Neodiprion pinetum (white pine sawfly): 124217482
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Entry
124217482 CDS
T08966
Symbol
DNApol-epsilon255
Name
(RefSeq) DNA polymerase epsilon catalytic subunit 1 isoform X1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03030
DNA replication
npt03410
Base excision repair
npt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124217482 (DNApol-epsilon255)
03410 Base excision repair
124217482 (DNApol-epsilon255)
03420 Nucleotide excision repair
124217482 (DNApol-epsilon255)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npt03032
]
124217482 (DNApol-epsilon255)
03400 DNA repair and recombination proteins [BR:
npt03400
]
124217482 (DNApol-epsilon255)
Enzymes [BR:
npt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124217482 (DNApol-epsilon255)
DNA replication proteins [BR:
npt03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
124217482 (DNApol-epsilon255)
DNA repair and recombination proteins [BR:
npt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
124217482 (DNApol-epsilon255)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
DUF5853
Motif
Other DBs
NCBI-GeneID:
124217482
NCBI-ProteinID:
XP_046479124
LinkDB
All DBs
Position
4:complement(6222614..6231427)
Genome browser
AA seq
2266 aa
AA seq
DB search
MFIQNKNKFRTPKAPFNTNQQFGQEPNVPREDSAEGRLRQSIENDRIDELYGFVRVNDSK
ERTGFLLNMHSTEVIEDDKRLVSAVDYYFMEEDGTRFKISLPYNPYFYVLCKKDTLQEVA
TFLQKKYPGFLAKVYPLTKEDLDLPNHLIGLKQKYLKLTFTNMTDLVKVRREIMSAVKKN
KEREKSHTYYTEMLASSLNVRDHNPVKNLTDHMDNILDIREYDVPFHVRVSIDVKVFVGK
WYTVKSRHTEPPIIICRDDIIERPDPIVLAYDIETTKLPLKFPDVNTDQIMMISYMIDGQ
GYLITNREIISKDIESFEYTPKPEFEGFFTIYNEPNEEAVIRKFFAHINDVKPHIFVTYN
GDFFDWPFVETRAAIHNIDMKKKIGFSKNRDGVYTCRPAMHMDCLCWVKRDSYLPVGSQN
LKAVAKAKLRYDPVELDPEEMCRMACEQPHVLANYSVSDAVATYYLYLKYVHPFIFALCT
IIPMEPDEVLRKGSGTLCESLLMVEAFHANIIFPNKQETQLNKLTADGHVLDQETYVGGH
VEALESGVFRADIPCRFKMVPEAFNKLIDGVEKALKHTIEEEEKIPLEKVTNFDEVVEKI
KVKLRALRDQPLRMENPVIYHLDVGAMYPNIILTNRLQPSAMVDETVCAACDYNKLNAVC
QRNMTWMWRGEHTPASLSEFQRIQQQLEIEKFPPLFPGGPQRAFHQLSKEDQAMYEKKRL
TEYCRKAYKKTKITRMEERTQTVCQKENSFYVDTVRAFRDRRYEYKALTKVSKQQVSAAV
AKGDAGEIKSAKNREILYDSLQLAHKCILNSFYGYVMRKGSRWYSMEMGGIVCYTGAHII
KKAREIIEQVGRPLELDTDGIWCVLPASFPDNEIITTTDQKKSKITISYPNAVLNFMVKE
EFTNHAYHDLVDSENLVYEVRSENSIFFEVDGPYLAMVLPASKEEGKKLKKRYAVFNFDG
SLAELKGFEVKRRGELQLVKIFQSSVFESFLKGDTLEKCYASVAKIADHWLEVLYTKGAN
MPDTELFDLISENRSMSRKLEEYGAQKSTSISTAKRLAEFLGDQMVKDAGLACKFIISRK
PEGAPVTERAIPLAIFQSDPNVKRYYLRKWLKDPSIQNADIRDVLDWNYYIERLGSTIQK
IITIPAAMQGVANPVPRVKHPDWLHKKMLEKDDVLKQRRINEMFVIQPKKVATPDSDDES
DSHDENEIRDIEDIAGGSDVFKKPVAMVNKRKRAALQDEHENNLNKSWKEVLGLPPPLGN
TIEEKQAWIQYQKKKWAYQANQRNDRRKSKRSKVTEEISPPASYAGVVRNANTSTMGGFL
