Neodiprion pinetum (white pine sawfly): 124217415
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Entry
124217415 CDS
T08966
Symbol
Nup98-96
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124217415 (Nup98-96)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npt03019
]
124217415 (Nup98-96)
03036 Chromosome and associated proteins [BR:
npt03036
]
124217415 (Nup98-96)
Messenger RNA biogenesis [BR:
npt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124217415 (Nup98-96)
Chromosome and associated proteins [BR:
npt03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124217415 (Nup98-96)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Tautomerase-like
Motif
Other DBs
NCBI-GeneID:
124217415
NCBI-ProteinID:
XP_046478891
LinkDB
All DBs
Position
4:25191052..25205457
Genome browser
AA seq
1876 aa
AA seq
DB search
MFGQSANTSFGGFGAGTQSSPFSQSPFGKPITTTSFGGTAAPVFGSTNNSLFGAKPAGAT
TGGLFGNTAATPAFGQPATSQSSFGGFSNPNTNTGLFGNQQNANTSLFGTSNPTPAFGQG
TKPAGFGFGSSAGTGLFGQTQQPTQQTAPSLFAPSNTAANTSLFGATTGFAGNNTAGGMS
GTVVKFNPLTGTDTMIKNGVTQTISTRHYCITCMKEYEGKSLEELRLEDYTAGRKGQVQG
TQTTGLFGSAAQPSLFSNTGVNTSTANTGFGATTTGFGGTSQPTANTGLFGKPIAGFGAA
ATTSSAFPFNSTTTTSNPFGANAQAKPFGAAAPTPLFGNANTSQTAATGFGTNNTSAFGS
FGAVQPNQSIGLFNQNKPAFNMPASTASTGFGGFGQNTATNTSGGLFGVKPSGTTGFGTA
PSFGATPAPAFGTGTGFGSTQNTGTSLFNSSFKPAGQPGFSFGATPSTSTGLGVSSGLNL
GTGSLLFGQPKPGGLFSTPGTNTNFNTTGNFGLGSNFGANNNTMGSGLGTMGGGMGTNPA
QQNSGANQVHQQILALVSAPFGDSPLLKNLLPASGKTEDLLKPTNATTRALNSPQYKITT
NNSSPKIKARAVTNAQLSKKSLFEGLEEEDPALQEAFQPRANAKRLVLRPKPISTGDAQS
LDRVATSPTVTESVRVKRDVLENANKENHQQDDIRRPADDRRSSTSWLKSSLQRPAKLPE
DEFEGQPTLFRGSDNLEEGLDNTVAELRPQNKPQSLPQSPKLLAAGDSAVNSPSNIDRSI
LNSSNSSDTSDEQDETAAISQTEQEPNAACITLRRAGYYTIPPLDKLEEYVCGDTCVVPN
FTVGRKGYGNVYFPDLIDIYGLNLDEIVHFRNKEVIIYPDDDQKPPMGQGLNRRAQVTLD
RVWPHDKTLHEPITDPERLSAMNYEGKLRRVSAKHDTRFLEYRPETGSWVFKVDHFSKYG
LSDSDEEDEDIPANADLKKLKAIMKPRVNAAGPVNKQLVPPVTDAKLQKKHSFLKRTSQE
VQDSTLSFQSDTLNETDMALNEFYTNDQENDRSLALSPSAIFARVRGTDSHKLQLMKASF
FDTDDEDIDDGTYKTQLNFLPKSSTKIISSTETMEAMEDDQMVPSGHVPTLRSNLSMQQD
NSFLAKESRIMKDKKLAEVTDISHAKTSRLIQAFPPPIVKPATVVLQFSSEVLPLKESIV
GKLNARCVADIGIQMGRSFRVGWGPDLTLVSLSTQKQAAIVPLHGKFSDLGSYVSGRLSN
DTTSSIVQRLQIVGGGGDDVEHIETFKESIVGHLRIQLNHCILGHEGDCPVVGAGAGPAT
LHAHCNLAQELADSSNSDPLASYTSHVWNLSVALWGNLPDIQSESDEMKHQNVMVRREAL
SEWLENVIMETVLKETPEDDPSDKTILSLLSAHKLEDACKIAREAGDHCSALLMAQLGGP
PSVKELIKQQLAMWQHTEVDTELSPDKLKLFMLVAGEPLICIKNGCVNVCEDLEWKQALG
FHLWYVCPPTASVTDAVSLYESAFDASETESYASAPSPEYQEEDYEAEISNGKKVRDLCF
HLLKLYCSGNHPLEKLLNPLTHTADPLDYRLSWLIQQVLVALGYSHLSSHVAAITHMNFA
AQLETYGLWHWAIFVVLHLEDTGRRRSAVVDLLSRHVELDERSDYMKREEFLREELGIPS
MWINKAKAIKAGAMKRYGEAAWYLIHGEQWNAAHELIIEHLAADAIINENLDYLNSLLSP
LVPTECSSTINGWAHRGQLLWDYMLINEEIEALLAGNTDSTSIGYKLELLQPQLSLLCAK
INQFPCPTAKHRLCQAEIAKRTAHLARNLVLLQSNGKNSTSRILAHLVTQLPLPEDYAQQ
ELRHIVNLYVNEIGAR
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacaatctgctaatacttcatttggagggtttggtgcagggacccagagtagc
