Neodiprion pinetum (white pine sawfly): 124218461 Help Entry 124218461         CDS       T08966                                  Symbol Setx Name (RefSeq) uncharacterized protein Setx   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism npt  Neodiprion pinetum (white pine sawfly) Brite KEGG Orthology (KO) [BR:npt00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:npt03021]     124218461 (Setx) Enzymes [BR:npt01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      124218461 (Setx)     5.6.2.5  RNA 5'-3' helicase      124218461 (Setx) Transcription machinery [BR:npt03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      124218461 (Setx) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 AAA_12 FHA AAA_19 Viral_helicase1 UvrD-helicase AAA_30 Yop-YscD_cpl SLFN-g3_helicase PIF1 ResIII AAA_25 AAA_16 AAA_22 GTP-bdg_M nSTAND3 UvrD_C_2 Motif Other DBs NCBI-GeneID:  124218461 NCBI-ProteinID:  XP_046480902 LinkDB All DBs Position 5:complement(31818315..31827581) Genome browser AA seq 1826 aa AA seqDB search MDWTLERVNDPRNFVILEKNKQSYSCGRKPDNDIICPSIVVSRQHCLFLRTDNGLAVIDL GSSNGIYVNGRLQDPKVVIELHDKDEIGIGCLETYRENEPMYVYKLCKGNTSLRNLEQFD DVLTQRPLEPAIQFVPQSEPTSVVSSVDKNARCARKRNLSIVNTVELDSGFAAPKIPKIN EEHQIIQDDNAGVSQVKASIVLADISAKQEDESPEVEEIQEIWSTIKKVNPPKPKTDPPN LKLSDPPNPKTDKRKLRINLPKPKSNNPVRPVIPAIETNVGIIDKSNRMTLNLKSNDDQM SSKAVEISIDCKEEVIIEEETPETKQKSVLPEQSEVNDCYAFVPKHCNETIDNVSKPKST KLDSQPSCSAWFKGDVQELDKHQVVHSKTGRKSRSRNKNEDSSKHKKSTEKSAPDDTMDL SNAIKIRSSKSPAKSKETAEKEFNREQQSFYDQTPCATSSPFKLRSVKEEPRTSFSIIDT VELSDDEYDVFPSSQLFDGTGSDDAIDIEDGPPEIKSEYIPDAYDIKEEIIEPDYDEIIV PSDSDDEDNPWLQRLSESQRIKEEPDSPPMDFFDEMKNLNLDLLNAAILADTKVPESKEP ESKKQSSHSEGSIKTLQPISFHDIERELNQENKVDSDSGIFHVSDPLPTSTKEKPSPENE LDKSLRIKQTTPKRPEIIEPLHLPQRRRSSVKDSFTASSKHDDISPSASSSTEGTKLTNC TSRGSKQPPHLTFKQKRQLEIDDKIKQKQYEEEQRRRRVKNKWAKNVPLPLGKRKSLPIS KNEKLEIVNQRKEKLKALANKEKLNSVKPSVERVAPQGKAKISAKNRGEFLISEQQQQTA STSKASSRPSKTLKTKKESKNSTKVAETPSTSITAQSQSSKLASPKKISSQIVPLESSKD KKASVNKVLAQTHEERMEDKRKGVDEVTSSMATVMIDEMIGSDKEVSLNQKENWVPNSLD KKRQKKIRKKVRFDMEATTIKEYPIDSNNTMKKCPGKDALIPKDKLLVPPQQVVNKGQYP TLKEFLFHILAWNPSWLEEQKQLNSEPPVVVVTSWLKEQKNLKSEPPIVDDNGLIPLLTN YNNYNEYYHIMVPLLLLELWHGITKEFESIDQKKRRQTLFCSIVDNSITWEKIPSVNVTL TTMMLEMLANENEIKNQIHPVYGDLVFLELCYRDDDGKLHFSKVFAYITHMHKSLITPLT FFNRELGNYVKQSTHVLTYTVLTRPLKMNLCKRPLRLRCVTYLRSRMRMVQALQSLPRSP LLSSILNPKTESRTNLAQPQKPLQNSLITKDKLNSKQAEAVFKTTESIVRKEAKICLIQG PPGTGKSHVIVNMVMQVLYGDNRFRRKDASLRILLCAPSNAAIDEIVLRLLKRRAQLPKD ERFKMVRVGMTNAMHPRVKEISVEELAKRDVKRTNDSYKFWGQSMDSLEEEERFIEAKIN ALQSELSSMQKVNETQAHYNKLKLANLKARYDVIKNCGQNEGNTDPQYVLKQEREAQNNI LVRANIIACTLSSCYTNIMESAFGDKQLNTSKIVADGKKNNISVCIVDEATQSCEAETLI PLMLGVNTLVLVGDPAQLPATIISQRAKRLGLDQSLFSRIQRAQENLQNNSVIMLDTQYR MVSQISHWPNQFFYGGMLKNAEVNDTRAVLPFHPYRVLNMDTTQSHDRFSNTDEAEFVAN LIHGMINHIDQRKVPKHVSIGVITPYKNQQNLVEAKINERITNTMGNLRGKISIEINTVD SFQGHERDIIVMSCVRTNGIGFLSDPQRLCVALTRAKHCLVLCGNFATFRRDRMWNALLE