Neodiprion pinetum (white pine sawfly): 124219054
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Entry
124219054 CDS
T08966
Symbol
Usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 homolog isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124219054 (Usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
npt01002
]
124219054 (Usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npt04131
]
124219054 (Usp30)
04121 Ubiquitin system [BR:
npt04121
]
124219054 (Usp30)
Enzymes [BR:
npt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124219054 (Usp30)
Peptidases and inhibitors [BR:
npt01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124219054 (Usp30)
Membrane trafficking [BR:
npt04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
124219054 (Usp30)
Ubiquitin system [BR:
npt04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124219054 (Usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
124219054
NCBI-ProteinID:
XP_046482128
LinkDB
All DBs
Position
5:2048110..2052103
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AA seq
482 aa
AA seq
DB search
MDVEKIAMVAGVGFALVIGAFVLWGPSPRPRRRGQIIGLTNLGYTCFMNALLQSLAACPM
FVGWLRTQLVNNENGQFARSLLSILDKVNGFCDEMIYGDVTPIEIITSLGPLWIFTPGHQ
DAHELFHVVLGALQAEMQPLNRKGCLSDALPKTDIPVTSDIRGSGDPFGMRTSVSCNDIT
RKDEARESDVHNTCLPDQMTASTKSIPKAFGSSIDGAKPGMIIARSSEVISRDGEGENSK
AAFPFRAWNSLCTIPGPSIPAMSNVTHPFSGLLTSQLQCTNCNWKSSVHYDKFESVSLPL
PPASNTLAWRRHTLAELLSRFVTSEVIHDVQCDGCGLRCPAVKTLTLGKLPKCLCLHIPR
TTWGPSGAPVKRDDPIIFPEILILDPFTFTEAKKRNSQGKPQAMIGMLDQNSGIGRNRNR
YKLQSVVEHRGPVDAGHFVSYRRGNRPGQWMYTSDVTVECTTLTDVLCASPYLLFYERIN
GS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgagaaaattgctatggtcgccggtgtcgggtttgcccttgttatcggcgct
tttgtactttggggaccttcgcctaggcctaggcgaagaggccaaattattggactcacc
aatctaggatacacttgtttcatgaacgcgcttctccagtctctagcagcgtgtccaatg
tttgtcggctggcttcggacgcagcttgtcaacaatgaaaatggccaatttgcccggagc
cttctctccattctagataaggtaaatggcttctgcgacgaaatgatatatggagacgta
acaccaattgaaataataacgtcccttggaccactatggatcttcacacctggacaccaa
gatgctcacgagctattccacgttgtactcggtgctctgcaggctgaaatgcagccactt
aacagaaaaggttgtctgtcggacgccttgcctaaaactgacattcctgtgacgtccgat
attaggggatccggcgatccatttgggatgcggacaagtgtgtcttgcaacgatattaca
aggaaagatgaggctcgagaatcagatgtacacaatacctgtcttcccgatcaaatgaca
gcctccactaagtcgattccaaaagcattcggtagttccattgacggcgcaaagccagga
atgattattgcccggtcttctgaggtgatatccagagatggtgaaggagaaaactcgaaa
gcagctttcccttttcgagcatggaattctctctgcacaattcctggccctagcattcct
gccatgtcaaacgtgacgcatcccttctcaggacttcttactagccaattacagtgcaca
aattgcaactggaagtcttccgtccattatgacaaatttgaaagcgtttccttaccatta
ccgccagccagtaacactctggcttggcggcgtcacacactggctgagttgttgtcacgt
tttgtgaccagcgaagtgatccatgatgtacaatgtgatggatgtggcttgcgatgtccg
gctgtcaagactctgacactgggaaaattaccaaaatgcttgtgtcttcatattcccaga
acaacttggggtccatcaggggcgcctgtaaaaagagacgatcctataatatttccagaa
atattaatactcgatccttttacgtttactgaagctaagaagaggaattctcagggcaaa
ccgcaagcgatgatcggtatgctggaccaaaattcaggcattggcaggaacaggaatagg
tacaaattgcagtctgtggtagagcatcgcggtcctgtagacgccgggcactttgtatct
tatcgacgaggaaacaggcccggccaatggatgtacacgtcggatgtaacggtagaatgt
acgacactgacagatgtattgtgtgccagtccgtacttgcttttctacgaacgaattaac
ggatcttaa
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