ccatttagtcaatctccatttggaaaacccatcacaacaacgagttttggtggtacagca
gcaccagtgttcggcagtaccaacaattctctgttcggcgcaaagcctgcgggagcgacg
acaggcggactatttggcaatacggcagctacacctgcttttggacaaccagccaccagt
cagtcatcatttggaggattcagtaacccaaatacgaacaccggtctctttggtaatcag
caaaatgcaaacaccagtctatttggaacaagcaatcctacccctgcttttggtcaagga
actaaaccagcagggtttggctttgggagttcagctggaacaggattatttggacaaaca
cagcaacctactcaacaaactgcaccgtccctttttgcaccatccaatacagctgcaaat
accagcttatttggagctacaactggatttgctggaaataatactgcaggtgggatgagt
ggtacagtggtgaaatttaaccctcttactggtactgatacaatgataaaaaatggcgtt
acccaaaccatatcaactcgacactattgcattacttgcatgaaggaatacgaaggaaaa
tctctggaggaattgcgtttagaagactacacagcaggtcgtaagggacaagttcaaggg
acacaaaccactggactgtttgggtcagcagcccaaccttcactattttctaacacaggc
gttaacacaagcacagcaaatacaggttttggggcaactacaactggttttggaggaaca
agtcagcccacagcaaacactggtttatttggaaaaccaatagctggttttggagctgca
gccaccacaagtagtgcttttcctttcaactcgacgacaacaacatctaatccatttggt
gcaaatgcgcaagctaaaccctttggggctgcagctcctacaccactttttggcaatgcc
aacacaagtcagacagctgctactggatttggtactaacaatacatctgcattcggttct
ttcggcgctgtacaacctaatcagagtattggactcttcaatcaaaacaagcctgccttc
aatatgcctgcatccacagctagtactgggtttggaggatttggacaaaatactgcaaca
aatactagtgggggtttatttggtgtgaaaccatctggtacaacaggctttggcactgca
ccttcatttggtgctacgcctgctccagctttcggaactggtacaggttttggttcaaca
caaaatacgggaacatcattatttaactcatccttcaaacccgcaggacaacctggattc
tcatttggtgctacaccttcgacatctactggacttggagtaagttctggtctgaatctt
ggtactgggtctttactgtttggacaaccaaaacctggcggtctctttagtactccgggt
accaatacaaacttcaatactactggcaactttggactagggagtaattttggagcgaac
aacaacactatggggtctggattgggaacgatggggggaggaatgggcaccaatccggca
caacaaaattctggagcgaatcaagtccatcagcaaattttagcattggtctcagcacca
tttggcgattcaccgttacttaaaaacttactaccggcctcgggtaaaacggaggacctt
ttgaaaccgacaaatgcaaccactcgagctttgaacagtccacagtataagataactact
aacaatagttcccctaaaataaaagctagagccgtgacgaacgctcaactctctaagaaa
tcactattcgaaggcttagaagaagaagatccagcattacaagaagcttttcaaccgcga
gctaatgcaaaacggctcgttttgcgtccaaaaccaataagtaccggagatgcacagtcg
ctagatcgagttgcaacttcgcctaccgttacagaatcagtaagggttaaaagagatgtg
ttagaaaatgcgaataaagaaaatcatcagcaagatgatattcggcgtcctgctgatgac
agaagatcctctacatcatggttgaaatcaagtttacaaaggccggcaaaattaccagaa
gatgaatttgaaggacaaccaacgctattccgaggatcagataacctagaagaaggtctt
gacaacaccgttgcagagttgaggcctcaaaacaaacctcaaagcttacctcaatcacca
aagctgcttgcagctggtgactcagccgtgaactctccatcaaacattgacaggagcata
ttgaactcttcgaacagctctgacactagtgatgaacaagatgaaactgcggccatttcc
caaacagagcaggaaccaaatgcagcttgcattacgctgcgacgtgctggttattacaca
atcccaccacttgacaagcttgaagaatatgtttgcggagatacttgtgtcgtgcccaat
tttacagtgggtcgtaaaggatacggcaatgtgtatttcccagacctgattgacatttat
ggcttaaatctggatgaaattgttcactttcggaacaaggaggttattatttacccggat
gatgatcaaaagccacccatgggccaagggttgaatcgtagagcgcaagtaactctcgat
cgcgtctggccacatgataagactcttcacgaacctataactgaccctgaacgtttatcg
gctatgaattatgagggaaagcttcgcagagtttcggcaaaacacgataccaggtttcta
gaatatcgtccagaaaccggatcttgggtttttaaggtcgaccacttctcgaaatatgga
