Neodiprion pinetum (white pine sawfly): 124217186
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Entry
124217186 CDS
T08966
Symbol
Spf45
Name
(RefSeq) splicing factor 45
KO
K12840
splicing factor 45
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124217186 (Spf45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npt03041
]
124217186 (Spf45)
Spliceosome [BR:
npt03041
]
Complex A
U2 snRNP components
U2 related factors
124217186 (Spf45)
Complex B
124217186 (Spf45)
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GFIT
Motif
Pfam:
G-patch
RRM_1
SMN_YG-box
G-patch_2
Motif
Other DBs
NCBI-GeneID:
124217186
NCBI-ProteinID:
XP_046478527
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All DBs
Position
1:29040845..29042921
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AA seq
386 aa
AA seq
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MSLYDDFDKHRTTEKVAGWSSGIKLLQSQLQLKKAATTQPKREQFRKAAAVLAPVIDLKS
KVNRDGEKDEDSQTGNSLTLSGTNNVGVGGEFDWNVVNEYDPMWPNEYEKVVKELRDIRD
REHDQENELRKRRRDTTRFEDPQTSPGSNTMVAPERDEERTPTSRGVGGGAAIAPPPSLQ
EAPDLAPPPPPARPQASNLGYGASSVAAKIMAKYGFKEGQGLGKKEQGMSVALQVEKTSK
RGGRIVGEREQLMPPPPPMVPSPPLPVAPVPQPVVPQEEPSITEIMKSPSKVVLLRNMVG
PGEVDEDLEPEVKDECNTKYGDVSRVMIHEVMDVPAEEAVRIFVEFKRIESAIKAVVDLN
GRFFGGRQVRAGFYSCEKLDTLQLMD
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgtacgatgattttgataagcaccgaacaacagaaaaagtcgcagggtggtca
tcgggtattaaactattacagtcccagctgcaattaaaaaaagcggcaactacacagcca
aaaagagaacagttcagaaaagctgcggcagttttggcacctgtgattgacttgaaatca
aaggttaaccgcgatggcgagaaagacgaagattcacaaacaggaaattctcttaccctt
agtggtacaaataatgtcggagtcggaggcgagtttgattggaacgtagtaaatgaatat
gacccaatgtggccaaacgagtacgaaaaagtcgtcaaggaattacgtgatattcgggac
agagaacacgaccaggaaaatgaattacgcaaacgcagacgcgacactaccagatttgaa
gatccacagacttcccctggcagcaacacaatggtcgcaccagaaagagacgaggaaaga
acaccaacttcgagaggagtgggcggtggcgcagctatagcacctcccccatcccttcaa
gaggcaccagatctagcacctcctccacctccagcacgacctcaggcatcgaatcttggc
tacggtgcttcctccgtagctgcaaagatcatggcaaaatatggcttcaaagaaggccag
ggtcttggtaaaaaggaacagggaatgtctgttgctttacaagtagaaaaaaccagcaaa
cgtggtggtaggatagttggcgaaagagaacaattgatgcctcctccaccacccatggta
ccttcgccaccactacctgtcgcccctgttccacaacctgtggttcctcaggaggagcca
agcattacagagattatgaaatcaccaagcaaggtggtgctcttacgaaatatggttgga
ccaggtgaggtggatgaagatcttgagccagaagtcaaggacgagtgtaacacaaagtat
ggggatgtatcgcgtgttatgattcacgaggtgatggacgtcccggctgaagaggcagtg
cgtatatttgtagagtttaagaggatagaaagtgcgatcaaagctgtagtagacttaaac
ggtcgcttctttggcggaagacaagttagagctggattttattcctgtgaaaaattggac
accttgcaattgatggactaa
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