Neodiprion pinetum (white pine sawfly): 124217975
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Entry
124217975 CDS
T08966
Symbol
IntS6
Name
(RefSeq) integrator complex subunit 6 isoform X1
KO
K13143
integrator complex subunit 6
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npt03041
]
124217975 (IntS6)
Spliceosome [BR:
npt03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
124217975 (IntS6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INT_SG_DDX_CT_C
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
124217975
NCBI-ProteinID:
XP_046480184
LinkDB
All DBs
Position
4:24823685..24835030
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AA seq
972 aa
AA seq
DB search
MTIIVFLIDTSASMNQRAYLGGRPTLLDVAKSAVETFVKVRQRSPESRGDRYMLLTFEEP
PQNIKAGWKENLATFMNELKNLQCVGLTTLGAALKHALDVLNINRMQTGIDTYGQGRCPF
YLEPSVIVVITDGGKYTANGGVQQDFVLPMHSPIPGTELTKEPFRWDQRLFSLVLRLSGT
PAVERDTGLVASDSSPIDAMCEVTGGRSYCITSHRMMMQCIDSLVQKVQSGVVINFEKIG
PDPPPLANDAQHPDDDDNEDEMNLLNGTRPQFPPNTMAPGNTAWHSCRRLIYVPRSAQKG
FAVGFWPIPESFWPDLSASSLPPRSAHPNVKFTCTSQEPMVIENLPFDKYELEPSPLTQY
ILARKQPTVCWQVFVANSYKSSEVGHPFGYLKASTNLTCVNLFVMPYNYPVLLPLLEELF
KVHRLKPSNEWRTQFQNYMRTMPTYYASSLRRALTRMGAPTPLAQTLIPDNMDNSLSYSV
LNYLKRLKNQAKIEFEKLCNEVISKQVANANLNKTLVNCNSTTVTEGVRVMPRTPLKKDL
VSHPLLQDKFTGLRDQLNEFGGFVVGLVRNQQQQRGAQSYRNAFDVPRKSLLDQVVRMRA
NFLQPGLLHTKLLDDDYVHSMPVAQMGNYQEYLKRMTPPLREIESAPVRQHMFGNPFKID
KKMMVDEADIDMVGATSSNLKTGSLKRAAPPSDSGGLPATRPPPNKRKPGPIPKDVIVRR
PSYSPVNTPPSSPIPWMDETKNQVVPTANSINISNLSSASGSLNLLSQIVPDKLVNGLAE
IPAMPPFEPMPIEPDVIHSEALPASTRITLNNFDASKCENITEKLDEIKTDQNSLLVNDY
EENPNNLKVENCNDEQLTNHVDEKRETKIEKDKPLPKKELEEIRKHNLSIRESVYKEVRR
RGKNYAALFSHLHQIQGTLDIRLAFVRDVIKESLRFKRRNLATLLEEYLQTIQEDGRTMN
HKVNNNGATKIS
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgactataattgtctttttgatcgacacgtcggcctctatgaatcagagggcctatttg
ggcgggcgccctacgctcttggacgtagccaagagcgcggtggagactttcgttaaggtg
cggcagagatcgccggaaagccgcggggaccgttacatgctgctaacgttcgaagaacct
cctcaaaatatcaaggcaggctggaaggaaaacttggcaacttttatgaacgagttgaaa
aacttacaatgtgttggccttacgaccttgggtgcagctctgaagcacgccttggatgtc
ctcaatatcaaccgtatgcagacaggtatcgatacatatggtcaaggcagatgtccattt
tatttggagccctcagtcatagttgtgatcacggatggtgggaaatatacagctaatgga
ggagtacaacaggattttgtgctacccatgcattcacctatacctggtacagagctaacg
aaagaaccattcagatgggatcagagattgttttctttggtcttgagactatctggtacc
ccagctgtggaacgagatactggacttgtagccagtgattcatcaccgatcgatgctatg
