Neodiprion pinetum (white pine sawfly): 124219103
Help
Entry
124219103 CDS
T08966
Name
(RefSeq) laminin subunit beta-1-like isoform X1
KO
K05636
laminin, beta 1
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124219103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
F5_F8_type_C
LAMB1
MpsC
Motif
Other DBs
NCBI-GeneID:
124219103
NCBI-ProteinID:
XP_046482220
LinkDB
All DBs
Position
5:complement(33179979..33188651)
Genome browser
AA seq
1817 aa
AA seq
DB search
MVRPNQLIAIVFGLFLVILADTTSPPYYRRVSNRVQSRPAVVETVQRGDMSPSEAFGENQ
YSWSRVTTMRPRGVLLKKPQPCEVGSCYPATGDLLIGRENRIRASSTCGLKGPERYCIVS
HLQDRKKCFFCDKRIPKQQHGVENIVHKYQPNHRAAETWWQSENGVENVTLQLDLEAEFH
FTHIIIKFKTFRPAAMLIERSYDFGKTWQVYKYFAYNCQQSFPGVSTKASRNLTDVVCES
RYSNVAPSEGGEIIHRVLPPNLQIDNPYSKEVQNLLKMTNLRINFTRLHTLGDDLLDNRA
EIREKYYYAIKNMWVRGSCSCYGHASRCLPLPGIPERQDMVHGRCECTHNTKGLNCEYCE
DFFNDLPWKPAVGKQTSACKMCNCNNHSQSCHFDEAVFERSGRVSGGVCDDCQHNTRGQN
CEQCKPFFYHESSRDMTDAEACQPCDCDPSGSLDDGICDSRTDELSGDESGRCHCKANVE
GRRCDRCKNGFWKFDFNNPDGCQACTCNTVGTIGNQGCNMLTGECTCKRYVTARDCSQCL
PEYWGLSEEQDGCKPCDCDLGGAYDNFCDVVTGQCRCRRNIGGRTCNEPEQSYYTVSLDF
LIYEGENSRASSNCQIVIREPYRDGRNTTWTGSGFIRAYEFSNLTFVIDDIVKTMEYDIV
VRYEPEIAGPWQKVRIFIERDGPVDPDGPCRNWQPSDDRVTMQLYPDRHSAVAIRNACLE
SGKRYIVHLTFDAYDQRYQTPSASILIDSITLIPRPESIPVFSGSPLAEVRRQEYEAYRC
GDMFYDLYDRDQQISDICKQYQYIIGTYVFDGGHACECNLTGSHSLLCNQFGGRCSCKTN
VIGRRCDSCAPGTYNFGPEGCKPCDCDAVGALDNFCNVETGRCTCHPNTYSRTCGLCQPG
FWNFPHCRRCECNGHADSCDSKTGACINCQDSTTGHNCDMCIATFYGDPRIGVDIPCRQC
PCPGAIASGHSYADSCSLDSITQDVVCECYEGYASPRCETCDDNYYGNPDVPGGSCTPCD
CSNNTDPARPGNCDPKTGECLQCLFDTAGSHCQICKPQYYGDALEKNCKFCECNVLGTDQ
SAGPCNHRSGQCPCLPHVMGQFCDHCEENHWRIASGEGCDPCECDAIGSISDKCNEYDGT
CECRPGFGGRQCNECQKNHWGDPNIECKTCECSSLGSATPQCDRQTGACVCYEGIGGVKC
DHCDRGYLGFAPTCRPCGECFDNWDMTLQGVRNRTSNVITDASRIKKVGITGFYTSEFDQ
MDDSLNQVKALVSDTSVRGQDLEKLSDRAADLKNVIQASQMRLDELDNLQDSVSQRVHLA
DAALKNMRNRTDNLHQDAAQLKKDATKLQEANVQGALNVTVEMAEQSNEAERMANGTLNT
LAEAERYHTNTENFLSKNSLSFKEATDQNKESIARLGDQVTTIKSMLPDLNLEVCGERVT
ECSSLCGGAGCGSCGGLSCDAGAVAKVNLALDLADKQTAAIKNHRDKAEQLLRSMSQVQQ
EAIAARSNAQDAFNHALSVRNKTDGLSADLTALTDRMWNFLTEEQSTPAEVRDLAKKALS
KNIHSNPEQIKELAQNISLMVGSLTNPEKIIAEAADGLRRANQLRERANATKNEAIAKEV
QAEKITKLLTDAQSAQDNADNAVRKATDDIAQSQAHLTTIIQGMKMAKDTAGKLTASVGA
LDSRLENLQTQLIKDDYILNEEIAKQVAEVVLEAGTVDNKTMKLRQEYQQAKNSLGNRVD
RSKGNIEKAKSLLARASELTADTSTKFKDLDGMEIVYKDNERKLSRLMDIVDSLTNEMEQ
HLKEIDTKSIRYRQCST
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atggttcggccaaatcagctcatcgccattgtttttggtttatttctggttatactagca
gatacgacgagccctccttactaccgacgagtatcgaacagagtgcaatcgagaccagct
gttgtagaaaccgtgcagagaggagatatgtcgccgtcagaagctttcggcgagaatcag
tatagttggagccgggtgacgacaatgaggcccagaggtgtgcttctaaagaaacctcaa
ccctgcgaagttggctcgtgttatccagctactggagatttgttaatcgggcgagaaaat
