Neodiprion pinetum (white pine sawfly): 124218262
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Entry
124218262 CDS
T08966
Symbol
chb
Name
(RefSeq) CLIP-associating protein 1-A isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npt03036
]
124218262 (chb)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
npt04812
]
124218262 (chb)
Chromosome and associated proteins [BR:
npt03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
124218262 (chb)
Cytoskeleton proteins [BR:
npt04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
124218262 (chb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
TOR1L1_N
HEAT_EF3_N
Cnd1
Vac14_Fab1_bd
Adaptin_N
HEAT_ECM29
MMS19_C
UTP20
SCD
Ipi1_N
MMS19_N
HEAT_Maestro
DUF3384
RICTOR_N
Sec6
DUF3014
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
124218262
NCBI-ProteinID:
XP_046480771
LinkDB
All DBs
Position
4:17589687..17616006
Genome browser
AA seq
1497 aa
AA seq
DB search
MAGNPRDMDAFMPLLSTTDIKKKLNVGNLLITYLGDDDKSIECQDIGLFIDNLVPWLHNG
NPKVCQNGLDALTYLADRMGPDFKPYISTIMQPTIDRLGDSKDTTREKASLLLLKLTNRG
CLTAQQLLDKLHPTFTHKNAKLREEGLVLLTTLLDEYGADEMALSGVISNIVKLLSDPTE
KVRETALNTVAHVYRHVGERLRHDLQKKHNVPQAKWLLLIEKFDQIKAAGDLLPSAMSSK
AMKDEDETDRAIKSAPVKRSTSAVQKRGQFGPAKSVQSTPAPPGSTTSTTKRAPLKYSSS
AKSAAGQAGAIDEESFLNAFEDVPAVKLFSAKDLEEQMKSIKDVVGDDKKDWKQRNESMK
KLRGILIAGGANFDNFTECLKNVQRSFEAACMDLRSQVVKEAAITVAFLSYQLKNKFASF
GECVLPTLINLIPNSAKVMATSGAVAVRFILQHTHSPRYIPIITASMNSKSKDIRRASCE
FLHLILQCWATNVLQRHVAALQEAVKKGIADSDADARAAARKSYWAFQEHFPEQAEVLLK
SLDTSYKRSLMSLSNSGSINSLVGRSTSISPRVPRPTLSAAGSTENLHHGQAGLHGPLRR
TPSLPRSYRQSGIPILQRPTDNHCRITPDARSTSAIDLQAAQRAKARMVYANMYRHKATL
HNDISNQRGKSARPAKSPDPQSAVASPERMARTRTRVAGVSQSQPNSRSGSPSSRLSYAT
YNREGGESLMARPRRLSGQGIRSTGNSREPSPQRFGMERSFGSKLRDRNLHMSPTDRPPT
RPVMAQKMLQQSREAESALADALTFDSIDSYTRTPRGKGDHSDDSETNSICSERSMDSFR
RPSESFSWSGSQQRLYRDLWDQSIPKDIKEIIENCGRKHWGDRKEGLLGLQHFLANGNTL
TATELRKITDIFAKMFMDSYTKVLSLFLDTLNDLIESHSEDLGDWLYVLCARLLNKLGTD
LLGSIQTKIHKTLDVVKEQFPGEQLLPTVLRFLTDPTQTPNSRVKVATLTFISQIADTAV
PSALNSSAASALARLLDWTNDMKSQDVRRHAQNAVIALYNLNTPQVTMILSDLPKPYQEA
ALTLVQNHLRRSSGSSNPVSPGTPPSRMPHSPARTRVETDIDMDDDHLNPEEVYKSLRRT
TAEIQNYGFERLEKATTSKDSGISNMADVEEKMEGLALSNSGRSSSVSSPTQRGRPVTNV
ALNGSSDTITGDAVLPQENNGYKTHEHQKNTVSSPDSTSRGPEVLDNLMKVLQENVGHEA
EKIASLQEFQAYVRDGDVPYLKDNFRKLLRSLLENLGSPHKQVQIEVLQVLTELLKCPEL
TESFSKFIELIVLKVLQAHKFDDPNSEASSGSSRALVKQLEVLRIAEKCAATIVTVLPPD
QIIKLIQMIISTEPYPKNMAGIKMLHKIVEHWGADAIMPHLSKIMPGLIKAYDDRESTVR
