Neodiprion pinetum (white pine sawfly): 124218053
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Entry
124218053 CDS
T08966
Symbol
MED16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16 isoform X1
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npt03021
]
124218053 (MED16)
Transcription machinery [BR:
npt03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
124218053 (MED16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
124218053
NCBI-ProteinID:
XP_046480367
LinkDB
All DBs
Position
4:16603108..16609180
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AA seq
812 aa
AA seq
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MDLIYAVDRKNVKSSLGTERFCDGHSLCSLSSRNVAAFTTTTELDDFNGRTWGSHVYICD
LNMPWHSHKVLSNKTNITALEWDLPGDKLVIADESGSIQLWTFKDHILNDWMLIGSACFP
GEHVLSAAWFHNGKKIGLVAEKKDSIYYNDKFNHLRFAPSVRQFGGRAAEGVLVVSTTGM
VGAVMISKDSPSQVCFATESLGSTRHRITAVDICYGKNGHYLVAVSSGSVALPIRCYRVS
VRKSDEKCYITSQALPSFFLHDSVIQDNMYTKVTHLKFVVREDADSLIVAANGDNGGLVE
VWELREKSQTVHKLFQPKTLESFKTVVWQNQSQYQCKSPVVAVTTTKLAIVTTLPPPSCV
IIALADSSIHYLNRDCLKEIALASLNMPWRQDEPSNKFQRLTLSISHIDISWLGGILLVI
DTQGTLYLYRLLLDGGPSMTLGYACTMLEYCLVTGLDCLDLLLCLRSSMIETLCERLDLS
YNRQLAPIQQFYYVQFLCIKTCLFRMLSAGQSKAADLSSLLMIHSVATAFKSLLRPSALI
SHDKGPAESLAAVITEPITDVDKVMFHLDPKEFTVEPITLQSLQQLIQWVADMALNLLAR
LPEQRTQLKSGGVGIYELLKDYKALNTLRELLVIIRIWGLLRPSCLPVFLRNTDNLDALP
LLFRLLSRLVQLNGENQQQQIDEGLIDECCHLPNQIMIPQLHQASSITAIATPMLFCQNL
PLQLEFGVEPELLVFVPELNPIEGCMHTGQVLDSIRHLYLGKQPLLVKQCSRCGGKAQVQ
NMMRTAAIRAWDQRWARTCRCGGLWRIRRMSQ
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggatcttatttatgctgttgatagaaaaaacgtgaaatctagccttggtaccgagagg
ttttgcgatggacactcgttgtgttcattatccagccgtaatgttgctgcctttacaacc
accactgaattggacgatttcaatggaagaacctggggatctcatgtttatatttgcgac
ctgaatatgccatggcattcgcataaagtattgtcaaataaaaccaacatcactgcccta
gagtgggatttgccaggtgataaattggtcattgccgatgaatcgggaagcattcagtta
tggacctttaaggaccacatactgaatgactggatgctgattgggtctgcgtgctttcct
ggagaacatgttctcagtgccgcctggtttcacaatggcaaaaagatcgggttagtcgca
gaaaagaaagacagcatttactacaatgacaaattcaaccacctgagattcgccccttct
gtaaggcagtttggtgggcgcgcagccgaaggagttttagttgtgtcgactacagggatg
gtcggagctgtaatgatatcaaaagattccccgagccaagtttgttttgcgacagaaagc
ctcggaagtacgcgacacagaataactgccgtagacatttgttacggtaaaaatggacac
tatctagtggcggtgagcagcggcagtgttgcgctaccaattaggtgctacagagtatcc
gttagaaaaagtgatgaaaaatgttacatcacttcgcaggcacttccaagtttttttctg
catgacagcgtcatccaggataatatgtacacaaaagtaactcacttgaaatttgtggtc
cgagaggatgctgattctttaattgttgctgcgaatggagacaatggagggctcgtcgaa
gtctgggagcttagggagaaatctcaaactgtgcataagctttttcaaccaaaaaccctc
gagtcattcaaaactgttgtttggcagaatcagtctcagtaccaatgcaaatctccggtt
gtagctgtaactacaactaaactggcaatcgttacgacgttgccaccacccagctgtgtg
ataattgcgttggcagattcctccatacattacctcaaccgagactgtctgaaagaaatc
gctttggcatctttaaacatgccttggcgacaggatgaaccgagcaataaattccaaagg
cttacactctccatatctcatatcgacatctcatggttaggtggaattcttctcgttatc
gatacccaaggcaccctctatctttacagactacttttagatggcggtccttcgatgaca
ctaggttatgcttgtacaatgctagagtattgcctcgtcactggactcgattgcttggat
ttacttctctgcttaagatcctcgatgattgaaaccctgtgtgaacgccttgacttatcg
tacaacagacaactagccccgatccaacaattctactatgttcagttcctctgcattaaa
acttgtctcttcagaatgctatcagctggtcagtccaaagcagcagatctgtcatctttg
ctgatgatacattcggtagcgacagcatttaagtctctgctaagaccatcagcgctcatt
tctcatgacaaagggccagccgagagtctagcagcagtgattacagaacctattacagat
gtcgataaggtgatgtttcatttggatccgaaggaattcacggtggaaccaatcactcta
caatcgctgcagcaactaattcagtgggtcgccgacatggctctgaatctccttgctcga
ttaccagaacaacgtacacagctcaagtctggcggggttggtatttacgaacttcttaag
gactataaagcattgaacactcttcgcgagctcctcgtaattattcggatatggggctta
ctacgtccgtcatgtttacctgttttccttcgaaacacagacaatctggatgcgttgccg
ctactgttcagattactgtctcgactagttcaactcaatggcgaaaatcagcagcagcaa
attgacgaaggattaatcgacgaatgctgtcacttaccaaaccagataatgataccacaa
ctccaccaagcgagcagcatcaccgccatagcgacacccatgctattttgtcagaatctt
cctcttcagttggaattcggtgtcgaacctgagctattggtgtttgtaccagagttgaat
ccaattgaaggttgcatgcacacaggtcaagtactggacagcattcgtcacttatatcta
ggaaagcagcctcttctggtgaaacaatgctcgaggtgtgggggaaaagctcaagtacaa
aatatgatgagaactgcggctattcgggcttgggatcaaagatgggcacggacctgtaga
tgcggaggactgtggcgaattcgccgaatgtctcagtaa
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