Neodiprion pinetum (white pine sawfly): 124219092
Help
Entry
124219092 CDS
T08966
Symbol
RfC4
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03030
DNA replication
npt03410
Base excision repair
npt03420
Nucleotide excision repair
npt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124219092 (RfC4)
03410 Base excision repair
124219092 (RfC4)
03420 Nucleotide excision repair
124219092 (RfC4)
03430 Mismatch repair
124219092 (RfC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npt03032
]
124219092 (RfC4)
03036 Chromosome and associated proteins [BR:
npt03036
]
124219092 (RfC4)
03400 DNA repair and recombination proteins [BR:
npt03400
]
124219092 (RfC4)
DNA replication proteins [BR:
npt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124219092 (RfC4)
DNA Replication Termination Factors
ELG1-RFC complex
124219092 (RfC4)
Chromosome and associated proteins [BR:
npt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124219092 (RfC4)
DNA repair and recombination proteins [BR:
npt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124219092 (RfC4)
Check point factors
HRAD17(Rad24)-RFC complex
124219092 (RfC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
RCF1-5-like_lid
AAA_24
AAA_16
Mg_chelatase
Rad17
AAA_11
Viral_helicase1
RuvB_N
AAA_19
nSTAND3
AAA_assoc_2
AAA_18
MeaB
ABC_tran
AAA_5
IstB_IS21
NTPase_1
DNAX_ATPase_lid
MipZ
AAA_28
AAA_23
RNA_helicase
AAA_29
AAA_25
FtsK_SpoIIIE
AAA_30
Motif
Other DBs
NCBI-GeneID:
124219092
NCBI-ProteinID:
XP_046482193
LinkDB
All DBs
Position
5:complement(5272341..5276299)
Genome browser
AA seq
350 aa
AA seq
DB search
MAGTDENGEPMDVEVVPSTSGINQKSKSSYRAAHLPWVEKYRPQVFSDIVGNEDTVARLS
VFAQNGNAPNIIIAGPPGVGKTTTILCLARVLLGPAFKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPQGRHKIIILDEADSMTDGAQQALRRTMEIYSNTTRFALACNNSEKIIEPI
QSRCAMLRYGKLSDAQVLAKIIQVCEKENASYTDDGLEAIVFTAQGDMRQALNNLQSTHN
GFGHVNGENVFKVCDEPHPLHVKEMLELCSKGNIDKSFGIMSHLWRMGYSAEDIIGNIFR
VCKNLDIDEKMKLDFIKEIGLTHLGIVNGMNSLLQMQSLLARLCRIALKK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaccgacgaaaacggcgagccgatggacgttgaggtcgtgccgtcaaccagc
ggcataaatcagaagagtaagtcgagttacagagccgcgcatttgccatgggtggaaaag
tatcgtccccaagtgttttcagacatagtgggcaacgaggacactgttgcacggttgtct
gtttttgcccagaacggtaatgcgccgaatataatcatcgccgggccgcctggagtggga
aagacgacgaccatcctctgtttagcccgggttcttcttggaccagctttcaaggatgct
gttcttgagctcaacgcgtctaacgacagaggaatcgacgtcgtgcgaaacaagatcaag
atgtttgcccagcaaaaggtcacccttcctcaaggcaggcacaagataatcatactcgac
gaagcggacagcatgaccgacggtgctcaacaagccctacgccgaaccatggagatctac
agcaacaccaccaggttcgcgctcgcttgtaacaacagcgagaaaatcatcgaacccata
cagtcgcgatgcgctatgttgcggtatggaaaactgtccgatgcccaagtcttggccaaa
atcattcaagtctgcgaaaaggagaatgcgtcttataccgacgatggattggaagcaatt
gtgttcactgcccaaggagacatgagacaagcattgaacaatttgcagtcgactcacaat
ggattcggacatgtgaacggagaaaacgtgttcaaggtttgcgacgaaccgcatcccctt
cacgttaaagaaatgcttgaattatgctcgaagggaaacattgataaatcgtttgggata
atgtcgcatttatggaggatgggatactctgctgaggatattattggaaacatattcaga
gtctgcaaaaatctcgatatagatgagaaaatgaagcttgatttcatcaaggaaatcggt
ttgacgcatttaggcatcgttaatggaatgaacagtctacttcaaatgcagagtcttttg
gcccgtctgtgccgaatagctcttaaaaagtaa
DBGET
integrated database retrieval system