RRAQRALFDTPWQIIEIAETTEPGLFRLWALVGQELQQLRLIVPRIFYVNSRKVRPDPTV
EDLWRKCSRILPRSRIVYNLYQYSVPESNYKKHGPELMADLSCPNIEGIYETQMPLQFRA
ILQLGCICVVDRSAAADIKTGTDTFHLNQLQFKSIATQPYLERKQVLKHIFLYHHWSAVG
QKAMWGLFLAPTKRAYIFVLDSVRTNQMPNMNTLYVSERNNLLNSDIQNYVKSLPDEIQF
NVRVETDLKQVQRLVQSALQAYKNEKKGPTLLAIQSPIDISVLSRQMPVLTEFPMVNTHI
QDMENLYSTLDWQRVGAKAMIRHYLKSDQILDLMIQQCRYFHAPIGNLPADPTIFGADLF
YARHLQKHNFVLWCSPTERPDLGGSENDDNRLLTDFEESSSCAANNAGTYSSTCVELDVE
SLAVNTLLQCHRVNDIEGTSTFVAFDNMPQASLQEIVSGGAGITAIPSYDETALCSAAFK
VLKTMVNSWLRDISEYRNVFADYQVIHFYRWLRSPSALLYDPALRRTLHNLMKKLFIQLV
AEFRRLGSIIIFANFNKIILCSKKRLISDALGYVEFVVKSIKNKELFHSIEITYQQCWEY
LIWLDLPNHAGVKGKIPDELRGNQYVPDTEPDEEDDDDGPEIIMNWNLIEYLPEEAACQA
SFNAIVAGYISAVYQHMSESESSDATPRRRKRKNSSLSQTLTAPLGLGALESTAEFAKKI
ISSEMSHKLFQIVQKIHKKLPEKILTREENPYLDFGDAESKKINPALELVKSICKVLSLD
KEVEAEVHILKRNLLRLIGVGNFGDSAEWSDPCVSFTLPEVICKACYHTRDIDLCKDNDR
AFENNRHVWKCPLCETSYDNAEIEFSLIDTLNRKCMGYILQDLQCVKCNQIKRENMNEYC
TCAGQYRTLISKRELVRFAKTAKSIAIKFGMPILAETVQNTHLITS
NT seq
6801 nt
NT seq
+upstream
nt +downstream
nt
atgtttattcaaaataaaaacaagtttcgcacacccaaagcgcctttcaacaccaaccaa
cagttcggtcaagaaccaaacgtaccgagagaggattcagcagagggccgtttacgacag
tcgatagaaaatgatagaatcgatgaattatatggctttgtcagagtcaacgatagtaag
gagcgcacaggttttctgctgaacatgcattctaccgaggtgatagaggatgataagcgt
ttagtaagtgcagtcgactattactttatggaagaggatgggacaagatttaaaatatcc
ctgccgtataatccttatttttacgtgctatgcaaaaaggatactttgcaagaagtggca
acttttttgcaaaaaaagtaccctggatttttggctaaagtttacccattgacaaaagaa
gacttggatctgccgaatcacctaattgggctgaaacagaagtacttgaaactaactttt
actaacatgactgaccttgtcaaagtacggcgtgaaataatgtctgctgttaaaaagaat
aaggaacgtgagaagagccacacatattacacagaaatgttggctagttcattgaatgta
cgtgaccacaaccctgtaaagaatttaaccgaccatatggataacattcttgatattcgt
gagtacgatgtaccttttcacgtaagggtatccatagatgttaaagtgtttgttggaaaa
tggtatacagtaaaatcacgccatactgaaccacctatcatcatatgcagggatgatatt
atcgaaagaccagaccctatagtcttggcatacgatattgagacaactaaattaccttta
aagtttcccgatgtcaatacagatcaaataatgatgatttcgtacatgattgatggtcag
ggatacttgattacgaacagagaaatcatatcgaaagatatagagagctttgagtatact
ccaaaaccagaatttgaaggattttttaccatttataacgagccaaacgaagaggctgtt
atcagaaagttttttgctcacatcaacgatgtcaaaccccatatttttgtcacatataac
ggagacttcttcgattggccttttgttgaaaccagagcagccatacataatatagacatg
aaaaaaaaaattggtttctctaaaaatagagatggagtttatacttgtcgcccagctatg
catatggattgtttatgttgggtaaagagagattcgtaccttcctgtgggatcacaaaac
ttgaaagctgtagctaaagcaaagttgagatatgatccggttgagttggaccctgaagaa
atgtgtagaatggcgtgtgagcagccacacgttctcgccaattattcagtgtcagatgct
gtcgccacttactacctttatttgaaatacgtgcatccttttatttttgcattgtgtact
attatcccaatggaaccagatgaggtcctgaggaaaggatctgggacactttgcgaatcg
ctccttatggttgaagcatttcatgccaatattatatttccaaataagcaagaaacacag
ttgaataaactaacagcagacggacacgtcttggatcaagagacctacgtaggaggtcac
gtcgaagctcttgaatctggtgtatttagagctgacattccatgtcggtttaaaatggtc