cgaatccgtgcttcgtctacctgcggtttaaaaggacctgaaagatactgcatagtttct
caccttcaggataggaaaaaatgtttcttttgtgacaaaagaatcccaaagcagcaacac
ggggttgaaaatattgtccacaaataccagccaaaccatcgcgctgcagagacttggtgg
cagtcggaaaatggtgtggaaaatgtaacactgcagctggacctggaagcggaattccat
ttcacccacataatcataaaattcaagacgttcagaccagctgcaatgttgatcgaacgt
tcttacgactttggcaagacctggcaggtgtacaaatactttgcctataactgccagcag
tcattccctggcgtgtcgacgaaggcatctcggaacttgacggatgtcgtgtgcgaatcg
cgatattccaacgttgctccatcagaaggtggtgagataatccacagagtgctgccaccg
aacctgcaaatcgacaacccgtactcgaaggaagttcagaatcttttgaaaatgaccaac
ttgcggatcaacttcacaaggctgcacactttgggtgacgacttgttggacaaccgcgca
gagatacgagagaagtattactacgccataaaaaacatgtgggttcgaggatcctgctcg
tgctacggacacgcgtcgaggtgtctacccttgcccggaatacccgaaaggcaggacatg
gttcatggccgttgtgaatgtacgcacaacaccaagggactgaactgtgaatattgcgag
gacttcttcaacgatttaccgtggaaacctgcggttggaaagcaaaccagtgcctgcaag
atgtgcaactgtaacaatcacagtcaaagttgtcatttcgacgaggccgtcttcgagcga
tctggaagagtttccggcggtgtttgtgacgactgtcagcataacactcgtgggcaaaat
tgtgaacagtgcaagccattcttctaccatgagtccagtagagatatgactgacgctgaa
gcttgccaaccctgtgactgcgatccctccggttccttggatgatggaatctgcgactca
cgcactgacgagttaagtggtgatgaatctggccggtgtcactgcaaggccaacgttgaa
ggcagacggtgtgacagatgtaagaatggattctggaaattcgactttaacaacccggac
ggatgtcaagcgtgtacctgcaacactgtcggaacgatcggtaaccaagggtgcaacatg
ctgacgggcgaatgcacctgtaagcgttacgtaaccgcacgtgactgcagtcaatgtctc
ccagaatattggggtctttccgaggaacaagacggctgtaagccatgcgattgtgacctt
ggtggagcctacgacaatttctgtgatgtcgtgacaggccagtgccgttgcaggcgtaac
ataggtgggcgaacctgcaatgagccagagcaaagttactacactgtttccttggatttt
ctcatttacgaaggagagaatagtcgagcatccagcaactgtcagattgtgatcagagag
ccctaccgtgacgggagaaacaccacgtggactggcagtgggttcatcagagcttacgaa
ttctcaaacttgaccttcgttatagacgacatcgtgaaaaccatggagtacgacatagtc
gtgcgatatgaacctgagatcgcagggccctggcagaaagtgcgaatctttatcgaaaga
gacggtccagtcgaccctgacggaccctgtagaaattggcagccttctgatgaccgtgtc
acaatgcagctctatcctgacagacatagtgccgttgcaattagaaacgcctgtttggaa
tcaggaaagagatacatcgtacatttgacttttgatgcatacgaccaacgttaccaaaca
ccgtcggcatctattctaattgattcgatcacgttgatccctagaccagagagcataccg
gtcttcagtggatccccacttgcggaagtgcgccgccaagaatacgaagcttaccgatgc
ggtgatatgttttacgacttgtacgatagggaccaacagatttccgatatctgcaaacag
tatcagtatatcattgggacgtatgtgttcgacggtggtcatgcatgtgaatgtaacctg
actgggtcacacagtctgctttgcaatcaattcggaggcagatgttcctgcaaaacaaac
gtgatcggtcgtcgatgcgatagttgcgcacctggaacctacaattttggaccagaaggc
tgtaagccgtgcgactgtgacgccgtgggagcgttggacaacttctgcaacgttgagacg
gggcggtgcacttgtcacccgaacacgtactccagaacgtgcggcctgtgtcaaccaggc
ttttggaacttcccacactgcagacgatgcgagtgcaacggtcatgccgacagctgcgac
tcgaagacgggagcttgcataaactgccaggactcaacgacgggccacaactgcgacatg
tgcatagcgacattctacggtgacccacgtatcggcgtcgacatcccttgcaggcagtgt
