Neodiprion pinetum (white pine sawfly): 124218826
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Entry
124218826 CDS
T08966
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124218826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npt03000
]
124218826
Transcription factors [BR:
npt03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
124218826
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
TPR_22
ORC6_2nd
Motif
Other DBs
NCBI-GeneID:
124218826
NCBI-ProteinID:
XP_046481637
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All DBs
Position
5:7866963..7875384
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AA seq
1045 aa
AA seq
DB search
MGQSDDVEDSTYSRHQDLCQKLNMDATAASEAWKSYETIRQNYTLEGDQLHWIGCALYVA
CRKSSTPTVGRTGPNVEGNCVSLTRLLHLCNLSLIQFFTKSKNWADMANMPQDFRSKIDK
LERNFTVSMLIFKKYQPIFTDIFKNPADDVARPSRSRRQRAMPCTPSRVFEFCWTLFVCI
KGAFPDISHDLVNLNHLLLACCDLIYSNALLANRRDLLNPKFAGLPANYNNDDYVPPETA
NCIISLLCETREGIAVEAKVIKEYYLKDHINKLFNDKVLRGDQSNFSGILEPLNFDGNSK
AVNKAYEQHVLSVGDFDERKFLAEWRRVRLNRISANEMLSRDITFRGKIPRHYKLKDADA
SDNIGSPTLINNAGDFHEKFTLKHEQYGGQMQHLAPPTPLTGRKYLRSKDVANVTLLSTA
TQGVCRLQALLAGRKPAPSDTLKEILNSCTQDTEATIEARVNEIGEQFYRNYTQNTEDSD
TTNVDFGRKRLQLAQTLFYKLLETILSDEKRKNPNFDIMNLVSQEIFHQCLFACCLEIVI
YSYKSHRSFPWILTAVNVEPYYFYKVIEIIVRSEDQLSRDIVKHLNVIEEKILETLAWKS
ESPLWVAIENTKGGVPSYEEVSLPGTLHLDTVDPNTPGQPVLRRLALDRGNHHDVQQSPI
SSASERFQSPVAVTGLAKKRLFSEGRLSGQQSVLRVGSGQSVLQSKLSSVEGDQKLQLAP
NQITVLKTACPIGTNTPLQQISVNKESAKARRMGSVALFFRKFYHLAWVRMNDLCTKLEL
IDTDLKKKIWTIFEYSVKDQTELMKDRHLDQILMCAVYVICKIAKLDRNSFTEIMRCYRL
QPQAESHIYRSVLIAKVGANYMNDRELEICDDNMDENNGDAPPTPTCMAGTSQNFGTQIR
GDLIKFYNTVYVPQVKEFANKFTSRGGSTNLTLSPLPKSKSTIQSPVRRVTNSVMTRTLD
PKAITASPAPQLSYCFSRSPAKDLEAINRMMISVDARKSVGKRLLADDTTVDMNAAEQSP
AKKTTTPFVARKLENIIGERRTQSQ
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggggcagtcggacgatgttgaagattctacgtacagtaggcatcaagatttatgccaa
aaactcaatatggacgcgacagcagcttctgaagcttggaaatcgtacgagactattcga
cagaattacactcttgagggagatcaactgcattggataggctgtgcattgtacgttgcg
tgtcgaaagtcatcgacaccaacggttggtcgaacaggcccaaacgtcgaggggaactgc
gtgtcattgacacgtcttcttcatttgtgtaatttgtcactgatacaatttttcacaaag
agtaaaaactgggcagacatggcaaatatgccgcaagattttagatctaaaattgacaaa
cttgagaggaattttactgtctcgatgcttatcttcaaaaagtaccaacccattttcacg
gacatattcaaaaatccagctgatgatgtcgctagaccctccagatctaggaggcagaga
gcaatgccatgtacaccatcgagagtttttgagttttgttggacactgtttgtatgcata
aagggagctttccctgatatatcacatgatttggtcaatttaaatcatttacttcttgcc
tgctgcgatctgatttatagcaacgcactgttggccaacaggagagatctgctcaatcca
aaatttgctggtttacctgcgaattacaacaacgatgactacgtacctccggagacagca