ccagaagcgtttaacaaactgattgacggcgtggaaaaagctctgaaacatactatagaa
gaagaagaaaagatacccctagagaaagttacaaattttgacgaagttgtcgagaagatt
aaagtcaaattgagagcactcagggatcagcctctgagaatggagaatccggtgatctat
cacttggacgttggagccatgtatccaaacataattttaaccaatcgtctacagccatcg
gcgatggttgatgaaactgtttgcgctgcctgtgattacaataaattgaatgctgtttgt
caaagaaatatgacttggatgtggagaggagaacacacgccagcaagtctgagcgagttt
caaagaatacagcaacaattggaaatagagaaatttccaccgctgttccccggtggacct
caaagagcttttcatcaactttctaaagaagatcaggcaatgtacgagaagaaacggctg
actgaatattgccgaaaagcttacaagaaaaccaagataacgaggatggaggaaaggaca
caaacagtatgtcagaaagagaattctttctacgtggatacagtcagggcattcagagac
agacgatacgaatataaggctctgacgaaagtttcaaagcaacaagtctccgctgctgta
gctaagggcgatgctggtgaaattaagtctgccaaaaaccgggaaattttgtacgactct
ttacagcttgctcataaatgtatattgaattctttctatggatatgttatgcgaaaagga
tctcgatggtatagtatggaaatgggtggcattgtatgttatactggggctcatattatt
aagaaagctagagagataattgaacaagtaggacgccccttggaactggacactgatggt
atttggtgcgttttacctgcttcttttcctgacaatgaaatcatcacaacaacggatcaa
aagaaatcaaaaatcacaatatcatacccgaatgcagtgctcaatttcatggtcaaggag
gaatttactaatcatgcttatcacgatttggttgactcagaaaatttggtgtatgaggtc
cgaagtgaaaattcgatattcttcgaagttgatggtccttacttagcaatggttttgcca
gcttcaaaagaggaaggaaaaaagctcaagaaacgttacgctgttttcaactttgacggt
tcgctggctgaattgaaaggttttgaagtaaaacgacgaggggagcttcagttggtcaaa
atatttcagtcctctgtatttgaatcgtttctaaaaggtgacaccttggagaaatgttac
gcttcggtggctaaaattgctgatcactggctcgaagttctttataccaagggtgcgaat
atgcctgatacagagttgtttgatctaatttcggaaaatagatctatgtcgcgtaaacta
gaggaatacggtgcacagaaatcaacttcaatttcgacagctaaacgattagctgaattc
ttaggtgatcagatggtcaaggatgcaggtcttgcctgcaaatttatcatatcaagaaaa
cctgagggtgcacctgttacagaaagagccattccgttagccattttccaatctgatcct
aatgttaaaaggtattatttgcgaaagtggcttaaggacccatcgattcaaaatgcagac
ataagagatgtgttagactggaattactacattgaaagattgggaagtacgattcaaaag
atcatcacaatacctgcagcaatgcaaggggttgcaaatcccgttccaagagtaaagcat
cctgactggttgcacaagaagatgctggaaaaggatgacgttcttaaacagagacgtatc
aatgaaatgtttgttatacaaccaaagaaagtcgctactcctgattccgacgatgaatca
gacagtcatgatgaaaatgagattagagatatagaagatatagcaggtggttcagatgtt
ttcaagaagccagtggcgatggtgaataagagaaagagagctgctttgcaagatgaacat
gaaaataatctaaataagagctggaaagaagtcctcggcttacctcctccgttgggaaac
acgatagaagaaaagcaggcctggattcagtatcagaaaaagaaatgggcttatcaggcg
aatcagaggaacgatcgtcggaagtcaaagagaagtaaagtaacggaggaaatctctccg
ccagcaagttacgccggtgtggtaagaaatgctaatactagtacaatgggtgggttccta
cgtcgagcgcaaagggcattgttcgatactccctggcagataattgaaatagcagaaacg
actgaacctggtttgttcaggttgtgggctttagtgggtcaagagctgcaacaactgcgg
ttgatagttcctcgcatattttatgtaaactctcgcaaagtcagaccggatccgactgtg
gaagacctgtggaggaagtgttcaaggatactacctcgttctcgaatcgtatacaatttg
tatcagtactctgtaccggaaagtaactataagaaacacggtccggaacttatggcagat
