Neodiprion pinetum (white pine sawfly): 124217642
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Entry
124217642 CDS
T08966
Symbol
Nup160
Name
(RefSeq) nuclear pore complex protein Nup160 homolog
KO
K14303
nuclear pore complex protein Nup160
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124217642 (Nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npt03019
]
124217642 (Nup160)
03036 Chromosome and associated proteins [BR:
npt03036
]
124217642 (Nup160)
Messenger RNA biogenesis [BR:
npt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124217642 (Nup160)
Chromosome and associated proteins [BR:
npt03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124217642 (Nup160)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_NUP120_160
Motif
Other DBs
NCBI-GeneID:
124217642
NCBI-ProteinID:
XP_046479494
LinkDB
All DBs
Position
4:39836497..39844190
Genome browser
AA seq
1397 aa
AA seq
DB search
MEFPLGYREVIPDQTLPEKWKEIVINAGGSQSTLQDIKVPERAGGYSYKDSTKHFTRNRF
IYWRISHDVLELVEHSLDVNLANCKVRYKFTDRPLLDGISIHETVNSVVILVVTVSSVHK
LTFPHPDKIHRQEHVLSSHPDLSVPSILNDASKNIVNANTGTTNTSVPHAAASWLTLPQE
EALFALAYSTGNILLIRLDTMTGLTHTTELKQDSIVPRFLSGIATAFRGRNSEGHVPMSL
VLHSYGHEMYLFALCREGNVRMWACSKAQCVAVADIAMDSRVPLQGVQGHILKKTVGVND
NELYLGTFLKFGTGCEFSILKPLQDAGLFKFVRICTLFAPDQHLVDFSFTPTRLWAVWRT
TDMDTVAVTHARLPLNGAQVNSEWETAVLVQPPDRDYIVSDPGTDPRQAYIGYIFHPGQF
PLADITRALSIYRRSNIITDTSLSPAVLKERVCMAVEAQIQAEVMDYELSDDDYLEIANR
CWSKFYSCVIQYYANGTKPVGLLLLPNVYGAVLLKKSAFSLLRPMEALEHLMLCNDKSYV
QRFSTTPVLSQDEDTCQNLITLMSALVLLDNQLTEDLKSGIERELYHLRSPDIIIEDLLC
KQVLETEDPLSDYDFQSELNRKIENTNDISQAMAMLVEALTYDLGQPSKLQLDEVQEASR
ILLNVSHLFSSQLGMSAITESVSQITQLRFSICRNLLILQQLVLKRPEAFDPRSLHSINS
SLAPRTVVLTQAYYAVMWICESTASSSPTQTLLDTSIQHLSLLKLSDSGVNIVQRQQRSL
SLLELFMHSGGAKHAHTLMAHTITDTCGLVPWHESMLTHVTLMAQFVWPISGNFIFPEWL
LSSCQHLLVQEYVRMLSTWCEWNSASRKFIMAVSLLEMGETHKACDQFLGACNGILTDTF
LASTLLDACIVSESSMRVNYFLKVIQLFEHHNAADCIIELAETAITIAEDDNPNLPTLHS
IVFRQHLNLEHHTEAYHWLNSNPDPSRKVDCLRQLVATLFERNKLLELVTFPYVEMYEDL
ERIIEGRARSMDLMENNYYNFLYSFHINKGNMRKAASVMYEQGMRLGQESHSPAIILKQS
RCLLACINALHLVKERYRWIVRPVADQRQSGETDPVKKRSIDGREVLHYKVKKQVEVLEL
KEIKDEYYIVTARLKLAKLSPELQTIARAGPSELVAILSNVGLYTTALHLCDRFSLSKTS
VLENLASQCVTLSYQEDIDAWDWLIHNEIFDKGVSDSNVTNIAWRLLEHLTLKHERDNSS
ELHKAVTKNLLHHGAFLPQWLMSSYKERNAAEILRLILNSGRLLEANAIALEYIGAVLGR
GKEYFGLTTPLVATSPAVWLPLNTLELLLLELEHASKTDPMYIESYEELKETLDYYIETV
IRVSEDMIQMKINSRVV
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggagttccctcttggttacagggaagttatacccgatcaaacattaccggagaagtgg
aaagaaatcgtgataaatgccggcggtagtcaaagtactttacaagatataaaagtccct
gagagagcgggcggatactcttacaaagacagcactaagcattttacaagaaatcgtttc
atctactggcgcatatcccacgacgttcttgaacttgtcgagcacagtctagatgtgaat
cttgccaactgtaaagtaagatacaaatttacggaccggccactcttggatggaatttct
atacatgagacagttaactctgttgtgatattagtggtcactgtatccagtgttcacaaa
ctcacttttccacatccagataaaatacatcgacaggaacatgtattgagctctcacccg
gaccttagtgttccatcaatccttaacgatgcatcgaaaaatattgttaatgccaataca
gggacaacgaacacatcagtgccacatgcagcagcctcatggctgactttacctcaagaa
gaagcattgtttgcgctcgcatacagcactggaaacattttattaatccgtcttgataca
atgactgggcttactcatacaactgaattgaaacaagattcaattgttccccgatttctg
tccggcatcgcgactgcttttagaggccgtaattctgaaggacacgtcccaatgtcgctt
gtcctacattcgtatggtcacgaaatgtaccttttcgctctatgtcgggaaggaaatgtc
aggatgtgggcctgcagtaaagcccagtgtgtggcagttgcagatattgccatggacagc
agagttcctttgcagggagtgcaaggacacattttgaaaaaaacagttggagtcaatgac
aatgaactttatttgggaacatttttaaaatttggaactggatgcgagtttagcatcctt
