaacccgacttacgacct
tactttatcggaggaaaagtgaattgttacgttattatagaagctgttgagtctgacttg
ttaccagtttgcgtcttatcatcgacattcgaaccacgtaagttgagtgcaagtgtgaaa
tctgagaagagtctaaaaaaacgaaaaacagacgatgcacccaaagtaaatttacaaagt
aagaaggcaaaattggatcagaaggatttatccaaagatattgaccatgatattgttgat
gaatccataaatgataatacttcaacaaattcgaggagtaaaacgaaatctaaaaaatcg
aaaaggaaagtaactacggaagttgaacgagaaacaaacgtagataatgaaataattcag
aatagcagctgtgataaccaaggaatgaaggatagcacatctggaattgagtcaaagaaa
aacaaaatgaaggaatccaaaagagaagaaacgaatgtcaatgagataccaattatcgac
ataagacaggaagaaaaagtgaccgataaaagtttgaaaccagatgatctcagtattcct
gcatgtggattttattggaacactgaacctacacctcaggaagaactagccgttgagtca
tcaagcgacagtgatgaagaagcagaaagtccacaaaagaagaaaaaattaagtgctgct
gaacgaagggaacaagaaaggcagaaagagcgcgaaatacgtgagagagaagaggccttg
gcgagtaatcaattgccaaattcagttgaccaatttgacagattagttatgtcaagtccc
aatagttctgtagtctgggtacagtacatggcttatcatttgcaagcgactgaaatagaa
aaggcgcgagcagttgctaagagagctattaagaccattaattttcgagaagagaatgaa
aaactaaatgtttggcaggcttggctgaatttggagtcaagatttggcacactagaatca
atgaatgaggttttccaggaggcagtgagaactaatgacgctttcaaagtatatactcat
atgttaacgttacacgccaatgctaacaggcaagcagcactggataaaacgattacaaca
atcacaggaaagtttaaacaaaatccactagcttggatcgagtctggaattgcattactg
aaaatgaggctcaaagatagatcacggcacatcatgcagagagctttgcagtcgttgcct
gcacaccaacatgttgacttgatggtaagatttgctcagctggaaaacaaatacggagac
aaggagagggcacagacgttatttgagaaaattctaagttcataccccaaacgagtcgat
gtatggtctgcgtatgtggatgccttaatcaaatctgccgacattcccattgcccggcaa
gttttggaaagagcagcagcccaaacgctaccagctagaaaaatgaaaacaatattcaaa
aagtacatcgcatttgaagaacatcatggtacagcggaaaatgtcatcaaagtgcaagaa
atggctcgcaattacattgaaaatcaatctcagtaa
DBGET
integrated database retrieval system