ctatcatgccccaatatagaaggaatttatgaaactcaaatgccgttacagtttagagct
atattgcaactgggatgtatttgcgtcgtcgatcgatcagcggcagctgacataaagact
ggaacggatacttttcatcttaatcaactgcagttcaaaagcattgccacccaaccgtat
ctcgagcgaaaacaagtactgaaacatatatttttgtaccatcactggtctgctgtcggt
cagaaagcaatgtggggtctttttctagctccgactaaaagggcttacatctttgttctt
gactctgttaggacaaatcaaatgccaaatatgaacacgttgtatgtctctgaaagaaat
aacttactgaatagcgatatacagaactatgtcaagagtttacccgacgagatccagttc
aatgtcagggtcgaaacggacttgaaacaggttcagcgtttggtacaaagcgcgctccag
gcctataaaaacgagaagaaagggccaacattactcgcgattcaatcaccaatcgatatt
tctgtattgtcacggcaaatgccggtcttgactgaattcccaatggttaatacgcacata
caagatatggaaaatttgtacagtactttggactggcaaagagtaggtgcgaaagccatg
attcgccactatctgaagtcggaccaaatccttgacctcatgattcaacagtgccgttac
tttcatgctccaattggcaatctaccggcggatccaacaatatttggtgcagacttattt
tatgccagacacttgcagaaacacaatttcgttttatggtgttcacctactgaaaggccc
gatttaggaggtagcgaaaatgatgataataggttgttaactgattttgaggaaagctcg
agttgcgcggccaacaatgcaggcacttattccagtacttgcgtagagctggatgttgaa
agtttggcagtaaatacactgctccaatgtcatcgtgtcaacgatatagaaggaaccagc
acgtttgtcgcctttgacaatatgcctcaagcttccctgcaggaaatagtctccggagga
gccggaataacggcaattccaagttacgatgagaccgctctttgcagtgcagcattcaag
gttcttaagacgatggtaaattcctggttgcgagacatatcagagtaccgaaacgtgttt
gctgattatcaggtgattcacttctatcgttggctcaggtcacctagtgcgttactatac
gatccggcgctgcgcaggacactccataacttgatgaaaaaattgttcattcaacttgtc
gcggagttcagaaggctcggctcgatcatcatatttgctaactttaataaaatcatttta
tgctcaaaaaagaggctgatatcggatgctctcgggtatgttgaattcgttgtaaagtcc
attaagaataaggaactgtttcacagcatcgaaataacttaccaacagtgttgggagtat
ctgatttggctagatttaccaaatcacgctggcgtgaaggggaagattccggacgagttg
aggggtaaccagtatgttcctgacacagagccggatgaagaggatgacgatgatgggcca
gagataataatgaattggaatctcattgagtatttaccagaagaggcggcgtgccaggca
agcttcaacgcgatcgtagctggatacataagtgcagtttatcagcacatgagtgaaagc
gaatcatccgatgcgacgccaagacgtagaaaaaggaaaaacagcagccttagtcaaacg
ttaactgcaccgcttggacttggagctcttgagagcacagccgagtttgccaagaaaata
atatccagtgaaatgtcgcacaaactgtttcaaatagtgcaaaagattcacaagaaactg
ccggagaagattttaacacgtgaggagaatccctatcttgatttcggcgatgccgaatca
aagaaaattaatccagctctcgaactggtcaaatctatatgcaaggttttatccttggac
aaagaagttgaagcagaagtacatattttaaaaagaaatttattgcgtttaataggagta
gggaatttcggtgacagtgcggaatggagcgatccctgtgtgtccttcactttgcccgaa
gtgatatgcaaagcttgctatcacactcgtgatattgatttatgcaaggataacgatcgc
gcgttcgagaataataggcacgtgtggaaatgtccgctctgtgaaaccagctatgataat
gcggagattgaattttcgcttatagatacgctaaacagaaagtgtatgggatatatactg
caagacttacaatgtgtgaaatgtaatcaaataaaaagagaaaacatgaatgaatattgc
acctgcgcagggcagtacagaactctcatttcgaaacgtgagcttgtaagattcgcgaag
acggccaaatcaatagctattaaatttggaatgcctattctcgcagagactgttcaaaac
actcatctaataacaagttga
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integrated database retrieval system
