Neodiprion pinetum (white pine sawfly): 124218773
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Entry
124218773 CDS
T08966
Symbol
EF1a-F2
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124218773 (EF1a-F2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npt03019
]
124218773 (EF1a-F2)
03016 Transfer RNA biogenesis [BR:
npt03016
]
124218773 (EF1a-F2)
03012 Translation factors [BR:
npt03012
]
124218773 (EF1a-F2)
04131 Membrane trafficking [BR:
npt04131
]
124218773 (EF1a-F2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npt04147
]
124218773 (EF1a-F2)
Messenger RNA biogenesis [BR:
npt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
124218773 (EF1a-F2)
Transfer RNA biogenesis [BR:
npt03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
124218773 (EF1a-F2)
Translation factors [BR:
npt03012
]
Eukaryotic type
Elongation factors
124218773 (EF1a-F2)
Membrane trafficking [BR:
npt04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
124218773 (EF1a-F2)
Exosome [BR:
npt04147
]
Exosomal proteins
Proteins found in most exosomes
124218773 (EF1a-F2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
124218773
NCBI-ProteinID:
XP_046481545
LinkDB
All DBs
Position
5:complement(20615179..20619972)
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEARFEEIKKEVSSYIKK
IGYTPAAVAFVPISGWHGDNMLEPSSKMPWFKGWAVERKEGKADGKCLIEALDAILPPSR
PTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGTVVTFAPAGLTTEVKSVEMHHEALT
EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPV
LDCHTAHIACKFAEIKEKCDRRTGKTTEENPKAIKSGDAAIVTLVPSKPMCVEAFQEFPP
LGRFAVRDMRQTVAVGVIKAVSFKDATGKVTKAAEKAQKKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaaggttcacatcaatatcgttgtcatcggacacgtagattccggtaaa
tcgaccaccactggtcaccttatctacaagtgcggtggtatcgacaaacgtaccatcgaa
aagtttgagaaggaagctcaggagatgggtaaaggttccttcaagtacgcatgggtcttg
gacaagctgaaagccgaacgtgaacgtggtatcacgattgatatcgccctttggaaattt
gaaactgccaagtactatgtgactatcatcgatgctccgggacacagagatttcattaag
aacatgatcactggtacgtctcaggccgactgtgcagtgttgattgtggctgctggtacg
ggagaattcgaagctggtatttccaagaacggtcagacccgtgagcacgcactacttgcc
ttcaccctcggcgtcaagcaactcatcgttggtgtcaataaaatggactccactgagccg
ccatactcggaggctcgtttcgaggaaattaagaaggaagtttcctcctatatcaagaag
attggttacaccccagctgctgtcgctttcgttcccatctcagggtggcacggagacaac
atgctcgagccctcgagcaagatgccatggttcaagggatgggccgtcgaacgcaaggaa
ggcaaagctgatggaaagtgtctcattgaggcactcgatgccatcctcccacccagcaga
cctaccgataaggctctgcgtcttcccctgcaggacgtttacaagattggaggtattgga
acggtgcccgtaggccgtgtagaaactggagttctgaagccaggtaccgtcgtaaccttt
gctccagcaggtctcacgactgaagtaaaatccgtcgagatgcaccacgaggctttgact
gaagccgtgcccggcgacaacgttggtttcaacgtaaagaacgtttccgtcaaggaactt
cgtcgtggatacgttgccggtgactctaagaacaatccgcccaagggcgccgccgatttc
accgctcaggtaatcgtgttgaaccaccccggtcagatcagcaacggttatacgccagtg
ttggactgtcacacggcacatatagcgtgcaagttcgccgagattaaggagaaatgcgac
cgacgtacgggtaaaacgactgaggagaatccaaaggcgataaagtcgggagacgcggcc
atcgtgactctggtgccgagcaagccgatgtgcgtcgaagccttccaagaattcccgcca
ttggggcgcttcgctgtgcgtgacatgcgtcagactgtcgctgtcggtgttatcaaggca
gtcagcttcaaggatgccacaggcaaagtcaccaaggccgccgagaaggcacagaagaag
aaataa
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