KEGG   Neodiprion pinetum (white pine sawfly): 124218588
Entry
124218588         CDS       T08966                                 
Symbol
Lis-1
Name
(RefSeq) lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
npt  Neodiprion pinetum (white pine sawfly)
Pathway
npt00565  Ether lipid metabolism
npt01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:npt00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    124218588 (Lis-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:npt03036]
    124218588 (Lis-1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:npt04147]
    124218588 (Lis-1)
Chromosome and associated proteins [BR:npt03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    124218588 (Lis-1)
Exosome [BR:npt04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124218588 (Lis-1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_SCAP Beta-prop_EML NBCH_WD40 Beta-prop_Nup120_160 LisH_PAC1 WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_DCAF4 eIF2A Beta-prop_SPT8 LisH Beta-prop_IFT140_1st Beta-prop_RIG_1st Beta-prop_WDR75_2nd Beta-prop_WDR11_2nd Nucleoporin_N Beta-prop_NUP159_NUP214 Pox_A_type_inc SutA-RBD
Other DBs
NCBI-GeneID: 124218588
NCBI-ProteinID: XP_046481140
LinkDB
Position
5:complement(3105790..3112854)
AA seq 410 aa
MKMVLSQRQREELNKAIADYLSSNGYQDALEAFKKEADMPGEVERKYGGLLEKKWTSVIR
LQKKVMELESKLSEAEKEFIEGAPTRGKRSPTEWIPRPPEKFCLSGHRAPVNRVIFHPVF
SLMVSASEDATLKVWDFESGEFERTLKGHTDSVQDIAFDTTGKLLVSCSADMSIKLWDFQ
QSFACIKTMHGHDHNVSSVAFMPQGDFIVSASRDKTIKMWEVATGYCVKTLAGHREWVRM
ARVSPCGELIASCSNDQTVRVWHVATKETKVELRDHDHVVECIAWAPETSRGAINAAAGA
DNKGAHEGPFLASGSRDKTIRVWDVGAGVCLFTLQGHDNWVRGIVFHPGGKYIVSASDDK
TLRVWDTRNKRSMKTLEAHMHFCTSVDFHKSHPYVVSGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgaaaatggtcttgtctcaacgtcagcgggaggagttaaacaaggcgattgcagactat
ctgagtagcaatggatatcaagatgccctggaagcgttcaagaaggaagctgacatgcct
ggtgaggtggagcggaaatacggtgggttgctcgagaagaagtggacttcagtcataaga
ctacaaaaaaaggtcatggaactcgagtcgaaactatcagaggcagaaaaagaatttatt
gagggagcgcctactaggggtaagagatcaccgaccgaatggattccgaggccacctgaa
aagttctgtctctctgggcatagggcgcctgtaaacagagtaattttccacccagtattc
agccttatggtttctgccagtgaagacgccacgctaaaggtctgggatttcgaaagcgga
gaatttgagcgaacactcaaaggccacacggacagtgttcaagatattgcattcgatact
actggaaagctcttggtatcctgcagcgctgacatgtcaatcaagctgtgggactttcaa
cagtcatttgcctgcatcaagacgatgcacgggcatgaccataacgttagttcggtagca
ttcatgccgcaaggagactttattgtcagcgcgtcacgggacaagaccataaaaatgtgg
gaggttgctactggttattgtgtaaaaacgcttgcggggcacagggaatgggtccgtatg
gcacgggtgagtccttgcggtgaactgattgcaagctgctcaaacgaccagactgtcagg
gtatggcacgttgcaactaaagaaaccaaggtcgaactgagggaccacgatcatgttgtg
gaatgtatcgcgtgggccccggaaacatcgcgtggagcgatcaacgctgcagctggagca
gacaataaaggggcacacgagggacccttcctggcatctggatcccgagacaagacaata
cgcgtgtgggacgttggggctggggtatgtctattcactctccaagggcatgataactgg
gtacgtggaatagtgttccacccaggtggtaaatatatagtcagtgcatcagacgataag
acgctgcgggtatgggacacccgcaacaaacggtcaatgaagacgcttgaggcacacatg
cacttctgcacgtccgttgattttcacaagagccatccatacgtggtaagcggtagcgtg
gatcagacggtaaaggtttgggaatgccgctag

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