KEGG   Neodiprion pinetum (white pine sawfly): 124218734
Entry
124218734         CDS       T08966                                 
Symbol
U3-55K
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
npt  Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:npt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:npt03009]
    124218734 (U3-55K)
Ribosome biogenesis [BR:npt03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    124218734 (U3-55K)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_SCAP NBCH_WD40 Beta-prop_IP5PC_F Beta-prop_HPS5 Beta-prop_DCAF12 WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_IFT122_1st Cytochrom_D1 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Lactonase WD40_like Beta-prop_NUP159_NUP214 PROPPIN
Other DBs
NCBI-GeneID: 124218734
NCBI-ProteinID: XP_046481443
LinkDB
Position
5:29824631..29827558
AA seq 469 aa
MSFFIRNSRGGGPPKRKINGKVGKKTSEGPPFKSKKKDIKKSTPEDDESIASSDEEFAEE
REKKNHVEEESDVEEDETAQEKRLRLARKYLEEIEREEKDRADFEEGAVAKRLQEEYLED
KGRLRKTVAKNYTGHEEPIMLRCKDQKSSITCLCLSSDGKSVYSGSKDGTVVKWSLNDKK
KLKIIKGKRKGTEGMKYVRCLAISTDGKFLVAGDNGSKEVKVYSGDELTHIKNLQGHRDR
VSGLIFRRDTHTLYSASDDRSVKVWNLDDMAYVESMFGHQNGITSIDALSRERAITSGGY
DGTIRIWKIVEESQLIFNGHSGSIDAVKLINEENFLSCGDDGQLCVWGSMKKKPLCSVPE
AHGKDEENGRPMWISSIATFLNTDLVASASISGSRDGVIRLWQCGESFRSLTMLLEIKVV
GFVNSLAFTPDGKSLVAGIGQEHKLGRWWRVPEGKNSIVVIPLIRKDGK
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgtccttttttataagaaatagtcgaggtggtggtccacccaaaagaaagatcaatggg
aaagttggcaaaaaaacctccgaaggtcctccctttaaatcaaaaaagaaagatataaag
aagtcgacgccagaagacgatgagagcattgcgagcagcgatgaagaatttgcagaggaa
agagagaagaaaaatcatgtagaagaagaatctgacgtagaagaagatgagacggcacaa
gaaaaacgtttacggcttgccagaaaatatttggaagagattgagagagaagaaaaagat
agggcagattttgaggaaggtgcagtggctaaacgactacaggaagaatatttagaggat
aaaggtcgtttgagaaaaactgttgcaaagaattacactggacatgaagaacctattatg
ttacgatgtaaagaccaaaaaagttcaataacgtgtctctgcctttccagtgatgggaaa
tccgtttattccggttccaaggatggaacagttgtaaaatggtcattaaatgataaaaaa
aagctcaaaataatcaagggcaaaaggaaagggacagaaggaatgaaatatgtacgatgc
ttagccataagtaccgacggtaaatttttagttgccggtgataatggctctaaagaagtc
aaggtctactctggtgacgaattgacgcacattaaaaatcttcaaggacacagagacaga
gtcagtggactgatattcagaagggatacacatactctgtattctgcctctgatgaccgc
agcgtgaaggtctggaatttggacgacatggcctacgttgagtcaatgtttggacatcaa
aacggaataacatcgatagacgcgctttcgcgtgaacgcgctataacgagtggaggttac
gacggaacaattaggatatggaaaatagtggaagaatcgcaactgattttcaatggtcat
tccggtagtatagacgcggtaaaattaatcaatgaggaaaatttcttgagctgcggtgac
gacggccaactctgtgtctggggatcgatgaaaaagaaacctctatgttcagtgcccgaa
gcccacggaaaagacgaagaaaacggaagacctatgtggatctctagcatagccactttc
ctcaatactgatctcgttgcatccgcttctatttcagggtccagagacggagttatcaga
ctatggcagtgtggagaatcgttcagaagcttaacaatgctattggagataaaagtcgtg
ggtttcgtcaattctctggcattcacaccagacggaaagtctcttgtcgctggaattggt
caggagcacaaactaggaaggtggtggcgagtgccagagggaaaaaatagcatagttgtt
ataccgttaataagaaaagatggaaaatga

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