tgtgaagtcactggaggtcgttcgtattgcataacgtcacatagaatgatgatgcagtgc
atagattcactggttcagaaggtccagtctggagttgtaataaactttgaaaaaattggt
ccagatccaccgcctctggcgaacgatgcacagcatccagacgatgatgacaatgaggat
gaaatgaatctattgaatggtactagacctcagttccctccgaatacaatggcgcctggc
aataccgcctggcattcgtgtcgaaggttaatttatgtaccacgatcagcacagaagggc
tttgcggtaggcttttggccaattcccgaaagtttctggcctgatctcagtgccagttct
ttgccgccaaggtctgcacatccaaatgtgaagtttacttgcactagtcaagaaccgatg
gttattgaaaatctgcctttcgacaaatatgaacttgaaccaagtcctctgacacagtat
attcttgcaagaaaacagccgacagtttgttggcaagtttttgtggccaactcttacaag
tcaagcgaagttggacacccgtttggatacctaaaagctagcacaaaccttacctgcgtc
aacttgtttgtcatgccatataattatccagtgctgcttccacttttggaagaacttttt
aaagtgcatcgattaaaaccatcaaatgaatggcgaacccagtttcaaaattacatgagg
actatgcccacgtactacgcatcatcattaagaagagcgctaacacgtatgggtgctcct
actccactggctcagacgttgattccagacaacatggacaattccttgtcatacagtgtt
ttaaactatttaaaacggttaaaaaatcaagctaaaatagagtttgaaaaactttgtaac
gaagtgatttcaaagcaagtggctaatgctaatttaaataaaactttagtgaattgtaac
tcaacaactgtgactgaaggagttcgcgttatgccgcgaacaccattgaagaaagatctg
gtatcacatccattgttgcaagacaaattcacagggctcagagatcagcttaacgagttt
ggtgggttcgtagttggacttgtcagaaatcagcagcagcagcgaggggcacaaagttat
agaaatgcatttgatgttccaagaaaatcactgctggatcaagttgttcggatgcgagcg
aactttctacagcctggattattacatacaaagttattagatgatgattatgtccattca
atgcctgtagcgcaaatgggaaattatcaggaatatcttaaacgaatgactccacctttg
agagagatagaaagcgccccagtgaggcaacacatgtttggtaatcctttcaaaatagac
aaaaaaatgatggtcgacgaggctgacatagacatggttggagctacttcctcgaatttg
aaaacgggaagcttaaagcgagccgcaccaccttcggatagtggaggcctgcctgcaact
aggccccctccaaacaaacggaaaccaggaccaatccctaaagatgttattgtaaggcga
ccatcgtattcccctgtcaacactccgccaagttcgccaataccatggatggatgagacg
aaaaaccaggttgtgcctactgccaattccattaatatatctaacttgtcaagtgcctct
ggtagtctgaatttactatcccaaattgtgccggataaattggtaaatggtttggctgag
attccagcaatgccacctttcgaaccaatgccaattgaaccagacgttatccattctgaa
gctcttcccgcatcaactcgaataacgttaaacaactttgatgcatcaaagtgtgagaat
ataactgagaagctggatgaaataaaaactgatcaaaacagtttactagttaatgattat
gaagaaaatcctaataatctgaaggttgaaaattgcaatgacgaacaacttactaatcat
gttgacgaaaagcgagagaccaagatcgaaaaggataaaccactaccaaagaaagagttg
gaggaaataagaaaacacaatttgtccatcagagaatctgtgtataaagaagtacgaaga
cgaggaaaaaattatgccgcgctattttcgcatttgcaccaaatacaaggaactttagat
atacggctcgcgtttgtacgcgatgttattaaagaatcgttgcggtttaaacgacgtaat
ctagcaacattattagaagaatatcttcaaacgatacaagaagatggccgaacaatgaat
cataaggtgaacaacaatggtgcaacgaaaataagctaa
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