aactgtattataagtttactgtgtgagactcgtgaaggtatcgctgtggaggctaaagtg
attaaagaatattacttgaaggatcacataaataagttgttcaatgacaaggttctgcgt
ggagatcaatcaaacttctcaggtatcctggagccgttaaattttgacggcaacagcaaa
gccgtcaacaaagcatacgaacagcacgttcttagtgtcggtgattttgacgaaagaaaa
tttttggccgaatggagacgagtgagactgaatagaatctcggccaacgagatgcttagc
agagatattacattccgcggtaaaatacccaggcactacaagcttaaagatgccgacgcc
agtgacaatattgggtcaccgacattaattaataacgcaggagatttccatgagaaattt
acacttaagcatgaacaatatggtggtcaaatgcagcatttagcacctccaactccactg
actggccgcaagtacctgcgatccaaagatgtagcgaatgtaacattactatcaacagca
acacaaggcgtttgtcgtttacaagcgctcttagctggtcgtaagccggcaccaagcgat
actcttaaagaaatactaaatagttgtacacaggataccgaagcgacaatcgaagcaagg
gtcaatgaaattggtgaacaattctatcgtaattacacccaaaatacggaagacagtgac
accacaaatgtggattttggtagaaaacgacttcaactagcacagactttattctacaaa
ctattggaaacaattttatctgatgaaaaacgtaaaaaccccaattttgacattatgaac
ctagtgtcgcaagaaatatttcaccagtgtctcttcgcctgctgtttggagattgtgatc
tattcttataaaagtcatagatcattcccatggattttaactgccgtcaatgtggagcca
tactacttctacaaagtaatcgaaattattgtaagatcagaagatcagttgtcacgtgac
atagtgaagcacttgaatgtgattgaggaaaagatactagaaactctagcttggaaaagt
gaaagtcccttatgggtagcaattgaaaacaccaaaggaggcgtaccaagctatgaggaa
gtttctttacccgggactttacatttggatacagtagatcctaatacacctggacaacct
gttttgagacgcttggcattggatagaggtaaccatcatgatgttcagcaaagcccaatt
tcctctgcttctgaaagatttcaatcaccagtggcagttacaggcttagctaagaaaaga
ttattctcagaaggtagacttagcggtcaacagagtgttcttagagtcggctctgggcaa
agtgtgttgcaaagtaaactatcgtctgttgaaggtgatcagaaattgcagttggctccg
aatcagataacagttttaaaaacagcgtgtccaatcggcacgaatactcccttacaacaa
atttcggtaaataaggaatcagcaaaggcaaggcgaatgggttcggtagccttgtttttc
aggaaattttatcaccttgcttgggtccgaatgaatgacttatgcacaaaattggaatta
attgatacagatttgaaaaagaagatatggacaatatttgaatattctgtaaaagatcaa
acggaacttatgaaggatagacatttagatcaaatattaatgtgcgctgtatacgtaatc
tgtaaaatagcaaagctcgacagaaattcattcacagagatcatgcgatgctacagattg
cagccacaagcagagtctcacatttatagatctgttctcattgctaaggttggtgcaaac
tatatgaatgacagagaattagaaatttgtgatgataatatggatgaaaataacggtgat
gctccacccactcctacttgtatggctggcacgtctcaaaattttggtactcagatacga
ggagatttgatcaaattttacaacacggtttacgtaccacaagtgaaagaattcgcaaat
aaatttacgtccagaggcggatctacgaatttaactttgagtcctttaccaaagagtaaa
tcaacaatacagtcacccgtcagacgtgtcacgaacagtgttatgacaagaacactggac
ccaaaagctatcacagcctcacctgctcctcagctaagctattgtttcagccgcagtcct
gccaaggatctggaagcaatcaaccgaatgatgatatctgttgatgcaaggaaatctgtt
ggaaaacgccttctagctgatgatacaactgttgatatgaatgcagcagaacaatctcct
gctaagaaaacgacgaccccttttgttgccagaaaattggagaatataataggtgaacgc
cgcacgcaaagccagtaa
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