ccatgtccgggcgccatagcatcgggtcattcatatgcagacagctgctcactggattcc
ataactcaagacgtggtttgcgaatgctacgaaggttacgccagtccgagatgtgaaacc
tgcgacgataactactatggaaacccagatgttcccggtggcagttgcacgccatgcgat
tgtagcaataacactgacccggctcgaccgggcaactgcgatccgaagaccggggaatgc
ctccagtgtttgtttgacaccgctggctcacactgccagatttgcaagccgcaatattac
ggcgatgccttagagaaaaactgcaaattctgcgagtgtaatgtacttggtacagatcag
agcgcgggcccctgtaatcaccgatcgggacagtgtccgtgtctcccgcatgtcatgggt
cagttctgtgaccactgcgaagagaaccattggcgaattgcaagcggagaaggctgcgat
ccgtgcgaatgtgacgcgattggaagtatttcagacaaatgtaacgagtacgatggaact
tgcgagtgcaggccaggtttcggtggaaggcagtgtaacgagtgccagaagaatcactgg
ggcgatccgaatattgaatgtaaaacttgcgagtgcagttcccttggttcagccacgccg
cagtgtgacagacaaaccggggcttgcgtgtgctacgaaggtatcgggggcgtaaagtgc
gaccactgtgatcgaggctacctcggttttgctccgacctgccgcccttgcggagaatgt
ttcgataattgggacatgactcttcaaggagtgaggaatcggacaagcaatgtaatcaca
gatgcttcgagaatcaaaaaggttggtataaccggattctacacgtccgagttcgatcaa
atggacgactcgttgaaccaagtcaaggctctggtgagcgataccagcgtaagaggacaa
gacctggaaaaattgagcgacagggcggcggatctgaaaaacgtcattcaggcatctcag
atgagacttgacgagctcgacaacctccaggacagtgttagtcaacgagtgcatctcgcc
gacgctgccctcaaaaacatgaggaataggacggacaatctgcatcaagacgctgcgcag
ttgaagaaggacgcaacgaagttacaagaggctaacgtgcagggggctctgaacgtcacc
gttgaaatggccgagcaatcgaacgaggctgaaagaatggccaatggtacattgaacacc
ttggccgaggctgagcggtaccatacgaacacggaaaatttcctcagtaagaattccctc
agcttcaaggaggccacggatcaaaacaaggagtccattgctcggcttggcgaccaggtg
accaccataaaatccatgctgcctgatttaaaccttgaagtttgcggagagcgcgtcact
gagtgtagttcactgtgcggtggagctggatgtggttcttgtggaggattgtcttgtgat
gctggagccgtagcaaaagtcaacttggcactggatctggccgataagcaaacagcggcg
atcaagaatcatcgggataaagctgagcaactactgaggagcatgtctcaagtacaacaa
gaagcaatcgcagcaagatcgaacgctcaagatgcgttcaaccatgccttgtccgtaagg
aacaagacggacggattgtccgccgatttgacagcgctcaccgacaggatgtggaatttc
cttacggaggaacaatcaaccccagctgaggtcagagacctggcgaagaaggcattgagt
aaaaacattcactcgaatccagaacagatcaaggaactcgcgcagaacatatccttgatg
gttgggtcgctgacgaatcccgagaaaatcatcgccgaagcagccgatggtttgaggcgg
gctaaccaactgagagaacgagccaacgcgacgaagaacgaggcgatagccaaggaagtg
caagccgaaaagataaccaagctattgactgacgctcagtcggctcaggacaatgctgac
aatgctgtaagaaaggcaacggacgatattgctcagtcccaagcgcacttgaccacgatt
attcagggaatgaaaatggccaaggacacggccggcaaattaaccgcgagcgtcggcgcc
ttggattcgagactcgagaatcttcagactcagctgataaaggatgactacatacttaac
gaggagattgcaaagcaggttgctgaagtggtcctggaagctggaacagtcgataacaag
acgatgaaactgagacaggagtatcaacaagcaaaaaattcactagggaaccgagtcgac
aggagtaaaggaaacatcgagaaggcaaaatcacttttggcaagggcgtctgaattgacg
gccgatacttcgaccaagttcaaggacctcgacggtatggagattgtgtataaagacaac
gagagaaaattgtctaggctcatggatatcgtcgactctttgacaaacgaaatggaacaa
catttgaaggaaattgatacgaagtccataaggtaccggcaatgttccacttaa
DBGET
integrated database retrieval system