aaaccactgcaggatgctggactcttcaaatttgtcaggatttgtactttatttgcgcca
gatcaacatttggtcgatttttccttcacaccaactcgactgtgggcagtgtggcgaacg
acagatatggacacagtagccgtgacacatgcaaggctaccattgaatggtgcacaagta
aactctgaatgggaaactgcagtgctagtgcaaccgccagacagagattacatcgtgagt
gatcctggaacagatccaaggcaggcatacattggctatatttttcatcctggtcaattt
ccgttagcggacataactcgtgccttgagcatttatcgacgctctaacattataacagac
acgtcgctgtctcctgcagttctgaaggaacgtgtgtgtatggcagtagaagctcaaatt
caagcagaagtaatggattacgagctttcagatgatgactatttagagatagccaatcgc
tgctggtccaaattctattcctgtgtaattcaatactacgccaatggtacaaaacctgtt
gggttgttgttattaccaaatgtatatggggcagttttgctgaaaaagtcagcgttttcc
ctgttacggccaatggaggcgcttgaacatttaatgttatgcaatgacaaatcatatgtg
caaagattcagtactacaccagtcttgtcccaagatgaagatacttgtcaaaatttaatc
acattgatgtccgcattagttttgctcgacaatcaattgactgaggatttgaaaagtgga
attgaacgcgaactatatcatttacgcagtccagacattattattgaagatttgttatgc
aaacaagtactagagactgaagaccctttatccgattacgattttcaatcggaattaaat
cgtaaaatagagaacaccaatgacatctcacaagcgatggctatgctggtagaagcactg
acttatgatcttggtcaaccaagtaaattgcagctcgatgaggtgcaggaagcctctcga
atcctgctgaatgtcagtcacttgttcagcagccagttaggaatgtcagccataactgaa
agcgtatcgcaaattactcagctcagattttcaatctgtagaaatctgctgatcctacaa
caattagttttgaagcggcctgaagcatttgatccaaggtccttacactccataaattct
tcactggcacctagaacagttgttctaacacaagcgtattatgcagttatgtggatttgt
gaatcaaccgccagttcgtcaccaactcaaactttactagacaccagtattcagcatcta
agccttttaaagctttcagattccggagtaaatattgttcagagacaacagagatcattg
tctcttttagaattgtttatgcatagcggaggtgcaaaacatgcccacactttgatggct
catacgataactgatacgtgtggccttgtaccatggcatgaaagtatgctaacacatgtt
actctgatggctcagttcgtttggccaatatcaggaaattttatttttcccgaatggctt
ttatcaagctgtcagcatttgcttgttcaagagtacgttagaatgttaagtacttggtgc
gaatggaacagtgcctctcgcaaatttatcatggcagtgtctttgcttgaaatgggtgaa
acacacaaggcctgtgatcaattccttggagcgtgcaacgggattttgacagacacattt
ttggccagcaccttactagatgcctgtatagtgtctgaaagtagcatgcgagttaattac
ttcttgaaggtgatccagctgtttgaacatcataatgccgcagattgtataatagagctg
gcagaaactgcaatcacaatagctgaagatgacaacccaaatttgcccacgctccattca
atcgtatttagacaacatctgaatctcgaacatcatacagaagcatatcattggcttaat
tctaacccagatccttcccgaaaagttgactgcttgaggcaactagtagcaacattattt
gagaggaacaaattactggaattagttacatttccttatgtcgagatgtacgaagatctg
gaaagaattattgaaggcagggcacggagtatggatcttatggaaaataattactataat
tttctctatagcttccatataaataagggaaacatgcgaaaagctgcttcagtgatgtac
gaacaaggcatgcgactaggacaggaatcccattctcctgcaattatactaaaacagtct
cgatgtttgttggcttgtatcaatgcactgcatcttgtaaaggaaagatatagatggatt
gtgcgccctgtggctgatcaaaggcaatcaggggaaactgatcccgtaaaaaaacggagt
atagatggcagggaagttttgcattataaagtgaagaaacaagtagaagtgttagaattg
aaagagatcaaagatgagtattacatcgttacagcaagattaaaattagccaaattaagt
ccggagttacaaacaatcgcacgtgctgggccgtccgaacttgtcgcaattttatccaat
gttggtttgtacacgactgctttacacttgtgtgaccgatttagtttatcgaaaacttct
gtacttgaaaatctggcctcacaatgcgtaactctgagctatcaagaagacattgacgct
tgggattggctaatacataacgaaatttttgataaaggtgtatcagattcgaatgtcaca
aatattgcttggagattattggagcatctcacattgaaacacgaacgggataatagcagt
gaattgcacaaagctgttacgaaaaatctactgcatcacggtgcctttcttccacagtgg
ctaatgtcttcttacaaagaacgcaatgcggcagaaattctgagacttattttaaattcc
ggtcgacttttagaagcgaatgcaatagctctcgaatacattggtgctgtgttgggtaga
gggaaagagtattttggtttgacaacaccactggtagctacgtcacctgctgtgtggctt
ccattgaacacattagaattgcttctactagaacttgaacatgctagcaaaacagatccc
atgtatatagagagctacgaagaattgaaagaaaccttagactactacatcgaaacagtt
atcagagtttcagaagatatgatacaaatgaaaataaacagtcgagttgtttaa
DBGET
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