KSAVFCMVAIHAAVGEEVLMPHLASLYGSKLKLLNIYIQRAQQANSQPASPRNNNKN
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atggctggcaatccaagagacatggatgccttcatgccactcctgtctaccacggatatt
aaaaagaagttgaatgtcggtaatttgctgatcacgtatctcggcgacgatgataaaagc
atcgagtgccaggacattggactcttcatagacaatctcgtgccttggcttcacaacgga
aatccaaaggtttgtcaaaatggtttggacgctctcacttatcttgccgatcgtatgggc
ccggattttaagccttatatatcaacaatcatgcagcctacaatcgacagattgggagac
agcaaagacacaacgagagaaaaagcatcgcttcttctcctcaagctcacaaatcgaggc
tgtttaacggctcaacaacttttagataaactccatccaacattcactcacaaaaatgcc
aaattgagagaagaaggtctggttctcctgacaacgttgttagacgaatatggcgctgac
gaaatggcactatccggagttatttcaaacatagtcaaacttctgtccgatccgactgaa
aaagttcgggaaactgcgctcaacactgtggcacatgtttacagacacgttggcgaaaga
ttgcggcatgatctacaaaagaagcacaacgtgccacaggcaaaatggctgttactaatc
gagaagtttgatcaaataaaagctgcgggagatttattaccatcagcgatgtcgtcaaag
gcaatgaaagacgaagatgaaacagaccgagcgatcaaatccgctcctgtgaaaagatca
acaagcgccgtgcaaaagcgaggacagtttggacccgccaaatccgtgcaatcaactcca
gctccgcctggtagtacaacgtctacgacgaaaagggcacctctaaaatacagttcatcc
gcaaaatcagcggcaggccaagctggcgctatcgacgaagaatctttcctcaacgcgttt
gaggatgtaccggcagtgaagttattctccgcaaaagatttggaggaacaaatgaagagc
attaaggatgtagtaggtgacgataaaaaagattggaagcagagaaacgagagcatgaag
aaactgcgtggtatattgatagccggtggggctaatttcgacaatttcacagagtgcctg
aagaacgtccaaagatcgtttgaagcagcatgcatggatctgagatcgcaggttgtcaag
gaagcggctataacagttgccttcctgagctatcaactcaaaaataagtttgccagtttt
ggagaatgtgtattgccaacgcttatcaatctcatacccaacagcgccaaggtcatggcg
acttccggcgctgttgctgtacgattcattttgcagcacacccacagtcccagatacata
ccgataattacggccagtatgaacagcaaaagcaaagatatcagaagggcgtcatgcgag
tttcttcacctgatacttcagtgctgggctacgaatgtgcttcagagacatgtagccgct
ttacaagaagccgttaaaaaaggcatcgctgattcagacgccgatgccagagcagcggcg
agaaagtcttactgggcattccaagaacattttccggaacaggctgaggttttgctcaag
agcttggataccagttataaaagatcgctcatgtctctgagtaacagtggcagtatcaac
agtctagttggcagatctaccagcatcagtccaagggttcctagaccgacactcagcgct
gcaggtagtacagaaaacttacaccatggtcaggcaggattgcatggccctctgagaagg
actccgtctttgcctagatcgtatcgtcagtctggaattcctattctacaaagacctact
gataatcattgccgcataacacctgacgccagatcgacaagtgcgatagatctacaagca
gctcaacgagccaaggcgagaatggtttacgcaaacatgtatcgtcataaagcaacgcta
cataatgatattagtaatcagcgaggaaaatcagctcgaccagccaaatctccggatccg
caaagtgctgtcgccagtccggaaagaatggcgagaactagaacacgggttgcaggagtg
tcgcaatctcaacccaacagcagatctggctcaccatcttcgagattgagctacgcgacg
tacaacagggaagggggagagtctcttatggcaagaccgagaagattgtccggacaggga