DAQSRRNYIRLEATARPNEIVAHLVR NT seq 5481 nt NT seq  +upstreamnt  +downstreamnt atggattggacattagagagggttaatgatccgaggaatttcgtaattctcgaaaaaaac aaacaatcgtattcgtgtggtcgaaaaccagacaacgacattatatgtcctagcatcgta gtctccaggcaacactgcctctttctcaggactgacaacggcttggcagttattgattta gggagctctaatgggatttatgtcaacggacgtcttcaggacccaaaggtcgtaatcgag cttcacgataaagatgaaattggcataggttgtttggaaacgtacagggagaatgagccg atgtacgtgtacaaactttgcaagggtaatacgagtttaaggaaccttgaacaatttgat gatgtattgactcaaagacctttggaacctgcgattcaatttgttcctcaatccgaacca acgagcgtggtatcatctgtagacaaaaatgctagatgcgcacggaaacgaaatttatcg attgtaaatactgttgagttggattctggattcgcagctccaaaaatccctaagattaat gaagagcatcagataatacaagacgataatgccggtgtttcccaagtcaaggcaagcatt gttcttgctgacatatcagcaaaacaagaagatgaatcaccggaagtggaagaaattcaa gaaatttggtcgacgattaaaaaagtcaacccgccaaagccaaaaactgacccaccgaat ctaaaattgtctgaccctccaaacccaaaaactgacaaacgaaaactgagaatcaacctt ccaaagccaaaatccaataatcccgttaggccagttattccagcgattgaaactaatgtc ggtattatagacaagtcaaaccgtatgaccctaaatctcaaaagtaatgacgatcaaatg tcttcgaaagcagttgaaataagcattgattgcaaggaggaggtaataattgaggaagag actccagaaacaaaacaaaaatctgtgctacctgagcagagtgaagtaaacgactgctat gcctttgtgccaaaacactgcaacgaaactatagataatgtgtctaaaccaaagagtacc aaactagattcgcagccttcctgttctgcctggttcaaaggcgatgttcaagagcttgat aaacaccaagtggtacacagtaaaacgggtcgaaaaagtcgatcgagaaacaagaacgaa gatagctcaaagcacaaaaaatccacggagaaatcagcgccagacgatactatggatctc tctaacgcgataaaaataagatcctcaaagtcacctgcaaagtcgaaggaaacagcagag aaggagttcaaccgggagcaacaatcgttctatgatcagactccatgtgccacttcatcc ccgttcaaattaaggtctgttaaggaagagccgaggaccagtttctcgattattgacact gtggagttgagcgatgacgaatacgacgttttcccaagctctcagttgttcgatgggact ggaagcgacgatgcaatagacattgaagatggtcctccagagataaagtcggagtatatt ccagatgcgtatgacatcaaagaggaaatcattgagcctgactatgatgaaataatagtg ccgtcagatagcgacgacgaggacaacccctggcttcaaaggctatcggagagccagagg ataaaagaagagccggatagtccgccaatggatttttttgacgaaatgaaaaatctaaat ctggatttattaaatgcagcaatattagccgatactaaagttcccgaaagcaaagaacca gaatcaaagaaacagagcagccactctgagggatcaattaaaacattgcagccaataagt ttccatgatatcgagagagaacttaatcaagagaacaaagttgattcggacagcggcatc tttcacgtttctgacccgttgcccacttcgaccaaagaaaaaccgagccctgagaacgag cttgataaatctctgcggataaaacagaccactccaaaacgtcccgaaattatcgagcca ttgcatttaccacagcgaagacgctccagtgtcaaagactcttttacagcatccagcaaa cacgacgacatttcaccttcggcctcaagtagcacagaaggtaccaaactgactaattgc actagcaggggatccaagcagcccccacatttgacatttaaacagaaacgtcaactagaa atagacgacaagataaaacagaagcaatacgaggaggagcaaaggcggagaagggtcaag aataaatgggcgaaaaatgttccactgcctctaggaaaaaggaagagtttaccaatatct aagaatgagaagttagagattgtcaatcaacgaaaggagaagctaaaggcgttggctaat aaggaaaaattgaattcggtaaaaccttcggttgagcgagttgctcctcaaggcaaagct aaaatcagtgctaagaacagaggtgaattcttgatcagtgaacaacagcaacaaaccgcc tcaacttcgaaagcctcttcgcgaccaagtaagactttgaagaccaagaaggaatcgaag aacagtacaaaggttgcggagactccgtcaacttcaataactgcgcaatctcagtccagc aaattggcgagtcctaaaaaaatttccagccaaatcgtgccactggagtcgagtaaggat