ctcagtgattccgatgaagaagatgaagatattcccgcaaatgctgatcttaagaagctc
aaagctatcatgaaaccaagagtaaatgcagcaggaccggtcaataagcaactagttcct
ccagtaactgatgccaaactacaaaaaaagcacagcttccttaaacgcacgagtcaggag
gttcaagattcgaccctaagttttcaatcagatactctaaatgagactgatatggcactg
aatgaattttatacaaatgatcaggagaacgatcgatcattagcactcagtccatctgcc
atttttgcacgcgtcagaggaacggatagccacaaacttcaattgatgaaggccagtttt
tttgatacagatgatgaagatattgatgatggcacctataagactcaattaaacttcctt
ccaaaaagttcaacaaaaataatttcaagcacagaaaccatggaggcgatggaagatgac
caaatggttccttccggccacgtacctacattaagatctaatttaagtatgcagcaagac
aattcatttctggctaaagagtctagaattatgaaagacaaaaaacttgcagaggtgact
gacatttcacatgcgaaaacttcaagactaatccaagcttttcctcctcccattgtgaag
cctgccacagttgtccttcaattctcttcagaagttttacctctcaaagaatctattgtt
ggaaaattaaatgctcgttgtgtagctgatattggtatccaaatgggacgttcttttcgg
gtaggctggggacccgatttgacactggtctctctaagtacacaaaaacaggctgcaata
gttccactacatggtaaatttagtgatctcggatcctacgtgtcaggtcgtttatccaat
gatacaacatcaagcattgtacaaagattgcagattgtaggaggtggcggcgatgatgtg
gagcacattgaaacattcaaggaaagtatagttggacatcttcgtatacaactgaaccat
tgtattcttggtcatgagggagattgcccagtagtaggtgctggtgcaggaccagcaacg
ttacatgctcattgcaatcttgctcaagaattggcggattcgtcaaattcagatcctctg
gcgtcttacacaagtcatgtgtggaacctgagtgtggctctttggggaaatttgccagat
atacaatcagaaagtgatgaaatgaaacaccagaatgtgatggtgaggcgagaagcactc
agtgaatggctggagaatgtgataatggaaacagtactaaaagaaacaccagaagacgat
ccatctgataaaacaatcctgtcattgctttcagcacacaaactggaggacgcttgtaaa
attgcacgagaagcgggtgatcattgttcggcacttcttatggcccaacttggagggcca
ccgagtgtaaaagaactgatcaagcaacaactagctatgtggcaacacactgaagtcgat
acggagctttcgcctgataaactgaagctattcatgcttgtagctggagaacctcttatt
tgtataaaaaatggatgtgtcaatgtttgtgaagatctagaatggaagcaagcattaggt
tttcatttgtggtacgtctgtcctcctaccgcatctgtcaccgacgcagtgagtctttat
gaatctgcttttgatgcatctgaaactgagtcttatgcttcggcgccaagcccagagtac
caagaagaggattacgaggcggaaataagtaatggaaaaaaagtgcgagacctgtgcttc
cacttactaaaattgtactgctccggtaaccatccgctggaaaagttactgaatccgtta
actcacacggcagatccattagattacagactaagctggttgatacaacaagtgcttgtc
gcgcttggttattctcatttatcttcgcacgttgctgcaataacacacatgaactttgct
gcccaattggaaacgtatgggctttggcattgggctatatttgttgtgctacacctggag
gatacgggcagacggcgatcagcagtagttgatcttctatcacgtcatgttgaactggat
gagaggtcagattacatgaaacgagaagaattcttgagagaggagcttggcataccttca
atgtggattaacaaagccaaagccataaaagctggggcaatgaaacggtatggcgaagct
gcttggtatcttattcatggtgaacaatggaatgctgctcatgaactcataatagaacac
ctagctgctgatgcaataataaatgaaaacctggattatttgaattcgttgttaagcccg
ttagtaccaactgaatgcagcagtacaataaatggatgggcacaccgtggtcaactactt
tgggattatatgttaatcaatgaagaaattgaagcattgctagctggaaacacagacagt
accagcattggatacaaacttgaattattacagccacaattgagtcttttgtgtgcaaaa
ataaatcaatttccttgcccaacagccaagcataggttgtgccaagcagagattgcgaaa
agaactgcacatttggccagaaacttggtgttattacaatcaaacgggaagaattcaact
tccaggattcttgcacatttggttacgcagttacccctaccggaagactatgctcagcaa
gagctacgtcacattgtaaatttgtatgttaatgagataggagcccgttag
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