Neodiprion pinetum (white pine sawfly): 124219009
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Entry
124219009 CDS
T08966
Symbol
Rpn13
Name
(RefSeq) proteasomal ubiquitin receptor ADRM1 homolog isoform X1
KO
K06691
26S proteasome regulatory subunit N13
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
124219009 (Rpn13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
npt03051
]
124219009 (Rpn13)
Proteasome [BR:
npt03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
124219009 (Rpn13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rpn13_ADRM1_Pru
RPN13_C
Motif
Other DBs
NCBI-GeneID:
124219009
NCBI-ProteinID:
XP_046482009
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All DBs
Position
5:complement(18983227..18993376)
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AA seq
408 aa
AA seq
DB search
MSSGALFGSNATRGASKNLVEFKAGKMTVKGKMVYPDTRKGLLYVFQSDDSLMHFCWKDR
TSGVVEDDLIIFPDDCEFKHVPQCKTGRVYHLRFKSSSRKFLFWLQDLKTDKDEEYSRKI
NEVLNNPPTPPTPRIGGGTPDGDLQNLLNNMSQQQLMQLFGGVGQIGGLSSLLGTMTRPS
TGQSSTRASTNSSSTPMTTSATRPPAAQTPAPAAITETPRPSSNSRSSTRTAPASTPAVG
STPNNPIQLSDLQSFLSGIPTPAGTEPPVVQRGVASELTSSIPGAIAPTDKLESEMSAHL
PVGDSLCTTLSSPQFSQALSMFWSALQSGQAGPVVRQFGLGNEAVAAAATGNLEEFVTAL
ETEAKTTGQTQQQQKQDDKSKKQPPQGGGGNSSGKKDDDDDDEGMALD
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcggtgccctattcggtagcaacgcgacacgcggcgcgagcaaaaatctggta
gaatttaaagccggcaaaatgaccgtcaagggcaaaatggtttatccagacactcgcaag
ggtcttctctacgtctttcagtcagacgattccctgatgcatttttgctggaaggacaga
acctccggagtcgtcgaggacgacttgatcatctttccagatgactgcgagttcaaacat
gtaccccagtgcaagacaggcagagtgtatcatcttcgcttcaaatcgtccagcaggaaa
ttccttttctggctccaggatcttaaaacggacaaggacgaagaatattcaagaaagatc
aacgaggtactgaacaatcctccaacgccgccgacaccacgtatcggaggaggaactccg
gatggagatcttcaaaacctgttgaacaacatgtctcagcagcagttgatgcaacttttt
ggaggtgtcgggcaaattgggggactgagcagccttcttggtacgatgaccaggccatcg
accggtcagagtagcaccagagcttcaacgaattcgtcttccactcccatgacgacaagc
gcgacgcgacctccagctgctcaaacacctgcacctgctgcaatcacagaaactccgaga
ccgtcgagcaatagcaggtcttcgacaagaacagcacctgcatccacacctgcggtagga
tcgactccaaataatccaatccagctcagtgatctgcagagttttctctccggaatacct
acaccagcaggaaccgagcctccagtagttcagaggggcgtagcgagcgagctgacgagt
tccatccctggtgcgatagctccgacggataaattggagagtgagatgagcgctcacttg
ccggttggggacagcttgtgcacgacgctatcttcccctcagttctcccaggcgctatca
atgttctggtctgctttgcagtcaggtcaggccggccctgtcgtccgtcagtttggcctg
ggcaacgaggctgtcgcagctgcagcaaccggaaacttggaagagtttgtcactgccctc
gaaactgaagcaaaaaccacaggccaaacccaacagcagcagaagcaggacgacaagagc
aaaaaacagccaccgcaaggcggcggaggcaattcctcgggcaagaaggacgatgacgat
gacgacgaaggaatggcgctagattaa
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