aagaaggcgtctgtaaataaggttttagcacagacacatgaagaacgaatggaagataag agaaaaggtgttgatgaagtcaccagttcaatggccacggttatgattgacgaaatgatt ggatcagacaaggaagtatcactaaatcagaaggagaactgggtcccaaattcgttggat aaaaaacggcagaaaaagattaggaagaaagttagattcgacatggaagctacgacaatt aaggaatatccgatcgactctaataatactatgaagaaatgtcctggaaaagacgcactt atacccaaagataaattgttggttccacctcaacaagtcgtcaataagggacaatatcct acattgaaggaatttttattccacatattagcatggaatccttcgtggctggaggaacaa aaacaactgaattctgagccgccggttgttgtcgtgacttcatggcttaaagaacagaaa aatttaaaatctgaaccgccgatcgttgacgacaatgggttgataccgttgctgacaaat tataacaattacaatgaatactatcacattatggtgccgcttctactcctcgaactgtgg cacggaatcactaaagaattcgaaagtatcgaccaaaagaagagacgtcaaacactgttt tgttcaatcgtcgacaattcgataacatgggaaaaaattccatcagttaatgtgacatta accacaatgatgctagagatgttggccaacgaaaatgaaataaaaaaccaaatacatcct gtttacggcgatcttgtgtttttggaattatgctatcgtgatgacgatggtaaacttcat ttctcaaaggttttcgcctacataacgcacatgcacaaatccttaattacgccacttacg ttttttaatcgtgagctcggcaattatgtgaaacaatcaacacacgttcttacttacacg gtactcactagaccgttaaaaatgaacctctgtaaaagaccgttacgattaaggtgcgta acttatctgcgatctagaatgagaatggttcaagctctgcagtcattacccaggtcgcct cttctttcctcaatactcaatccaaagactgaatcccgaacgaatttggctcagccccaa aaaccactccaaaactctctgatcaccaaggacaagctgaattccaagcaggcagaagca gtgttcaaaacgacagaatcaatcgttcgtaaagaggccaaaatctgtttgattcaagga cctccaggaacgggcaaatcgcatgttatcgttaacatggtgatgcaggtgctgtacggt gataataggttcagaagaaaagatgcaagcttgagaattctgctctgcgctccgtcaaat gctgccatcgatgaaatagtacttcgccttttaaaacgccgggcacagctacctaaagat gaacgattcaagatggttcgcgtcggaatgaccaacgccatgcatccaagagtcaaagaa atatctgttgaagagttggccaaacgagatgtgaagaggacaaacgacagttataaattt tggggtcagtcaatggatagccttgaagaagaggaaaggtttatagaggctaaaatcaac gccttacagtcagagttgtccagtatgcaaaaggtcaatgaaactcaagcccactacaac aagttaaaacttgcaaatttgaaagcaagatatgatgttataaagaattgtggtcaaaac gaaggtaacacggaccctcaatatgtattgaaacaagaacgagaagctcaaaacaacatt ttagttcgtgcaaacataattgcctgtacgttgtcatcctgttacactaacataatggaa tctgcatttggtgacaaacaattgaatacatccaaaattgttgctgatggtaaaaaaaac aatatatcagtatgtatcgtggacgaagcaacgcagagctgtgaagcagaaacgttgatt ccgctaatgctaggagtgaatactttagtcttggttggagacccggctcaacttcctgca acgataatttctcagagagcgaaaaggcttggcctcgatcagtctttattttcgcgaatt caaagagctcaagagaatctgcaaaacaactcggttatcatgctagatacccagtacaga atggttagccagatatcgcattggcccaatcagtttttctacggtggaatgctgaagaat gctgaggtgaacgatacccgagccgtacttccatttcatccatatagagtactaaacatg gacactacgcaaagtcacgataggttttcgaacaccgatgaggcggaatttgtcgccaat ctcatacacggtatgatcaaccacatcgatcagagaaaagtaccgaaacatgtatccata ggtgtaataaccccctacaaaaaccagcaaaatttagtggaagctaagataaacgagagg atcacaaacaccatggggaaccttaggggtaaaataagcatcgagataaatacggttgat agtttccaaggacacgaacgcgacattatcgtgatgtcctgcgttaggacaaacggaatc ggatttctgtcggatcctcagcgactctgcgtcgctttgacaagagcaaaacactgtctc gtattatgcggaaatttcgcaacattcaggagagacagaatgtggaatgctttgttggaa gatgctcagtcccgaagaaattacataagactcgaagctaccgcgcgtccaaacgaaata gtagcgcatctagtcagatga

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