Neodiprion pinetum (white pine sawfly): 124217516
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Entry
124217516 CDS
T08966
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124217516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npt03009
]
124217516
Enzymes [BR:
npt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
124217516
Ribosome biogenesis [BR:
npt03009
]
Eukaryotic type
90S particles
Other 90S particles
124217516
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
AAA_30
Motif
Other DBs
NCBI-GeneID:
124217516
NCBI-ProteinID:
XP_046479220
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Position
4:complement(21613743..21615595)
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AA seq
236 aa
AA seq
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MGKKRKHGEDKDEFEFDPMPKHLQIAHIKNQEKRLIVILDEAQLESVKVGNSFELLNCDD
HANMLKKNNREPGSCRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEVNPQTRIPR
TFKRFAGLMVQLLHKFNVRASDGPMKLLKVIKNPVTDHLPVGCRKLAMSFSAKKVQNPRE
LVLAEEPIAIVVGAMAHGQVNPDYAEDTISISNYPLSGALTCSKLCSAFEEVWGII
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagaaaagaaaacatggtgaagataaagacgaatttgagtttgatccgatgcca
aagcatctacaaattgcccacatcaaaaatcaggagaaacgtctcatagtaatactggac
gaagcccagttagaatccgtcaaggtcggtaacagttttgaactactaaactgcgacgat
catgccaatatgttgaagaaaaataaccgagagcctgggagctgtaggccagacataacg
caccaatgtctcctgatgttgatggacagtccgctgaacagagctggcttattacaagtc
tatattcacactgagaaaaatgtcctgattgaagttaatccacaaacaaggatacctagg
acgtttaaacgcttcgctggtctcatggtacaactgctccataagtttaatgtgcgagct
tctgacggcccgatgaaattacttaaagttattaaaaatccagtcacggatcatctgcca
gtgggttgcaggaaacttgcaatgtctttcagcgccaaaaaggtccagaatccgcgtgaa
ctcgtccttgctgaagaaccaattgcgattgttgtaggagccatggcgcacggtcaagtg
aatccggattatgcggaagatacgatatcgataagtaattatcccctttctggggccttg
acttgtagcaaattgtgctcagcatttgaagaagtttgggggattatttag
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