ataagaagtaccggaaacagcagagaaccgagtccgcagcgttttggaatggaaagaagt
ttcggaagtaaattacgagatcgaaatcttcacatgtctcccaccgacaggcctccgact
aggccggttatggcgcaaaaaatgctccaacaatcgcgagaggcggaatcagctcttgcc
gatgctctaacattcgacagtattgatagttacaccagaactccaagaggcaaaggggat
cacagcgacgacagcgaaaccaacagcatttgctcggagcgcagcatggacagttttcgg
cggccgagcgaatcgttttcatggagcggatcacaacaaagattgtatcgcgatttgtgg
gatcaatctatccctaaggatattaaagaaatcattgaaaattgtggtcgcaagcattgg
ggcgatcgtaaagaaggcctgcttggtcttcagcattttttagcaaatggaaatacgttg
acggcgacggaattgcgaaaaataacggatatctttgcgaaaatgttcatggactcctat
actaaagtgttgagtttattcctggatacgttgaacgatctgatcgagagtcacagcgaa
gatttaggcgattggttatacgtgttgtgcgcccggcttttgaataaacttggaacggat
ttgcttggctcgatacaaactaaaattcacaaaaccttggacgttgtaaaagaacaattc
ccaggagaacaactcttgcctacagtattacgcttcttgactgaccctacacagacacca
aattctcgggtcaaagtagccactctcactttcatatcgcagatcgccgacacggccgta
ccgtcggctttaaatagttccgcagcctcggctctagcaagattgttggattggacaaac
gacatgaagagtcaggatgtcaggaggcacgctcaaaacgcagttatagcactttacaat
ttgaatacacctcaagtgacaatgatactctctgatttaccaaaaccttaccaagaagca
gcattgaccctggtccaaaatcacctcagaagatcatccggatctagtaatccagtttct
cccggcactccgccttcaagaatgcctcattccccagctcgaacaagagttgagactgat
atcgatatggatgacgaccatttaaaccccgaagaggtttacaaatcgttgaggcggaca
acggcagaaattcaaaattacggttttgagcgtcttgagaaagcgacgaccagcaaagat
agtggtatcagtaacatggcagacgtggaagagaaaatggaagggctggcattgtcgaat
tcaggacgctcgtcgtccgtttcttctcctacgcagcgaggcaggcccgtcacgaacgtg
gcattgaacggctcgagtgatacaatcaccggtgatgcagtgctgccgcaggaaaacaac
ggatacaagacacacgaacaccaaaaaaacacggtgtcttcaccagattcaacgagcaga
gggcctgaagtgttggacaacctcatgaaggtacttcaggaaaacgttggtcacgaagca
gagaaaatcgcatctctacaagagtttcaggcgtacgttagagacggtgatgtgccatac
ctaaaagataacttcaggaaattactgaggtcactgctggaaaatcttggcagtccccat
aaacaagtacaaatagaagtacttcaggttcttacagagctactcaagtgccctgaactg
acagagtcgttttcaaaattcatcgaactgatcgttctcaaggttttgcaagctcacaaa
ttcgacgaccccaattctgaagcttcctccggcagcagtcgagccctggtaaagcaatta
gaggtactcagaattgcggagaagtgcgcggcgacaattgtaaccgtactgccgccggat
cagataataaaactgattcaaatgataatatcgactgaaccgtatcctaagaatatggct
ggcattaaaatgcttcacaagatagtcgagcactggggcgcagacgccataatgcctcat
ttatcgaaaatcatgcctggcctgataaaggcttacgacgacagggaaagtaccgtgcgc
aaaagcgcggtcttttgcatggtcgcaattcatgccgcggtaggcgaagaagtcctgatg
cctcatctcgcctcgctatatggaagtaaattgaagctgttgaacatatacatacaacgc
gcgcaacaggctaatagtcagccggcaagcccacgtaacaacaataaaaattaa
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